Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00066 ATGGCTCCTCCGCCACCCGAAACGGTGATTGACATAAAGAACAGCAACAAGACCGCTCAACAAACAGTGGGTTTCAGCGGCGGTCTGGAGTTCTGGAACCTCACCTACACTGTGAGCAAGAAGTTGAAAGTGGAGGGGAAGTGGTCCAGTGAAGACGTGGACTTACTCCACGACATCACTGGCTATGCACCGAAGGGGTGCATCACGGCGGTGATGGGGCCCAGCGGTGCGGGGAAGTCGACGTTCTTGGACGGACTTGCTGGGAGGATAAAGAGTGGGAGCTTGAAAGGAAGGGTTTCATTGGATGGTGCAAGTGTGAGTGCAAGCTTGATCAAGAGAACTTCTGCATATATCATGCAGGACGATAGGCTTTTTCCTATGCTCACTGTTTATGAGACTTTGATGTTTGCTGCTGATTTTCGATTGGGGCCTCTCTCTCTTGCTGATAAAAGGCACAGAGTCGATAACTTGATAGATCAACTTGGCTTATCGACATCCAGGAACACGTACATAGGAGACGAAGGAACAAGAGGAGTTTCGGGCGGAGAGCGGCGGAGGGTGTCAATAGGAGTGGACATCATCCACGGTCCGTCTCTTCTCTTCCTAGACGAGCCAACCTCGGGGCTGGACTCCACAAGCGCACACAGTGTGATCGAAAAGGTTCACGACATCGCACGCAGCGGCAGCACCGTCATTCTCACCATCCACCAACCCTCTTCAAGAATCCAAATGCTCCTCGACCATCTCATCATCCTCGCCAGGGGCCAGCTGATGTTCCAAGGCTCACCTAATGACGTCACACAACATTTGACTCGCATGTCCCGCAGGGTCCCAAAGGGTGAGAACCCTATCGAACATCTCATTGACGTGATCCAAGAATACGATCAATGTGAGGTTGGAGTGGAGGCGCTTGCTGAGTTTGCACGCACCGGAATGAAGCCCCCTCCGTTGAAGGAGGGTGTGTCTGTGGAGCCGTCGCCATCGCCCTTGAGGGCATGGCATGGGCGTGGGTATGAGGAGAAGTCGTTGGAGGTGTCCGGGACGTCTCAAGTGAGTAGGAGAGTTGCGGATGAGTATGATCACAGTTTGAGGAGTCCGTACAACAAGAATTCGCAGTCGTGGAGCAGCAGCCACAGCGCTATGTTTCTCAAGTTCACTCCTTCACGACTCAGGAATAATAAAGAGTCCAAGCCACAAAATAATCCTGCAAGGCATGGTTCCTCACCAGGGTACTACACATACTCAAGCGAGATTCTGGCAGCGACACCAACCCCTCACAGCAGCGACTACACTGTGAATGAAAACGACTACCTCACCCCAGCAAACGGCGCTGCCTCGCCGGAGCAGCTGGGTCCGAAATTCGCCAACTCCTTCCTCTCGGAAACTTGGATCTTGATGCGGCGCAACTTCATCAACATCCGAAGAACTCCGGAGCTGTTCCTATCGCGCCTCATGGTACTCACCATCATGGGCTTCATGATGGCCACAATGTTTCACAACCCCAAACAGAATCTTCAGGGAATCACCAACCGCCTTAGCTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCCTCAAACGACGCCGTTCCCGCATTCATCCAAGAACGCTTCATCTTCATCAGAGAAACCTCTCACAATGCCTACAGAGCCTCTTCCTACACCATCGCCGGCTTAATCACTCACATGCCTTTTCTTCTCCTCCAAGCTTCCGTTTACGCCGCCATTGTTTGGTTTGCCCTAACCCTAAGAGGTCCTTTCTACTACTTCCTCATCGTCCTCTTCGTCTCGCTTCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCCGTTGTTCCCAACTATATACTAGGTTACGCTGCAGTCATTGCTTTCACTGCCTTGTTCTTCTTATTTTGTGGATACTTCTTGAGCAGCCATGATATACCGGTTTACTGGCGCTGGATGAACAAGATTTCCACCATGACTTACCCTTATGAAGGGCTACTAATGAACCAGTATCAGACAAACATTACTTTTGGGCACAACAATGGCATCAATATAACTGGTTTTGGAATCTTGAATAATCTTCACATTGGGACTGAGAAGTATAAGAAGTGGGAGAATGTGGGAATCATGTTAGGTTGGGCTGTGTTATATAGGCTTTTGTTTTACATGGTGCTTCGATTTGGATCTAAGAACCAGAGGTCCTAG 2193 0.5043 MAPPPPETVIDIKNSNKTAQQTVGFSGGLEFWNLTYTVSKKLKVEGKWSSEDVDLLHDITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIKSGSLKGRVSLDGASVSASLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLGPLSLADKRHRVDNLIDQLGLSTSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSSRIQMLLDHLIILARGQLMFQGSPNDVTQHLTRMSRRVPKGENPIEHLIDVIQEYDQCEVGVEALAEFARTGMKPPPLKEGVSVEPSPSPLRAWHGRGYEEKSLEVSGTSQVSRRVADEYDHSLRSPYNKNSQSWSSSHSAMFLKFTPSRLRNNKESKPQNNPARHGSSPGYYTYSSEILAATPTPHSSDYTVNENDYLTPANGAASPEQLGPKFANSFLSETWILMRRNFINIRRTPELFLSRLMVLTIMGFMMATMFHNPKQNLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGLITHMPFLLLQASVYAAIVWFALTLRGPFYYFLIVLFVSLLSTNSFVVFISSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPVYWRWMNKISTMTYPYEGLLMNQYQTNITFGHNNGINITGFGILNNLHIGTEKYKKWENVGIMLGWAVLYRLLFYMVLRFGSKNQRS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00066 730 Pfam ABC transporter 56 207 IPR003439 GO:0005524
Adu05g00066 730 Pfam ABC-2 type transporter 236 293 IPR043926 GO:0140359
Adu05g00066 730 Pfam ABC-2 type transporter 462 667 IPR013525 GO:0016020|GO:0140359
Adu05g00066 730 Gene3D - 37 309 IPR027417 -
Adu05g00066 730 CDD ABCG_EPDR 29 261 - -
Adu05g00066 730 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 279 IPR003439 GO:0005524
Adu05g00066 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 273 IPR027417 -
Adu05g00066 730 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 7 724 - -
Adu05g00066 730 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 724 - -
Adu05g00066 730 SMART AAA_5 65 264 IPR003593 -
Adu05g00066 730 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00066 Adu-Chr5 695806 698506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00066 49 293 Calmodulin-binding Proteins AT2G36910 26.210 1.35e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00066 K05681 - gmx:100804809 1105.89