Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00150 ATGAGCAAAGATTGGGTTCTTATTGTGTTTGTGATATTTCTTTCAAGTAGTGGAATATTATTCAGCAATAATGTTTGTGCAAAACCACCTCCTACTGTTAACATAGGAGCAATTTTAGCTCTCAACTCAACCATTGGAAAGGTGGCAAAAATTGCTATAGAAGCAGCAGTGAATGATGTAAATTCAGATTCAACCATTCTCAGTGGAACCAAGCTTAACATCTCTATGCAAGACACAAAACTATCAACTGGATTTCTAGGAATCATTGACTCATTGCTATTGATGGAGAAAGGCACTGCAGCCATAATTGGTCCACAATACTCAGTAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTTCAATTTCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTAGCAGATGTTATTGATCAATTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCACACAAAGCAGCCCTTAAGCCTGATGATAGCAATGTCAACAAGGAAGAAATCAATAGTGCATTAGTTAAAATTGCTTTAATGGAGTCTAGGGTTATAGTTCTTCACATTTACCCTTCTTTTGGCCTTGAAGTTCTTCATATTGCACAATCATTAGGCATGATGGGAAGTGGTTATGTGTGGATAGTCACTGATTGGCTCACAACTGCTCTTGATTCTGATCCATCATTGGCCACAACTTCAATCATGAATGATATGCAAGGTGTTATCACCTTGAGAATGTACACACCAGATTCAAGAATCAAGAGCAATTTTGAGTCTAGGTGGCCCAAACTAGCTCATCAAAATAATGATGAGGGTCCTTTTGGATTGAACATCTTTGGTTTATATGCTTATGACACTGTTTGGACCTTAGCTTATGCACTTGATGCATTCTTTAGAAGTGGTGGAACTTTGAAATTTTCAAATGATTCAAGTCTAAACACTTTAAGGGGTGATGGTGATACCCTTCATCTTGATACAATGGGAATAATGTTTCTAAATGGTAGCATGTTGCTTCAGAAGATTCTAGAAGTTAATCGAACGGGTTTAACAGGTCAAATGATGTTTTCTCAAGGTGGAAACCTAATGAATCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATTTTGGTCTAATGCTTCTGGCCTTCACACTGGTGAACAAGTTCCAAACCATGCAAATTCAAGTGAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCCAACAATGGAAAACAACTGAGAATTGGGGTGCCACTTAGGGTTAGCTACCATGAATTTGTGTCAAGAACTAAAGGCACTGACAAGTTTAGTGGTTATTGCATTGATGTGTTCACAGCTGCATTGGAATTGTTGCCTTATCCAGTCCCAAATAAGTTTATTCCATTTGGTGATGGTAAAACCAATCCATTGAATTCACTACTTCTTCAGAGGGTCACACTTGGTGAGTTTGATGCTGTGGTGGGGGACATTACCATTACCACAAACAGAACTAAAATTGTGGATTTCACACAACCATATATTGAATCCGGTTTAGTTGTTGTGGCACCAATAAGGAAGATGAAATCTAATGCTTGGGCCTTTCTAAGACCATTTACTCCAATGATGTGGCTTGTCACAGGAATGTTTTTCTTAGCTGTTGGGGCTGTTGTTTGGATTTTAGAACGTCGCTTGAATGATGATTTTAGAGGCACTCCTAGGAGACAATTTGTCACCATTATATGGTTTAGCTTCTCAACCTTGTTCTTTGCACATAGAGAGAAAACTGTTAGCACTCTTGGCCGATTAGTCTTAATCATATGGCTCTTTGTGGTTTTAATACTGAATTCAAGCTACATTGCAAGCCTAACATCAATCCTCACAGTAGAACAACTCTCTTCCCCAATTAAGGGGATTGAAAGCTTAGCAACAAGCAATGAACGAATTGGTTACTTGAGAGGATCATTTACCGAGAATTATCTAACAGATGAACTCAACATACATAGGTCAAGGCTTGTTCCTCTCAATAACCCTTCAGAATATGAGAAGGCGTTGAAGGATGGAGCTGCTAATGGTGGTGTTGCTGCAATCATAGATGAACGTGCATACATGGAGTTGTTCCTAGCAACTAGGTGTGAATTTGGGATTGTTGGTCAAGAGTTTACCAAGATGGGATGGGGCTTTGCCTTTCCAAGAGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTATCAGAGAATGGTGATCTTCAAAGGATTCATGACAAATGGCTAACAAAAAGTGCTTGTAGCTCAGAAGGTGCAAAACAAGGCATTGATAGGCTTGAGACTAAGAGCTTTTGGGGCCTCTTCCTTCTTATTGGCATTGCATGCTTCATTGCTCTCCTTTGCCATGTTATTAGAATGACCTACCGTTTTAATAGGCATTATTCAAACAACACTATTAGTAATGACAACCTTGGAGGCTCATCATCATCTTCTTCTTCTTGTTCTTCTCGTATCAAATCTTTCTTTTCATTTGTCAATGGAAGAGAAGAGGAAAAAGAGATGGAAGATAAAAATGGGAAAAAGAGAAGGCGCAAAGATAATAGAGTGGCTCATGAAGTAGAGGTTTCACCATTGCATGAATCAAACGTTAGCAGCCATGTTGAAAATGGTGCCTAA 2832 0.3905 MSKDWVLIVFVIFLSSSGILFSNNVCAKPPPTVNIGAILALNSTIGKVAKIAIEAAVNDVNSDSTILSGTKLNISMQDTKLSTGFLGIIDSLLLMEKGTAAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADVIDQFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISHKAALKPDDSNVNKEEINSALVKIALMESRVIVLHIYPSFGLEVLHIAQSLGMMGSGYVWIVTDWLTTALDSDPSLATTSIMNDMQGVITLRMYTPDSRIKSNFESRWPKLAHQNNDEGPFGLNIFGLYAYDTVWTLAYALDAFFRSGGTLKFSNDSSLNTLRGDGDTLHLDTMGIMFLNGSMLLQKILEVNRTGLTGQMMFSQGGNLMNPSYEIINVIGTGVRRIGFWSNASGLHTGEQVPNHANSSEGLYGVIWPGQTTQTPRGWVFANNGKQLRIGVPLRVSYHEFVSRTKGTDKFSGYCIDVFTAALELLPYPVPNKFIPFGDGKTNPLNSLLLQRVTLGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKMKSNAWAFLRPFTPMMWLVTGMFFLAVGAVVWILERRLNDDFRGTPRRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPIKGIESLATSNERIGYLRGSFTENYLTDELNIHRSRLVPLNNPSEYEKALKDGAANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTKSACSSEGAKQGIDRLETKSFWGLFLLIGIACFIALLCHVIRMTYRFNRHYSNNTISNDNLGGSSSSSSSCSSRIKSFFSFVNGREEEKEMEDKNGKKRRRKDNRVAHEVEVSPLHESNVSSHVENGA 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00150 943 SUPERFAMILY Periplasmic binding protein-like II 450 817 - -
Adu05g00150 943 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 46 62 - -
Adu05g00150 943 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 107 135 - -
Adu05g00150 943 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 328 340 - -
Adu05g00150 943 PIRSF IGluLR_plant 2 941 IPR017103 -
Adu05g00150 943 Pfam Bacterial extracellular solute-binding proteins, family 3 486 815 IPR001638 -
Adu05g00150 943 Pfam Receptor family ligand binding region 51 418 IPR001828 -
Adu05g00150 943 PANTHER GLUTAMATE RECEPTOR 25 913 - -
Adu05g00150 943 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 25 913 - -
Adu05g00150 943 Gene3D - 464 583 - -
Adu05g00150 943 CDD PBP1_GABAb_receptor_plant 34 433 IPR044440 -
Adu05g00150 943 Gene3D - 730 821 - -
Adu05g00150 943 MobiDBLite consensus disorder prediction 901 943 - -
Adu05g00150 943 Gene3D - 51 408 - -
Adu05g00150 943 SMART GluR_14 475 816 IPR001320 GO:0015276|GO:0016020
Adu05g00150 943 CDD GluR_Plant 472 814 - -
Adu05g00150 943 SUPERFAMILY Periplasmic binding protein-like I 27 465 IPR028082 -
Adu05g00150 943 Gene3D - 584 719 - -
Adu05g00150 943 Gene3D - 149 433 - -
Adu05g00150 943 Pfam Ligand-gated ion channel 816 847 IPR001320 GO:0015276|GO:0016020
Adu05g00150 943 MobiDBLite consensus disorder prediction 901 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00150 Adu-Chr5 1716921 1722219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00150 1 930 Ion Channels AT1G42540 56.751 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00150 K05387 - gmx:100790502 1454.88