Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00086 ATGAACCTCTGGACAGACGACAACTCCTCCGTTATGGAGGCCTTCATGACCTCCTCCGACCTCTCTTCCCTCTGGCCTCCGCCACCTCCTCCCCCTCAATCCGCCTCCTCTGCCGCCGTATTTAATCAGGATACCCTCCAGCAGCGCCTCCAGGCTCTCATCGAAGGGGCTAGGGAGAGCTGGACATATGCTATTTTCTGGCAGTCTTCCTATGACTACCCCTCCTCCGCCTCCACCGCCGTCCTCGGCTGGGGCGACGGCTATTACAAGGGCGATGAAGACAAGGGAAAGGCCAAATCCACCAAAACCACCACCCCCGCCGAGCAGGATCACCGTAAAAAGGTCCTCCGCGAGCTCAATTCCCTGATTTCCGGCTCCGCTGCCGCCCCCTCCGACGATGTCGAAGAGGAAGTCACCGACACCGAGTGGTTCTTCCTAGTCTCCATGACGCAGTCCTTTGTAAGCGGGACGGGGCTCCCCGGCCAAGCTTTCTACCACTCGAGCCCGGTCTGGCTCACAGGCCCGGACAGACTCGCCGGTTCGTCGTGCGAGCGGGCCAGACAAGGCCAGGTATTCGGGCTCCAAACCCTGGTTTGCATACCTTCCTCAAACGGGGTGGTTGAGCTTGGCTCCACGGAGATGATCTTCCAAAATCCCGATCTGATGAACAAGGTTAGGATTCTCTTCAATTTCAATAGCAACAGCATCGACGTGGGCTCATCGTGGCCGTTAACCGGCAGCACAACTACCACAGCCGCCGATCAAGGTGAGAACGATCCTTCTTCATTATGGCTTAACGACTCTGAAATTAGGGATTCTGTTACCACCGTTACTACCGTCACAACGACCACTCCTGCCTCGGTTATTTCCGTTAACCCTGGTTCGAGCGCCTTGGCAGAAACCCCAAGCTCCGTTCACTTGCCGAATAATAACAACAACACGCACGCTGGTGGCGCGTCTCAATCGCAGAACCGGAGCTTCTTCTCAAGGGAGTTGAACTTTTCGGAGTTTGGATTTGACGGTAGTAACGCCGTCAAAACGGGGAACGGTCAGCATCACTCGCTCAAGCCGGAATCTGGTGAGATTCTGAGCTTCGGCGAGAGCAAGAGGAGCTCGTATGGCGGAGGTGGAGGCGGAGGCGGAGGAGGTGGAAACGCGAACTTCTTCTCCGGCCAGTCGCAGTTCGTTGCCGCAGCCGAGGACAACAACGGGAAAAAGAGGAAGTCACCGAATTCGAGAGGAAGCAACAACGACGACGGCATGCTCTCTTTCACATCCGGTGTGATTCTTCCGCCGTCGAACATGAAATCCAGTGGCGGAGGCGGTGATTCCGACCACTCAGACCTGGAGGCCTCGGTGGTGAAGGAGAACGAAAGCAGCAGAGTGGTGGAGCCGGAGAAGCGGCCAAGAAAAAGAGGGCGGAAGCCGGCGAATGGCAGAGAGGAACCGTTGAACCACGTGGAAGCGGAGAGGCAGAGAAGGGAGAAGCTCAACCAGCGATTCTACGCCCTCCGTGCCGTAGTTCCAAACGTTTCAAAGATGGACAAAGCTTCACTCCTTGGCGACGCCATTTCCTACATCACAGAGCTCAAATCAAAGCTTCAAACCCTCGAATCAGACAAAGATGGCTTAGAGAAGCAGCTTGATTCACTGAAGAAGGATCTTGATAATGTCAAAAAGGAAGCTTCTTCAGCTCCTCCTCCTCTTCCAGACAAGGAACTAAGGATGTCCTCCAACAACCTTGTAGGTGGTGGGAAGCTTATTGATTTGGATATAGACGTGAAGATAATTGGCTGGGATGCAATGATAAGAATCCAATGCAGCAAGAAGAACCACCCTGCCGCGAGATTGATGGCAGCCCTGATGGAGCTGGACTTGGACGTCCACCACGCCAGCGTGTCTGTGGTGAATGATTTGATGATACAACAGGCAACAGTGAAGATGGGTAGCCGGTTTTACACGCAGGAGCAGCTCCGGTCGGCGCTAACATCCAAAGTTGGTGGTGATGTACGGTAG 2016 0.5486 MNLWTDDNSSVMEAFMTSSDLSSLWPPPPPPPQSASSAAVFNQDTLQQRLQALIEGARESWTYAIFWQSSYDYPSSASTAVLGWGDGYYKGDEDKGKAKSTKTTTPAEQDHRKKVLRELNSLISGSAAAPSDDVEEEVTDTEWFFLVSMTQSFVSGTGLPGQAFYHSSPVWLTGPDRLAGSSCERARQGQVFGLQTLVCIPSSNGVVELGSTEMIFQNPDLMNKVRILFNFNSNSIDVGSSWPLTGSTTTTAADQGENDPSSLWLNDSEIRDSVTTVTTVTTTTPASVISVNPGSSALAETPSSVHLPNNNNNTHAGGASQSQNRSFFSRELNFSEFGFDGSNAVKTGNGQHHSLKPESGEILSFGESKRSSYGGGGGGGGGGGNANFFSGQSQFVAAAEDNNGKKRKSPNSRGSNNDDGMLSFTSGVILPPSNMKSSGGGGDSDHSDLEASVVKENESSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQTLESDKDGLEKQLDSLKKDLDNVKKEASSAPPPLPDKELRMSSNNLVGGGKLIDLDIDVKIIGWDAMIRIQCSKKNHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRSALTSKVGGDVR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00086 671 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 481 530 IPR011598 GO:0046983
Adu05g00086 671 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 46 229 IPR025610 -
Adu05g00086 671 MobiDBLite consensus disorder prediction 287 324 - -
Adu05g00086 671 CDD bHLH_AtAIB_like 478 553 - -
Adu05g00086 671 SMART finulus 487 536 IPR011598 GO:0046983
Adu05g00086 671 Coils Coil 527 561 - -
Adu05g00086 671 MobiDBLite consensus disorder prediction 366 491 - -
Adu05g00086 671 MobiDBLite consensus disorder prediction 414 441 - -
Adu05g00086 671 MobiDBLite consensus disorder prediction 448 491 - -
Adu05g00086 671 PANTHER TRANSCRIPTION FACTOR MYC2 34 667 - -
Adu05g00086 671 Gene3D - 473 563 IPR036638 GO:0046983
Adu05g00086 671 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 484 551 IPR036638 GO:0046983
Adu05g00086 671 Pfam Helix-loop-helix DNA-binding domain 485 530 IPR011598 GO:0046983
Adu05g00086 671 PANTHER MYC 34 667 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00086 Adu-Chr5 938494 941250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00086 1 667 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 53.201 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu05g00086 bHLH-MYC_N 1.9e-54 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00086 K13422 - gmx:100776289 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00086 05 938494 941250 Adu05g00086 05 938494 941250 ECH