Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00126 ATGAGTTTTCAAGACATCGAGGCCGGCCGGCCGTTCGCTTCCCGCCGAGGCAACATCAACGGCAAGCAAGACCCCACTCAGGCGGTGGCTGCCGGAATTTTCCAGATCAACACTGCGGTCTCCACCTTCCAGAGGCTCGTTAACACCCTAGGAACCCCCAAAGACACCCCCGAGCTCCGCGAGAAGCTGCACAAGACAAGGCTGCACATTGGACAATTGGTGAAGGACACTTCAGCGAAGCTTAAACAAGCTAGTGAAATTGATCACCAATCTAATATCAATGCAAGCAAGAAGATAGCAGATGCTAAACTCGCGAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAGGCACAGCGTCTTGCGGCAGAGAGGGAAACAGCTTACACCCCATTTGTTCCACAAGCAGCTCCATCCAGCTATACAGCTAATGAAGCAGTTGCTAATTCTGGTAAGATGCCAGAACAGCGTGCCCTTCTTGTGGAATCCAGAAGGCAGGAGGTGGTGTTTTTAGATAATGAGATTGCCTTCAATGAGGCTATCATTGAAGAAAGAGATCAAGGCATTCAAGAAATTCAGCAGCAAATTGGTGAAGTAAATGAAATTTTTAAAGACCTTGCTGTGCTTGTGCATGAACAAGGAGCTATGATTGATGATATTGGGTCCAACATTGAGCATTCCCATGCAGCAACTGCACAAGCAAGATCTCAACTTGCTAAAGCTTCAAAGACTCAAAGATCAAATTCATCTTTGTTATGTCATTATACATGGGCTTTGGTTGCATGTGCAGCTAGCATCTTCCATGCTGATGATCTCTCTCAGGTGATAGAAGGGAATCTGTTGATGCTTTTGAATATTGAGATTGAGTAA 870 0.4563 MSFQDIEAGRPFASRRGNINGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQASEIDHQSNINASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAAPSSYTANEAVANSGKMPEQRALLVESRRQEVVFLDNEIAFNEAIIEERDQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIEHSHAATAQARSQLAKASKTQRSNSSLLCHYTWALVACAASIFHADDLSQVIEGNLLMLLNIEIE 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00126 289 PANTHER SYNTAXIN 2 255 IPR045242 -
Adu05g00126 289 ProSitePatterns Syntaxin / epimorphin family signature. 185 224 IPR006012 GO:0005484|GO:0006886|GO:0016020
Adu05g00126 289 Gene3D - 173 269 - -
Adu05g00126 289 SMART SynN_4 14 127 IPR006011 GO:0016020
Adu05g00126 289 MobiDBLite consensus disorder prediction 1 23 - -
Adu05g00126 289 SMART tSNARE_6 174 241 IPR000727 -
Adu05g00126 289 CDD SynN 23 145 IPR006011 GO:0016020
Adu05g00126 289 SUPERFAMILY t-snare proteins 23 234 IPR010989 GO:0016020|GO:0016192
Adu05g00126 289 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 179 241 IPR000727 -
Adu05g00126 289 Gene3D - 17 133 - -
Adu05g00126 289 PANTHER SYNTAXIN OF PLANTS PROTEIN 2 255 - -
Adu05g00126 289 Pfam SNARE domain 216 253 IPR000727 -
Adu05g00126 289 Pfam Syntaxin-like protein 30 129 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00126 Adu-Chr5 1363992 1367649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00126 1 253 SNARE and Associated Proteins AT5G46860 77.559 5.06e-141 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00126 - K08488 gmx:547656 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00126 05 1363992 1367649 Adu05g00126 05 1363992 1367649 ECH