Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00102 ATGGGCCTCGACGCTTCCCTCCTCCACGAATTCCCCACCTTCCCTTATTCCTCCGTCAAGGATCTCCGTAAGGAGAAGAAGTACGCCCTTGAATGCGCCATCTGTCTCTTGGAGTTCGAGGACGACACCGTTCTCCGCTTGCTCCCCGTTTGCCGCCACGTGTTCCACCAAGAGTGCGTTGATCTCTGGCTTCAACGACACAAGACCTGCCCCGTTTGCCGCACTGATCTTGAAACCAGAAAGTCTTCTGCTTCTTCGATTACTCACGATCATGACAGGCAGAGTGCTGCTGTTGGAGGAGACGACGGTAATGGTGATGATGACGTCTGCATTGACGTCAAAGAAGGCGGCGACGACGACGACGGTAATAACAGATTCTTGCGGTCGCATTCGACGGGGCATTCAATAGTTATGGTTAGAGAAGAAGGAAGAAACGACGAAGATGATGATAGGTATAGGTTGAGGTTGCAGGAGGATGCAGAGTTGAGAATTGTTAACAATGATATGAAGAAGAAGAAGAATCACCAATACTCGAGAAGCTGCGAGAGTTACAAGGAGATGATGATGATGATGGCGGCGGCAAAGCCCCTTGTTCCGCCTTGTACTAACTGTGGTTATGTTGATCATCACACTCTCTCTGTTCCTTCTTCTTCTTCGCGTGTTGGTGCAAATTGA 675 0.4978 MGLDASLLHEFPTFPYSSVKDLRKEKKYALECAICLLEFEDDTVLRLLPVCRHVFHQECVDLWLQRHKTCPVCRTDLETRKSSASSITHDHDRQSAAVGGDDGNGDDDVCIDVKEGGDDDDGNNRFLRSHSTGHSIVMVREEGRNDEDDDRYRLRLQEDAELRIVNNDMKKKKNHQYSRSCESYKEMMMMMAAAKPLVPPCTNCGYVDHHTLSVPSSSSRVGAN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00102 224 MobiDBLite consensus disorder prediction 81 105 - -
Adu05g00102 224 CDD RING-H2_PA-TM-RING 31 74 - -
Adu05g00102 224 Pfam Ring finger domain 31 74 IPR001841 -
Adu05g00102 224 ProSiteProfiles Zinc finger RING-type profile. 32 74 IPR001841 -
Adu05g00102 224 PANTHER RING FINGER DOMAIN-CONTAINING 2 176 - -
Adu05g00102 224 SUPERFAMILY RING/U-box 20 80 - -
Adu05g00102 224 SMART ring_2 32 73 IPR001841 -
Adu05g00102 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 80 IPR013083 -
Adu05g00102 224 PANTHER RING-H2 FINGER PROTEIN ATL29 2 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00102 Adu-Chr5 1106153 1106827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00102 2 174 Rapid Response to Elicitors AT3G05200 40.314 1.94e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00102 - - adu:107487019 447.588