Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00122 ATGCTCGTGCCGGCGCCGGCACCGATGCCGATGCCGATGCCGAGCACGAACACGCCGCCGCCGTTCCTGAGCAAGACGTACGACATGGTAGAGGACCCTTCAACGGACCCGATCGTGTCGTGGAGCGCAACGAACAATAGCTTCGTGGTTTGGAACCCACCGGAATTCGCAAGGGACCTTTTGCCGAAATACTTCAAGCACAACAACTTCTCCAGCTTCGTTAGGCAGTTGAACACTTACGGTTTCAGGAAGGTTGATCCAGATCGCTGGGAATTTGCAAATGAAGGATTTTTGAGGGGTCAAAAGCACTTACTTAGAACTATAACTCGGCGGAAACCTGCCCATGGTCATAGTCATCAACAGGCTCCACAATCACATGGACAGAGTTCAACAGCAGGGGCATGTGTAGAAGTTGGGAAGTTTGGGATTGAGGAAGAGGTTGAGAGACTTAAAAGAGATAAGAACGTCCTCATGCAAGAGCTTGTGAGGTTGCGACAGCAGCAACAGGCCACCGATAGCAAGATGCAGACAATGGCTCAGCGCCTTCATGGAATGGAGCAACGACAACAACAAATGATGTCATTTCTGGCAAAAGCTGTTCAAAGCCCAGGATTCTTTGCTCAGTTTGTGCAACACCAAAGTGAGAACAATAGACGCATAACTGAAGTCAATAAAAAGCGTCGGCTCAGGCCGGAAGGCATTTCCGAAACTGAGCCTGCTACTGTTCCTGCTGGACAAATTGTGAAATATCAGCCTATGATGAATGACCTAGCAAAATCAATGCTAAAGCAAATTATCAAATGGGATGCTTCTCATGCCGATGCTCTAAGTAAAAACTCAGATAATTACTTGATTGCCGATGACACCATGACTTCAACCTGGCCTTCTGGTTCTGGGGTAACACTTCAAGAGGTTCCTCCGGCTTCATTGCAGTCCTCCCACACTCCTGCTGCTACAGGGACTCAAGGACACATCCCATCAGCAGCCATACCTGATATTCCATCTTTACCACAAGTTGCAGCTCCTGAAAAAGTTACAAAGGATGGATCATCTGGGGCACCTTCTATCCATGCTTCTCAAGCAGATGTTATCATGCCTGATCTTCCTTCGATAAATGAGACAGAGACAAGAAGTAATATTCAAATGCCAGAGAAAGGGGACGAGGGATATATGGATCCTAATTCACTAGGAGTTGGTGCGTCATTTCCTATTGATATAGAAGGTTTTTCCCCTGAAATAGACATCGACGATTTCTTATCGAATCCTTCTATCTGGGATGATCTCTTGCAAACTCCAGTGCCCGTGGATATTGAGGAAGATGTTGCCAAAGAGTCCAAGGGTAATGGGGTGGAAACAACAGAAAATGGATGGGACAAAACTCAACGCATGGATCACCTTACTGAGCAGATGGGTCTTCTTTCTTCGGATGTACAAAAGAGAGTTTGA 1446 0.4689 MLVPAPAPMPMPMPSTNTPPPFLSKTYDMVEDPSTDPIVSWSATNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLRTITRRKPAHGHSHQQAPQSHGQSSTAGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATDSKMQTMAQRLHGMEQRQQQMMSFLAKAVQSPGFFAQFVQHQSENNRRITEVNKKRRLRPEGISETEPATVPAGQIVKYQPMMNDLAKSMLKQIIKWDASHADALSKNSDNYLIADDTMTSTWPSGSGVTLQEVPPASLQSSHTPAATGTQGHIPSAAIPDIPSLPQVAAPEKVTKDGSSGAPSIHASQADVIMPDLPSINETETRSNIQMPEKGDEGYMDPNSLGVGASFPIDIEGFSPEIDIDDFLSNPSIWDDLLQTPVPVDIEEDVAKESKGNGVETTENGWDKTQRMDHLTEQMGLLSSDVQKRV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00122 481 Pfam HSF-type DNA-binding 22 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g00122 481 MobiDBLite consensus disorder prediction 111 131 - -
Adu05g00122 481 MobiDBLite consensus disorder prediction 298 322 - -
Adu05g00122 481 MobiDBLite consensus disorder prediction 443 462 - -
Adu05g00122 481 MobiDBLite consensus disorder prediction 369 389 - -
Adu05g00122 481 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 10 466 - -
Adu05g00122 481 ProSitePatterns HSF-type DNA-binding domain signature. 61 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g00122 481 PRINTS Heat shock factor (HSF) domain signature 60 72 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g00122 481 PRINTS Heat shock factor (HSF) domain signature 22 45 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g00122 481 PRINTS Heat shock factor (HSF) domain signature 73 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g00122 481 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 466 IPR027725 -
Adu05g00122 481 Gene3D - 15 112 IPR036388 -
Adu05g00122 481 SMART hsfneu3 18 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu05g00122 481 SUPERFAMILY "Winged helix" DNA-binding domain 18 111 IPR036390 -
Adu05g00122 481 Coils Coil 140 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00122 Adu-Chr5 1343309 1346393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00122 4 474 HSF AT1G32330 51.102 1.74e-155 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu05g00122 HSF_DNA-bind 5e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00122 K09419 - gmx:100815121 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00122 05 1343309 1346393 Adu05g00122 05 1343309 1346393 ECH