Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00132 ATGGAAGCTTTGTTCAAGGAATGTCAACACCCGGATGATAAGCAACGGCTGAAACTTAGCCATGAACTCGGCCTTAAACCGCGCCAGGTTAAGTTCTGGTTCCAGAACCGCCGAACCCAGATGAAGGCACAACAAGATCGGGCTGAAAATGTGATTCTAAGAGCGGAGAATGAGACTCTAAAGAATGAGAATTATCGTCTACAAGCATCACTGCGTAGTGTTATATGTCCCAATTGTGGTGGTCCAGGAATAATGGGAGCTGATCTTGGCTTGGATGAACAACAACTTCGCATTGAAAATGCCAGGTTAAGAGAGGAGTTGGAACGTGTGTGTTGCCTGACATCAAGATACAGCGGGCGTCCAATCCAAACAATGGCACCAGCACCAGCACTGATGGCCCCATCACTGGACTTGGACATGAACATCTACCCAAGGCACTACGTTGATCCCACCATTCCCCCGTGCAACGAGATGATTCCTGTTCCAATGCTTCCCCCGGAGGCTTCTCAGTTCCCGGAGGGCGGTCTCTTAATGGAAGAGGAGAAGTCTCTGGCCATGGACCTTGCCGCCTCTTCCATGGCTGAGCTTGTCAAGATGTGCCATGCTAACGAGCCGCTTTGGATCCGTGGCTGCGACGGCGATAGGGAAGTTCTTAACTTTGAGGAGCACGGCAGGCTGTTCCCGTGGCCGTTGAATCTCAAGCACCGGACTGACCTCCGGACTGAAGCTAGCCGTGACACCGCTGTTGTCATCATGAATAGTGTCACTCTTGTTGATGCCTTCCTCGATGCTAACAAGTGGATGGAACTGTTTCCCACAATTGTTTCTAGAGCAAAAACGGTGCAAATAATATCTTCAAATGCTTCTGGCCATGCAAGCGGGTCTCTTCAGCTGATGTATGCGGAATTCCAAGTTCTTTCTCCATTGGTATCGACTCGTGAGACTCATTTCCTTCGGTACTGTCAACATAACGCTGAGGAGGGAACGTGGGGCATTGTTGACTTCCCAATCGATAGCTTTCAGCAGAACCTGCACCCTTCTTATCCCAGATACTGCAGGCGACCCTCTGGCTGTCTCATTCAAGATATGCCAAATGGATATTCAAGGGTAACATGGATTGAGCATGCAGAAGTAGAAGAGAAACCCGTGCATCAGATATTCAGCAATTATGTTTACAGTGGTATGGCTTTTGGTGCACAGCGGTGGTTGGGTGTTTTGCAGAGACAATGTGAAAGGGTTGCAAGCCTCATGGCCAGAAACATTTCAGATCTTGGAGTGATACACTCACCAGAAGCTAGAAAGAACTTGATGAAACTTGCACAGAGGATGATAAGAACGTTCAGCCTCAACATGAGCACGTCAAGTGGTCAATCATGGACTGCAATATCAGATTCCCCTGAAGATACCGTTAGAATCACCACCAGGAAGATCACAGAGCCTGGTCAACCCAACGGTGTCATTCTGGGTGCTGTTTCAACCACTTGGCTTCCCTATTCCCACACCAAGGTCTTCGATCTGTTACGCGATGAACGCCACAGATCTCAGATGGATGCTCTTTCCAATGGGAATTCACTCAATGAAGTTGCTCACATTGCAAATGGTTCCCATCCAGGAAACTGCATTTCCCTTCTCCGCATCAATGTTGCGAGCAACTCATCGCAGAACGTGGAGCTAATGCTGCAAGAAAGCTGTACGGACCAATCAGGGAGTGTGGTGGTGTACACTACCATTGCTGTGGACTCCATTCAGGTAGCCATGAGCGGAGAGGATCCTTCATGCATTGCGCTTCTCCCACAAGGCTTCATTATAACGCCAATGCCGCCATCAAGCAACAACTCGTCCTCTTCTGAAGCTCTTATCAATGACCATGGCTGCCTCCTCACCGTTGGCCTCCAGATTCTAGCTAGCACCATTCCCTCCGCCAAGCTCAACCTGTCCAGCGTCACCTCCATCACCAACCACCTCTGCAGCACCGTGCACCAGATCGAAGCCTCTCTTTGCAACACCGCCAACAATGAGCCAACCACCACCACTGCACCTCCCAAAACAGTGAACTAA 2058 0.4961 MEALFKECQHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRAENVILRAENETLKNENYRLQASLRSVICPNCGGPGIMGADLGLDEQQLRIENARLREELERVCCLTSRYSGRPIQTMAPAPALMAPSLDLDMNIYPRHYVDPTIPPCNEMIPVPMLPPEASQFPEGGLLMEEEKSLAMDLAASSMAELVKMCHANEPLWIRGCDGDREVLNFEEHGRLFPWPLNLKHRTDLRTEASRDTAVVIMNSVTLVDAFLDANKWMELFPTIVSRAKTVQIISSNASGHASGSLQLMYAEFQVLSPLVSTRETHFLRYCQHNAEEGTWGIVDFPIDSFQQNLHPSYPRYCRRPSGCLIQDMPNGYSRVTWIEHAEVEEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIHSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTAISDSPEDTVRITTRKITEPGQPNGVILGAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSVVVYTTIAVDSIQVAMSGEDPSCIALLPQGFIITPMPPSSNNSSSSEALINDHGCLLTVGLQILASTIPSAKLNLSSVTSITNHLCSTVHQIEASLCNTANNEPTTTTAPPKTVN 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00132 685 ProSitePatterns 'Homeobox' domain signature. 19 42 IPR017970 GO:0000981|GO:0006355
Adu05g00132 685 SUPERFAMILY Homeodomain-like 1 45 IPR009057 -
Adu05g00132 685 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 672 IPR042160 -
Adu05g00132 685 Pfam START domain 188 412 IPR002913 GO:0008289
Adu05g00132 685 ProSiteProfiles START domain profile. 178 415 IPR002913 GO:0008289
Adu05g00132 685 CDD homeodomain 1 45 IPR001356 GO:0003677
Adu05g00132 685 SMART START_1 187 412 IPR002913 GO:0008289
Adu05g00132 685 SUPERFAMILY Bet v1-like 430 663 - -
Adu05g00132 685 ProSiteProfiles 'Homeobox' domain profile. 1 44 IPR001356 GO:0003677
Adu05g00132 685 Coils Coil 38 63 - -
Adu05g00132 685 PANTHER - 1 672 - -
Adu05g00132 685 SUPERFAMILY Bet v1-like 179 414 - -
Adu05g00132 685 Pfam Homeodomain 1 42 IPR001356 GO:0003677
Adu05g00132 685 Gene3D - 240 401 IPR023393 -
Adu05g00132 685 SMART HOX_1 1 48 IPR001356 GO:0003677
Adu05g00132 685 CDD START_ArGLABRA2_like 182 411 - -
Adu05g00132 685 Gene3D - 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00132 Adu-Chr5 1417144 1422420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00132 1 669 Homeobox Transcription Factor Family AT5G46880 61.000 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu05g00132 START 3.2e-39 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00132 - - gmx:100812829 1152.12