Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00197 ATGATTCAAGCTGTTCTCCAAGATGCTGAAGAGAGGCAGATAAAGAGTAATTCTGTGAAGCTTTGGCTGCAGGATCTTTCAGATGCAGCATATGTTTTAGATGATATCTTGGAAGATTGTTCAACACAGTCAAACCTGCTACAACTTGAGCAAACAAGCTCTGGGGTTGTAAGAAAGGCACACGGCACATGGTTGGCCTCTTTGCATCCCAAGTCACTTTATTTCCGCCGTGACGTCGCCAAGAGGATGAAAGAGATCACTAACAGGCTCCATGAGATTGATGAAAGAAGGAAGATGTTTAAGTTGCGTACAGGTGTCATAGGGAGGCAACAGGAAGATGATCAACAGGGTCAAACTATTTCTGCCATCCCTGAGCACCAGATGTATGGAAGAGACCAAGATAAACACAAGATTGTGGAGTTTCTCACCAAGCATGCCAGTGGCATTGATGGCCTCTCTGTGTATCCCATTGTTGGCATGGCAGGACTTGGAAAAACAACACTTGCTCGATGGGTCTTCAATGACGAGAGGGTGATCCAGCATTTTGATTTGAGAATTTGGGTTTGTGTTTCCACAAACTTCAATATGATGAGAATTCTACAGTCCATTGTAGAATCCTCCACCGGAGTGAACCCAAACCTCTCCACTTTAGAAGCAATGCAAAACAAAGTTCAACAAGTACTGCTGGGAAAACGGTATTTGCTCGTTCTAGATGATGTGTGGGACAATGTCAAATGGGAGGACTTGAAGTCTGTGCTGAATTCTAGAGGTAGTGAAACCAAAGGTGTTTCAATTTTGGTCACAACACGTGATCAGATTGTTGCATCTGCCATGGAAACATGCCCTACTCAATCTCATCACTTACAGCCATTACCTAAGGATGACAATTGGTCATTGTTCACACACTATGCATTTGGTCCAAACAAGGAGCAGCCTGCAAAGCTGGTGGAGATTGGAGAGGATATCGTCAGAAGATGTGTGGGTAATCCCCTTGCATCCAAAGTTGTTGGAAGCCTTTTGCATGATAAAAAAGAGGAAAAAGAATGGCTCAATGTGTTGGAAAGTAAGTTTTGGGACATCGATGCTGTCATGGGTGCTTTGAGACTAAGTTATTTTCATTTGAAGCCATCATCACGGCAATGCTTTTGTTTTTGTGCTCTCTATCCTGAAGATTTTCGAATCTCAAAGGAACAGCTAATTCATCTTTGGATGGCCAATGGACTAATTAAATCCAAAGGGCATTTGGAGGTTGAAGATGTTGGTAACCAGCAATGGGAGGAGCTGCTCCAGAGATCATTTTTTCAAGAAGTATCGACTGACAAGTTTGGAAACACCACCTTCAAGATCCATGATTTATTCCTTGATCTTGCCCACTCCATAGTGGGAGAAGAGTATAAAGCTTATGGTGAGTCTGCAAGCTTGACCAATTTGTCAACAAGGGTCCACCATGTAAGTTACTCTGGCTTGCCTGAGTTAAATCAGAATACCTTGAAGAATATTGAGTCCTTGAGGACTGTTATTGATCTTGAACCAGCAATTAGCAGTCCCATCATTAGATATCCAGCATTGATTTTGCATAAAGTGCAGTTATGTAATTCTCTCCGAGCATTGCGTACAGGATCTTCTGAACTCTCTGCACTGAAAAGTTTAACACATTTGAGGTACTTGAATATTTACAATAGTTACATTACAAAGTTGCCAAAATGTGTTTCTAGGCTGCAGAAATTGCAAATTCTAAAGCTAGAACATTGCTATTTACTTACTTGTCTGTCCAAACACATATTGAAGCTGAAGGATCTCAGGCATCTCTTAATTGATGGATGTCCGTCATTAATAGAAATGCCTCCAAAAATGGGGGAGTTGAAACAACTGAAAACACTGAATATTTTTATTGTGGATTCAAAAGCCAAACATGGCTTAGCAGAGTTACATGATTTACAGCTTGGTGGTAGACTACACATTAAAGGTCTCGAGAATGTCCAGAGCAAATATGATGCTAGAGAGGCTAATTTGATGAGTAAGAAGGAGCTGAGTTATTTATATTTGTCTTGGCATTCTGATTCTAATTCAATCTGTGTTAATGCTGAGAGAGTACTTGAAGCCCTTGAGCCTCCCCCTAATCTCAAGAATTTAGGGATTAATGGTTATAGGGGATCACAATTCCCTGGTTGGGTGAGAAATACTAACATCTTTTCAAGCTTAGTTAATGTTATACTCTTTGACTGCAACAACTGTGAGCAGATTCCTCCACTTGGTAAATTACGACATTTAGAAAGTCTTTATGTATGTGGTATGAAAGATGTGAAGTACATTGATGAAGACTCGTATGATGGAGTGGAGGAGAAGGTGGCCTTTAAGTCCCTAAAGGAGCTAACTTTGATAGACTTGCCAAAGTTAGAGAGGATTTTAAGGGACGAAGGAGTAGAGATGCTCCCACTTGTTTCCAAATTAACCATTCCATGCAGCCCCAATTTGAAGTTACCAATCCTTCAATCCGTGGAGGTACTTGAAATTAAAGGATTGAAATCTGACAATGAAGACATGGCTTCCTTTCCGGAAGAAATCTTTCTGAGTATGCGTTATGTTAAACAGCTCACGATTAGTAGCTTTCGCAAACTGAAGGTTTTACCTCAAGAACTGGGCACCCTTAGCTCACTCCAGAAACTGCATATTCATGATTGTGTTGAGCTTGAGTCCTTGGCAGAGAATGTTTTTCAAGGCTTGAGTTCTCTTCGAAGATTGATCATTTCCGATTGTCAAAGACTAAAATCCTTGTCTAGTGTTGTGGAACACCTAACTTGTCTCGAGTCCCTTCGTATCTTGTTTTGCCCAGAATTGACGACTCTGCCAACTAACATGAATAAGCTAACTGCCCTCCATCATGTTTTTATCGAGGGTAGAGTACCAGAAGGTCTTCAATGTATCCCATCCCTCAAATCTCTGGTGCTAGTTGAAATGGATTCATTGCCAGAGTGGTTGGGAGATATGACATCTCTGGAACACTTATACAATGATTTTCAGTTGAACAAATTCTTATTTGCCAAATTATATTGCATGTGA 3060 0.4085 MIQAVLQDAEERQIKSNSVKLWLQDLSDAAYVLDDILEDCSTQSNLLQLEQTSSGVVRKAHGTWLASLHPKSLYFRRDVAKRMKEITNRLHEIDERRKMFKLRTGVIGRQQEDDQQGQTISAIPEHQMYGRDQDKHKIVEFLTKHASGIDGLSVYPIVGMAGLGKTTLARWVFNDERVIQHFDLRIWVCVSTNFNMMRILQSIVESSTGVNPNLSTLEAMQNKVQQVLLGKRYLLVLDDVWDNVKWEDLKSVLNSRGSETKGVSILVTTRDQIVASAMETCPTQSHHLQPLPKDDNWSLFTHYAFGPNKEQPAKLVEIGEDIVRRCVGNPLASKVVGSLLHDKKEEKEWLNVLESKFWDIDAVMGALRLSYFHLKPSSRQCFCFCALYPEDFRISKEQLIHLWMANGLIKSKGHLEVEDVGNQQWEELLQRSFFQEVSTDKFGNTTFKIHDLFLDLAHSIVGEEYKAYGESASLTNLSTRVHHVSYSGLPELNQNTLKNIESLRTVIDLEPAISSPIIRYPALILHKVQLCNSLRALRTGSSELSALKSLTHLRYLNIYNSYITKLPKCVSRLQKLQILKLEHCYLLTCLSKHILKLKDLRHLLIDGCPSLIEMPPKMGELKQLKTLNIFIVDSKAKHGLAELHDLQLGGRLHIKGLENVQSKYDAREANLMSKKELSYLYLSWHSDSNSICVNAERVLEALEPPPNLKNLGINGYRGSQFPGWVRNTNIFSSLVNVILFDCNNCEQIPPLGKLRHLESLYVCGMKDVKYIDEDSYDGVEEKVAFKSLKELTLIDLPKLERILRDEGVEMLPLVSKLTIPCSPNLKLPILQSVEVLEIKGLKSDNEDMASFPEEIFLSMRYVKQLTISSFRKLKVLPQELGTLSSLQKLHIHDCVELESLAENVFQGLSSLRRLIISDCQRLKSLSSVVEHLTCLESLRILFCPELTTLPTNMNKLTALHHVFIEGRVPEGLQCIPSLKSLVLVEMDSLPEWLGDMTSLEHLYNDFQLNKFLFAKLYCM 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00197 1019 PANTHER DISEASE RESISTANCE PROTEIN RP 2 902 IPR044974 GO:0006952
Adu05g00197 1019 Pfam NB-ARC domain 132 354 IPR002182 GO:0043531
Adu05g00197 1019 Coils Coil 76 96 - -
Adu05g00197 1019 SUPERFAMILY RNI-like 787 1003 - -
Adu05g00197 1019 CDD RX-CC_like 2 93 IPR038005 -
Adu05g00197 1019 SUPERFAMILY L domain-like 448 805 - -
Adu05g00197 1019 Pfam Rx N-terminal domain 1 51 IPR041118 -
Adu05g00197 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 385 IPR027417 -
Adu05g00197 1019 Gene3D - 377 459 IPR036388 -
Adu05g00197 1019 PRINTS Disease resistance protein signature 154 169 - -
Adu05g00197 1019 PRINTS Disease resistance protein signature 326 340 - -
Adu05g00197 1019 PRINTS Disease resistance protein signature 906 922 - -
Adu05g00197 1019 PRINTS Disease resistance protein signature 227 241 - -
Adu05g00197 1019 PANTHER OS05G0414200 PROTEIN 2 902 - -
Adu05g00197 1019 Gene3D - 1 98 - -
Adu05g00197 1019 Gene3D Ribonuclease Inhibitor 639 841 IPR032675 -
Adu05g00197 1019 Gene3D Ribonuclease Inhibitor 469 638 IPR032675 -
Adu05g00197 1019 Gene3D Ribonuclease Inhibitor 842 1016 IPR032675 -
Adu05g00197 1019 Gene3D - 110 283 IPR027417 -
Adu05g00197 1019 Gene3D - 291 375 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00197 Adu-Chr5 2167961 2171063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00197 157 629 WRKY Transcription Factor Family AT5G45050 22.587 3.87e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00197 - - ahf:112747502 1186.79