Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00053 ATGGCAACACAAGCTGAATTTGAGCATCCTAGAAAGGCCTTTGGTTGGGCAGCTAGGGATACTTCTGGTGTTCTCTCACCTTTTAATTTCTCTAGAAGGGAAACGAGAGAGAATGACGTGGCATTCAAAGTTTTGTATTGTGGGGTATGCCACTCTGACATACACATGCTGAAAAATGAATGGGGCTTTTCCCTATATCCATTAGTTCCTGGGCATGAGATTATAGGCATAGTGACAGAGGTGGGAAGCAAGGTAAACAAGTTCAAAGTTGGGGACAAAGTTGGTGTTGGATGCATGGTTGGTTCTTGCCGCAAAAACACATGCAGAAACTGTAATGATGCTCTAGAGAACTATTGTCCACAAATGATTCTCACATATGGTGTCAAAGACACTGATGGCACCATCACCTATGGGGGCTATTCTGACTTAATGGTTGCTGATGAAAACTTTGTGGTTCGAATTCCTCAAGGCTTTCCTCTTGATGCTGCTGCTCCTCTCCTTTGTGCCGGCATCACAGTGTATAGCCCTCTTAGATATTATGGGCTTGACAAGCCTGGACTCCATGTGGGTGTGGTTGGTCTTGGTGGGTTAGGTCACATGGCTGTTAAGTTTGCCAAAGCTTTTGGGGTTAAGGTAACGGTCATCAGCACCTCCCCTGAGAAAAAGGACGAGGCAATTCAACTTTTAGGAGCTGATCACTTCCTTATAAGTCGTGACCATGATCAGATGCAGGCTGCAACGGGCAGTTTTGATGGTATTATTGACACAGTTTCTGCCTTCCATCCTTTATTGCCTCTAGTTAGTTTATTGAAGTGTCACGGGAAGCTTGTAATGGTTGGTGCGCCGGAGAAGCCTCTAGAGCTGCCAGTATTTCCTTTAATTATGGGAAGAAAGACAGTTGCGGGTAGTACCATTGGAGGGATGAAAGAGACACAAGAGATGATTGATTTTGCTGCTAAACATAACGTGAAACCTGAAATTGAGGTTATTCCTATTGATTATATTAACACAGCATTGGAGCGTCTACTCAAAGCTGATGTCAAATATCGTTTTGTCATCGACATTGGAAACACTCTAAAACCTTCCACTTGA 1092 0.4377 MATQAEFEHPRKAFGWAARDTSGVLSPFNFSRRETRENDVAFKVLYCGVCHSDIHMLKNEWGFSLYPLVPGHEIIGIVTEVGSKVNKFKVGDKVGVGCMVGSCRKNTCRNCNDALENYCPQMILTYGVKDTDGTITYGGYSDLMVADENFVVRIPQGFPLDAAAPLLCAGITVYSPLRYYGLDKPGLHVGVVGLGGLGHMAVKFAKAFGVKVTVISTSPEKKDEAIQLLGADHFLISRDHDQMQAATGSFDGIIDTVSAFHPLLPLVSLLKCHGKLVMVGAPEKPLELPVFPLIMGRKTVAGSTIGGMKETQEMIDFAAKHNVKPEIEVIPIDYINTALERLLKADVKYRFVIDIGNTLKPST 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00053 363 Pfam Alcohol dehydrogenase GroES-like domain 38 153 IPR013154 -
Adu05g00053 363 Gene3D - 169 325 - -
Adu05g00053 363 SMART PKS_ER_names_mod 23 353 IPR020843 GO:0016491
Adu05g00053 363 SUPERFAMILY GroES-like 9 201 IPR011032 -
Adu05g00053 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Adu05g00053 363 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 362 - -
Adu05g00053 363 Gene3D - 16 355 - -
Adu05g00053 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 324 IPR036291 -
Adu05g00053 363 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Adu05g00053 363 CDD CAD1 14 354 - -
Adu05g00053 363 PANTHER ALDEHYDE REDUCTASE 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00053 Adu-Chr5 581324 583782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00053 11 362 Monolignol Biosynthesis Gene Families AT4G37990 70.739 6.01e-173 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00053 - K23232 gmx:100816901 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00053 05 581324 583782 Adu05g00053 05 581324 583782 ECH