Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00147 ATGGGCAGCAGTGAGATGGATAAAACACCAAAAGAGAAGGAGTCAAAGACTCCTCCACCTGCTTCACAGGAGCAATCTTCAGCCACCAGTACCGGAGCCGTTAATCCCGAATGGTCCAGTTTTCAGGCATATTCTCCTATACCTCCACATGGGTTTATGGCATCAAGTCCCCAAGCCGCCCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTACGGCACTCCAACACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGCCCTTTTCCCATGCCTTCTCCAAACGGTATTGCTGAGGCTTCAGGAAATACTCCTGGCAGCATGGAAGCTGATGGAAAGCCTCCTGAGGTGAAGGAAAAACTGCCAATCAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAACATGATTACAGGGAAAAATAATGAGCCCGGTAAAACAGGGACTTCTGCTAATGGAATTCATTCAAAGAGTGGTGAGAGTGCAAGTGAAGGTAGCAGTGAAGGAAGTGATGCTAATTCTCAGAATGAATCTCAATTGAAATCAGGGGGAAGACAGGATTCTTATGAAGATGAACCATCTCAAAATGGCAGTTCGGCGCATGCTCCTCAAAATGGGGGGATTAATACACCTCATGCGGTTGTTAATCAAACCATGTCTGTCATACCTATCACTGCAGCCGGTGTTCCTGGAGCTGTTCCTGGTCCCACAACAAACTTGAATATAGGAATGGATTATTGNNNNNNNNNNNNNNNNNNNNGAGGGATGGTTGCTGCTGGATCACGAGATAGTGTTCAGTCACAACTTTGGCTACAGGACGAAAGAGAGCTTAAAAGACAAAGGAGGAAGCAGTCTAACAGGGAATCTGCTCGAAGATCCAGATTGCGCAAGCAGGCTGAGTGTGATGAGCTAGCTCAGCGTGCTGAGGCTTTGAAAGAAGAAAATGCTTCTCTGCGGTCAGAAGTTAGTCGGATCAGAAGTGAGTATGAGCAGCTAGCCTCTGAGAATGCAGCTCTCAAGGAGAGACTTGGCGAACTACCTGGGAATGATGATCTTAGGTCCAGAACAATGAATGATCAGCCTGCGGCTGATGACCCTCAACAGAGCGGGCAGGCAGAGGCCGTGGAGGGTGGCAATTAG 1185 0.47 MGSSEMDKTPKEKESKTPPPASQEQSSATSTGAVNPEWSSFQAYSPIPPHGFMASSPQAAPYMWGVQHIMPPYGTPTHPYVAMYPHGGIYAHPSMPPGSYPFSPFPMPSPNGIAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEPGKTGTSANGIHSKSGESASEGSSEGSDANSQNESQLKSGGRQDSYEDEPSQNGSSAHAPQNGGINTPHAVVNQTMSVIPITAAGVPGAVPGPTTNLNIGMDYXXXXXXXXGMVAAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEQLASENAALKERLGELPGNDDLRSRTMNDQPAADDPQQSGQAEAVEGGN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00147 394 MobiDBLite consensus disorder prediction 19 42 - -
Adu05g00147 394 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Adu05g00147 394 MobiDBLite consensus disorder prediction 1 52 - -
Adu05g00147 394 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 291 354 IPR004827 GO:0003700|GO:0006355
Adu05g00147 394 SUPERFAMILY Leucine zipper domain 292 348 IPR046347 GO:0003700|GO:0006355
Adu05g00147 394 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 392 - -
Adu05g00147 394 Pfam bZIP transcription factor 289 351 IPR004827 GO:0003700|GO:0006355
Adu05g00147 394 Pfam Disordered region downstream of MFMR 135 262 - -
Adu05g00147 394 MobiDBLite consensus disorder prediction 1 18 - -
Adu05g00147 394 SMART brlzneu 289 353 IPR004827 GO:0003700|GO:0006355
Adu05g00147 394 MobiDBLite consensus disorder prediction 351 394 - -
Adu05g00147 394 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 296 311 IPR004827 GO:0003700|GO:0006355
Adu05g00147 394 Gene3D - 292 346 - -
Adu05g00147 394 CDD bZIP_plant_GBF1 294 344 IPR045314 GO:0003700|GO:0006355
Adu05g00147 394 MobiDBLite consensus disorder prediction 108 229 - -
Adu05g00147 394 MobiDBLite consensus disorder prediction 146 229 - -
Adu05g00147 394 Coils Coil 309 357 - -
Adu05g00147 394 MobiDBLite consensus disorder prediction 368 382 - -
Adu05g00147 394 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 392 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00147 Adu-Chr5 1652893 1702276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00147 1 388 bZIP Transcription Factor Family AT2G35530 61.369 1.08e-158 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu05g00147 MFMR_assoc 2.6e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00147 K09060 - gmx:778122 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00147 05 1652893 1702276 Adu05g00147 05 1652893 1702276 ECH
Adu05g00147 05 1652893 1702276 Adu01g00954 01 13133940 13137348 PCT