Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00171 ATGGCTGCAAATGTGAACTTTGACATGCCACATAACAGAATAAGCACCACGCTCATCACGTACCCTCATTGGTATTCACCAAAAAATGGAATTTACCGTAGCAAACACCTCTCTTTGGAGCTTCCCAAAGACCCTTTTACGGACCTTGTTTCCTTCGTCTTTTCCCACCGCCATAATGGGGTTTCAGCCCTTGTTGATTCCTCATCTGGGTCTTCAGTTTCTTACTCAAAGTTGCAACCTTTTGTCAAATCCATGGCCTATGGTCTTCATAAAATGGGTGTTTCACAAGGTGATGTGGTTCTGCTTTTGCTTCCAAATTCCATTTACTATCCCATTGTGTTCTTGGGTGTTCTGTGTTTAGGTGCTGTTGTTGCACCATTGAACCCTCTAAGTAGTGTCTCAGAGATACATAAACAAATCAAAGATTGTGGTGTGAGTTTTACTTTCACTGTGCCTGAAAATTTCAAGAAACTAGAACCATTAGGAATTCCCATTGTTGCTGTGCCAGAAAATGAGGAGGGTTTGAAGCTTGATTGTTTCTCATGTTTTAGTAACATGATTTCTGGTGAATTTGGTTTTTCGATGAGGCCAGTGATTCGACAGGAGGACACTGCTGCTATATTGTATTCTTCAGGGACCACTGGGGTGAGCAAAGGAGTTGTTCTAACACATAAGAACCTTATTTCTATGATTGAGCTTTTTGTGAGGTTTGAAGCTTCTCAATATGAATACTCTTGCTTGAACAATGTGTTTCTAGCTGTTCTTCCAATGTTCCATGTGTATGGTCTTTCGCTTTTCGCTTTGGGGTTACTGTCTTTGGGTTCCACAGTCATTGTAATGAGGAAATTTGACATTGATGAGGTTATCAATGCAATTGACAAGTTTAAGGTTACACACTTCCCGGTAGTTCCGCCTATGTTGACAGCATTGACAAGGAGAGGAAAGGGTGTTAATGGAAGTAATTTGCAGAGTTTGATGCAAGTCTCCAGCGGTGCAGCACCTTTGAATGAAAGTGTTATTGAAGACTTTGTGGAAACATTTCCTCATGTTGATTTTATACAGGGTTATGGAATGACCGAGTCGACTGCGGTAGGAACACGTGGCTTCAATACTGAAAAGTTGCACAACTATTTGTCAATAGGATTGTTAGCTCCAAACATGGAGGCAAGAGTTGTAGACTGGAGTAGCGGTGAATTCTTGCCTCCGGGAAGCAGTGGTGAGCTTTGGTTGAGAGGACCTGCAATCATGAAAGGGTACTTGAATAATGAGGAAGCGACGATGTCAACAATCGATAAAGATGGTTGGCTGCATACTGGCGATGTTGTTTATTTTGATCAGGATGGGTATTTGTATATTTCAGACCGCTTGAAAGATATCATCAAATACAAGGGCTTTCAGATTGCCCCTGCTGATTTAGAAGCTGTGTTAATCTCACATCCGGAAGTTGTTGATGTCGCAGTTACAGCTGCCATGGACGAAGCAGCCGGGGAGATCCCAGTAGCATTTGTGGTCAGGAAGGTTGGAAGCATGATTTCTGCAAAGCAAATAATAGATTATGTTGCTGAGCAGGTTGCTCCATACAAGAAGGTTAGGAAAGTGATCTTCATTAAAAGGATACCAAGATCTCCAACTGGGAAGATCCTTCGGAGGCAGCTTAGGAATTTCTCCACTTCTAAACTCTAA 1683 0.4201 MAANVNFDMPHNRISTTLITYPHWYSPKNGIYRSKHLSLELPKDPFTDLVSFVFSHRHNGVSALVDSSSGSSVSYSKLQPFVKSMAYGLHKMGVSQGDVVLLLLPNSIYYPIVFLGVLCLGAVVAPLNPLSSVSEIHKQIKDCGVSFTFTVPENFKKLEPLGIPIVAVPENEEGLKLDCFSCFSNMISGEFGFSMRPVIRQEDTAAILYSSGTTGVSKGVVLTHKNLISMIELFVRFEASQYEYSCLNNVFLAVLPMFHVYGLSLFALGLLSLGSTVIVMRKFDIDEVINAIDKFKVTHFPVVPPMLTALTRRGKGVNGSNLQSLMQVSSGAAPLNESVIEDFVETFPHVDFIQGYGMTESTAVGTRGFNTEKLHNYLSIGLLAPNMEARVVDWSSGEFLPPGSSGELWLRGPAIMKGYLNNEEATMSTIDKDGWLHTGDVVYFDQDGYLYISDRLKDIIKYKGFQIAPADLEAVLISHPEVVDVAVTAAMDEAAGEIPVAFVVRKVGSMISAKQIIDYVAEQVAPYKKVRKVIFIKRIPRSPTGKILRRQLRNFSTSKL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00171 560 Pfam AMP-binding enzyme 57 462 IPR000873 -
Adu05g00171 560 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 17 559 - -
Adu05g00171 560 Gene3D - 458 558 IPR045851 -
Adu05g00171 560 CDD 4CL 41 552 - -
Adu05g00171 560 ProSitePatterns Putative AMP-binding domain signature. 207 218 IPR020845 -
Adu05g00171 560 SUPERFAMILY Acetyl-CoA synthetase-like 58 555 - -
Adu05g00171 560 Gene3D - 30 457 IPR042099 -
Adu05g00171 560 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 559 - -
Adu05g00171 560 Pfam AMP-binding enzyme C-terminal domain 472 546 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00171 Adu-Chr5 1934825 1938190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00171 1 560 Monolignol Biosynthesis Gene Families AT4G19010 58.970 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00171 K01904 - gmx:100804808 850.121