Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00079 ATGGCATGTGTAGCGTCAGCAACCACCTCCTCCTCCTACTTTCCTTTCacctatgatgcttttctcagcttcagaggtgaggatacccgttctggcttcactggctatctctattactctctcacaaataggggaatcaagactttcattgatgatgaggagcttgggagagggaaggagatcgcatcctcacttttcactgcaatccaacagtccagggccgcaatcgttgtgctctctaagtattatgcttcttcttcattttgtttggatgaacttgtcaagattcttgactgtgttaagggaaagggcaggttgattattcctgttttctatgacgtggatccttctgatgtgcggaagcagacagggacttatggagaagcattggctgtgcatgagaacaagttcaagttcgagaggcttaagagatggaaaattgctttggagaaaatagcagacttgtctggttatcatttcaaaCACGGGGATGGATATGAGCACAAGTTTGTTGCCAAGATTGTTGGACATGTATCAATAGAGATTAAACGTGCTACTTTACCTATTGTAGATCACCCAGTTGGATTGGATTCCCAAGTGGAAAATGTAATTTCTCTTTTGAATGTTGGGTCTAGTGATGGAGTTTGCGTGCTCGGGATTCATGGAATTGGTGGAATAGGTAAAACAACACTTGCTGTGGCAGTGTATAATTGGCTTGTCAATCATTTTGCAGTTTTATGTTTTGAAAATATATGTTTCCATGAAAATACAAGAGAGAATTCAAATAAATATGGATTAAAACATCTGCAGAAGACCCTTCTGTTTGAACTAGTTGGAGAAAATAAAGTTACATTGATGAGTGTTAGAGAAGGAATATCAATGTTAAAGCAAAAACTCCAACGAAagaaaattattttgattctagatgacattgaccaacaagagcaattagatgctctagctggaaatcttgattggtttagtcctggtagtagagttatcatcacaactcgggacacgagtttgctatcaaggtatgaggacagaataacatatgagttagataagttgaatgataaagattctctagaattgatcagtttcaaagctttaaaaactaacaaagttgatcgaagttacttagacatcttgagcagtgtggtaacttatgcttctggcctaccattggctttggaagttatgggatccaactttctgggcaaaagtatagaacagtggaagtctgcattagatcaatatagaaaaattcccaataaaaagatacaaaatgtgcttaaggtaagctttgatggattggaggaatttgagaaggaaatttttcttgatattgcttgttgtttcaaagaatgtgaattgacagatgtcaaaaggatactttgtgctcatcataatgtcgactccttggaatatggacttaaagtgttggttgaaaaatcactaataaaaatggatgcatatcgtggaataatcttgcatgccctcattcaagacatgggtagagaaattgtgcgtcaagaatcaccaaaaaagcctgggaagcgtagtcgattatggCTCCTTGAAGATATAGTTCAAGTTTTTGAAATGAATATGGGATCTGACAAAATTGAAATGATACATATGGATTTTCCCAAGTTTGAAAAAGTAATAAGATGGGATGGAGAGGCTTTCAAGAAAATGAGAAATCTCAAAACACTGTTTATTAGACATACTTATTTTTCCCAAGGTCCCAAGTATCTTCCAAATTGTTTAAGAGTGTTGAATTGGGAGGAATATCCTTCACCTTGTTTACCACTTGATTTTCATCCGGAGGGACTTGTCATATTCCAATTATCCGGCAAGAGTATACAGTCAGTTAGGTTTCTTGAAAAGCAAAAGTACATGAGCTTGACGGTCATAAATCTTGATCATTCTAATGTAGAAGAGATACCTGATATATCCGGGGTCCCAAATTTAGTAAACCTATCATTGAATATGTGCTTGAAGTTAATTAAAATTCACGAATCAATTGTATTCTTAGATAGACTTGGCGTATTGAGTGCTCAAGGTTGCAGGAGGCTTAAGAGATTTCCATCTATCAAGTTGACCAATCTTGTACATCTCTGTCTTTCAGGGTGCTCTAGTCTTGAACATTTTCCAAAAATGTTAGGAAAATTAAAGAATATACTAACAATTTATTCGGATGGTACTCTGATAAAAGAATTGCCATCTGCTATTAAAAGGTTTTGTTTGATTAGCCATTCAAGTATGATAAAACATGGAGCAAGTTCCCCACCAGCACTAAGTTCCCCAATTGTCATGTCTCCAGATGAAGAGAAAGTGACTTCTGAGAGGTCTGAAGTAGATGTTGAAGAAGAACAAGGGAGTCCAATGGCACCTTTGGAGGCAAAACATTCTGCCTGCAAACTACCAGATTTGCTCCATGAATCTTTTACAACTTATCTTACCTGGTTTCGCAATGTGGAAGATTTAGACCTGTCAGAGCATAATTTCACAGTTCTTGATGAAAGCCTCAAAGAACTTTGCTCCTTGAGGTCACTTAGTTTGAATGGCTGCAGAGAACTTCGAGAAATTAAAGGGATTCCACCAAACATAAAGTATTTCTCTGCAAGAAACTGCATATCCTTGACTTACGCCAGCAAAAACATGTTACTTAACAAGGAATTGCATGAGGATGGAGCCAAGGATTTTGTTCTTCCAAGTAGTAGCATCCCAAATTGGGTGGAGCATAGTAGCAACAATGATTCAATTTCTTTCTGGTTTCGCAACAAGCTTCCTGAAATCTCTTTATGTGTTCTTGTTGGACCTGCGGTTGATTTTTCGTGTACACACATTTGTCCGGAGTTTATCATCAACAGCAGCAGAGGTCAAGCGGAACATCTTGAATCAGTGGAGACATCCAATCAATTAGTGGATCATATATTTATTACTGATCCAAAATTGATGAAATCCAAAGTGAATGAAGTGATTTTAGAAAATGAATGGAATCATGTTGTGTGTAAAATTAAGTCTTGTGGCCAAAGGGGAATAGCTATCAAGAAACTTGGAATCTATTTTCACAAAGATAGAAGTAGCATGGAGAATATTCAATTTATTGATCCTCTGTTGCATAAAGAAGAGTTGATCATGGGAAATTTTCAGGTAAATATGCAACAACAGAAGTATATGGCATCACATGAAAGGAGGCTTTCATTGGATCTTCCTTTAGGAATGAGTTTTTCATTGAATGATCATGTGAGTAGGGAACCAAATTCCAGTGTGCAAGGTAATTTACATTGA 3300 0.2455 MACVASATTSSSYFPFTYDAFLSFRGEDTRSGFTGYLYYSLTNRGIKTFIDDEELGRGKEIASSLFTAIQQSRAAIVVLSKYYASSSFCLDELVKILDCVKGKGRLIIPVFYDVDPSDVRKQTGTYGEALAVHENKFKFERLKRWKIALEKIADLSGYHFKHGDGYEHKFVAKIVGHVSIEIKRATLPIVDHPVGLDSQVENVISLLNVGSSDGVCVLGIHGIGGIGKTTLAVAVYNWLVNHFAVLCFENICFHENTRENSNKYGLKHLQKTLLFELVGENKVTLMSVREGISMLKQKLQRKKIILILDDIDQQEQLDALAGNLDWFSPGSRVIITTRDTSLLSRYEDRITYELDKLNDKDSLELISFKALKTNKVDRSYLDILSSVVTYASGLPLALEVMGSNFLGKSIEQWKSALDQYRKIPNKKIQNVLKVSFDGLEEFEKEIFLDIACCFKECELTDVKRILCAHHNVDSLEYGLKVLVEKSLIKMDAYRGIILHALIQDMGREIVRQESPKKPGKRSRLWLLEDIVQVFEMNMGSDKIEMIHMDFPKFEKVIRWDGEAFKKMRNLKTLFIRHTYFSQGPKYLPNCLRVLNWEEYPSPCLPLDFHPEGLVIFQLSGKSIQSVRFLEKQKYMSLTVINLDHSNVEEIPDISGVPNLVNLSLNMCLKLIKIHESIVFLDRLGVLSAQGCRRLKRFPSIKLTNLVHLCLSGCSSLEHFPKMLGKLKNILTIYSDGTLIKELPSAIKRFCLISHSSMIKHGASSPPALSSPIVMSPDEEKVTSERSEVDVEEEQGSPMAPLEAKHSACKLPDLLHESFTTYLTWFRNVEDLDLSEHNFTVLDESLKELCSLRSLSLNGCRELREIKGIPPNIKYFSARNCISLTYASKNMLLNKELHEDGAKDFVLPSSSIPNWVEHSSNNDSISFWFRNKLPEISLCVLVGPAVDFSCTHICPEFIINSSRGQAEHLESVETSNQLVDHIFITDPKLMKSKVNEVILENEWNHVVCKIKSCGQRGIAIKKLGIYFHKDRSSMENIQFIDPLLHKEELIMGNFQVNMQQQKYMASHERRLSLDLPLGMSFSLNDHVSREPNSSVQGNLH 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00079 1099 PANTHER ARCHAEAL ATPASE 28 1009 - -
Adu05g00079 1099 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Adu05g00079 1099 SUPERFAMILY "Winged helix" DNA-binding domain 426 534 IPR036390 -
Adu05g00079 1099 Gene3D - 16 179 IPR035897 -
Adu05g00079 1099 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1009 IPR044974 GO:0006952
Adu05g00079 1099 SUPERFAMILY L domain-like 556 899 - -
Adu05g00079 1099 SMART till_3 17 155 IPR000157 GO:0007165
Adu05g00079 1099 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Adu05g00079 1099 PRINTS Disease resistance protein signature 846 862 - -
Adu05g00079 1099 PRINTS Disease resistance protein signature 391 405 - -
Adu05g00079 1099 PRINTS Disease resistance protein signature 298 312 - -
Adu05g00079 1099 PRINTS Disease resistance protein signature 217 232 - -
Adu05g00079 1099 Gene3D Ribonuclease Inhibitor 539 763 IPR032675 -
Adu05g00079 1099 Gene3D Ribonuclease Inhibitor 784 917 IPR032675 -
Adu05g00079 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 450 IPR027417 -
Adu05g00079 1099 Pfam TIR domain 18 181 IPR000157 GO:0007165
Adu05g00079 1099 MobiDBLite consensus disorder prediction 762 786 - -
Adu05g00079 1099 Gene3D - 180 351 IPR027417 -
Adu05g00079 1099 Pfam NB-ARC domain 198 425 IPR002182 GO:0043531
Adu05g00079 1099 Gene3D - 356 440 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00079 Adu-Chr5 858018 862888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00079 18 752 WRKY Transcription Factor Family AT4G12020 29.843 3.46e-74 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00079 - - ahf:112747389 2143.62