Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00101 ATGGCCTTATTAGAAGATCATCATCATCTTTCATCATCAAATGAGTTTTCCAACTTCGTTGTGTATGATACTATTTCTGCAACCCCTTTTAGCAGCCATGGAAGTTCATCTACTTCTTTCTTGGTAGAAGAAAACAAGGTGGAAGAGTATGGAGAGAGGACAACAACACGAAAACGGCAATCGGGTGAAGCAGGGCAAGGGAAGAAGAAGAGAAGGAGAAAGCCAAGGGTATGCAAGAACAAAGAAGAAGCTGAGAATCAAAGAATGATCCACATTACTGTTGAAAGGAACAGAAGGAAGCTCATGAATGAGCATCTTGCTGTTCTTCGCTCACTCATGCCTGAATCCTATGTCCAAAGGGGTGATCAAGCATCAATAGTAGGTGGAGCTATAGAGTTTGTGAAGGAGCTAGAGCAGCTGTTGCAGTGTCTTGAGGCTCAAAAGTTGAAGCTTGTACATCAAGGAATGGCAGCACAACAATCCAACAAGAATAACAATGAAGATGAGTTGATGATGATGATGATGATGGTGATGGGATCAGCCCCTTTTTCTCATTTCTTTGTGCATCCACAGTTCACTTGGTCTCAGGCTCCAAACAAATATGCTTCCCACCACAACAAGACTAACAATAATAATAATAATAATCAAGCAGCCATGGCTGACATTGAGGTTACTTTGATTGAAACCCATGCAAACCTCAGAATCCTCTCAAGGAAAAGCCCCAAGCAACTTTCAAAGTTGCTTTCTGGTTTTCAGAATCTCTCTCTCACCATTTTGCATCTCAATGTCACCTCCATGGACCCCTTAGTACTCTATTCCATTAGCGCCAAGGTTGAAGAAGAATGCCAACTTGGTTCTGTAGATGACATTGCAAGTGCAGTTCACAACTTGCTTAAAATGATTGAAGAAGAAGATTCCCTTTGCAGTTTATACGTGCTGAATGGATGTATTGTCCTACATTGCCTTAACACTAATAAGTACTTCACTTAG 990 0.4121 MALLEDHHHLSSSNEFSNFVVYDTISATPFSSHGSSSTSFLVEENKVEEYGERTTTRKRQSGEAGQGKKKRRRKPRVCKNKEEAENQRMIHITVERNRRKLMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEQLLQCLEAQKLKLVHQGMAAQQSNKNNNEDELMMMMMMVMGSAPFSHFFVHPQFTWSQAPNKYASHHNKTNNNNNNNQAAMADIEVTLIETHANLRILSRKSPKQLSKLLSGFQNLSLTILHLNVTSMDPLVLYSISAKVEEECQLGSVDDIASAVHNLLKMIEEEDSLCSLYVLNGCIVLHCLNTNKYFT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00101 329 Gene3D - 78 154 IPR036638 GO:0046983
Adu05g00101 329 PANTHER MAX DIMERIZATION, MAD 15 308 - -
Adu05g00101 329 PANTHER TRANSCRIPTION FACTOR BHLH71 15 308 - -
Adu05g00101 329 MobiDBLite consensus disorder prediction 49 84 - -
Adu05g00101 329 Coils Coil 134 154 - -
Adu05g00101 329 MobiDBLite consensus disorder prediction 49 63 - -
Adu05g00101 329 CDD bHLH_AtFAMA_like 89 148 - -
Adu05g00101 329 SMART finulus 92 143 IPR011598 GO:0046983
Adu05g00101 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 156 IPR036638 GO:0046983
Adu05g00101 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 86 137 IPR011598 GO:0046983
Adu05g00101 329 Pfam Helix-loop-helix DNA-binding domain 87 138 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00101 Adu-Chr5 1099771 1101263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00101 78 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.244 2.71e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu05g00101 HLH 3.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00101 - - aip:107642328 525.783