Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00047 ATGGATCAGATCCAATCAAACAATTTTCAGCAGCAATCACAAGCCCTAACAACAGAGCATAACGACTCAGTAATGGAAGATGCACAAGAGTCCTTGTTCGATTCAGTAGTATGCGATCCCAGTTCAAGACTACTACCAACTGGGCTCACAAGACCTGAAAACTCCGGGGAGGATTATGTCATGTTTGTGAATGCGGGAGAGGAAGCTACTAATGAAGCAGACGGTGGACTAACTTTCCTTGGTGACACCTTTTTCGAAGGTGGGAACGTTATGCGTACCAATGAGCAAATAGTGGAGGGTGGAGATTACCCATTTATCTATCAGTCAGCTCGGTTAGGAAACTTTTGTTACAGATTTGATAGTCTTCCTCCTGGAGATTATGTGGTTCTATCTGAACTGGATATCTTTGCAGCAGTTGGAGCTAATAAGCCACTACAGTTGGTTGACTCAAGGGTTTCTGTGAAAGATGATGGGATAATCCTCATAAGATTTGAAAGTATAAATGGACACCCTGTCATCAGTGGGATCTGCATTAGAAAACCAGGAAAACCAGCTGCTTCACAACTGACAAACGATTACGTTAAATGTAATTACTGTGCAGCGCAAATTGAAATTCCCGTGTCACAGATGAAGGTATTGCAGACAAAATCTACTGCAAAGTATCAAAACAAGATAAAAGAGCTCACAATGCAATGTGAGCTCAAGGCAAAGGAATGCTATGAGGCATGGATGTCATTAACTGCAACAAACGAGCAACTGGAAGCAGTCCAAATGGAACTTGACAATGTCACATTTAAGTCACTAACTACTGATCAAACTGTGGAGAAACAAGCTCATGAGCTGAGGAGCATTTCTAGCAGGTATGAAGTTGATAAGAAAAAATGGACAGAAGCAATTAGCAATTTACAGGAGAAATTGATGAAGAGTGATTATTGTCAACTTTCCCATGAAGCGCATGAATGTGTTGATTCAATCCCAGAATTAAATAAGATGGTATTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAATGAAGAGATGATAAAGAGAAAAAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGCCGCTGCCGTCCCTTGAATAAGGCTGAAATATCAGCTGGCTGTACTACAGTTGTGGATTTTGATGCAGCAAAGGATGGATGCCTTGGAATTTTGGCAACTAATTCCTCAAAAAAATCATTCAGATTTGACAGAGTATATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCCTCATCAATGGTAATCTCTGTATTGGACGGCTACAATGTTTGCATATTTGCTTATGGGCAAACAGGAACAGGAAAGACATTTACCATGGAGGGAACAGAGCTGAACAGAGGAGTAAATTATAGGACTCTTGAGCTGTTGTTCGATGTTAGCAAACAAAGGAGTGATACATTTTCTTATGACATATCTGTTAGTGTACTTGAGGTTTATAATGAACAAATCAGAGACCTATTGGCTACAGGATCAACATCAAAAAGGCTGGAGATAAAACAAGCCTCTGAAGGATCTCATCACGTTCCTGGTGTCGTAGAAGCTAAAGTTGAAAGCATTAAGGAGGTCTGGGATGTACTGCAAGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAATGTTAATGAGCATAGTAGTAGATCTCACTGCATGCTTTGTATAATGGTAAAGGCTAAAAATTTGCTGAATGGTGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCGGGTAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAGCGGCTTAAGGAAGCGCAAAATATCAATCGATCTCTTTCAGCTCTTGGCGATGTTATATCTGCTTTAGCAGCCAAGAGTAGTCACATTCCCTATAGGAACTCAAAATTGACACATTTACTTCAAGACTCTTTAGGGGGTGACGCCAAAACATTGATGTTTGTGCAAATCAGTCCATCGGACCAGGACTTAGGTGAAACTCTTAGCTCACTTAATTTCGCAACTAGAGTGAGGGGCGTTGAGTTAGGTCCTGTTAAGAAGCAAGTTGACACAAGTGAACTTCAAAAGACAAAAGCAATGCTTGAAAAAGCAAGGAGTGATTGCAGAGTGAAAGATGAATCAATACGGAAGCTAGAAGACAGTTTGCAAGGCATGGAGAGCAAGGCCAAAGGAAAGGATAGTATTCACAGAAATCTACATGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGTTGAAGACATCCATGCAAAACCAGTCAGAAAAACAAATTTCTCAATTGTCAGAGAAATTGAAGGGAAAAGAGGAAACATGCACTACTCTCCAACATAAGGTCAAAGAGCTAGAGAAAAAGATGAAAGAACAACTGCAGTCAGAAACATCAAGTTTTCAACAGCAGATCAAGGAGCTGGAGAGAAAACTTAAAGAGCAGAAAGAGAGCTCGGAGTCCTTGCTTCGGCAGCAGATCAAGGAGCTTGAGACAAAGCTAAATGAGCAGGAACAGAGGTCGGAGTCCTCGCTTCGTCAGCAGATGAATGAACTAGAGAAGAGGTACAACGAGAGAGAACTGCAGTGGCAACAACAACAACAACAAACTCATTGTTTTGTTGAAGCCGGAAAGGCCACACCCGATGTAGGTAAAAGCCGCATGAGCGGCGGTGAATATCCAAGTGAGAGTGAGGCTCGCATTTTAAAGAGTTCAAACTCAGTAAACCCCCCAACAAGTCAAGCTTCTACTAATCAGATAAGGAGCAAGAGGGAGTTTAGAGGCAATGAAGCAGAGAACAATTATGGCATTCCGACATCTTTACATGACAGAAGGGTGACAAGGAAATCTGATCCACCAAGGGTAGCTAGGGTTGTGAGGCCAACAACAAAGCCAGTGATTGCTGCTCAAGCAGCCCCAGTGTCTCATAAGAGAGCTAGCACTAGTAGGGATCAGGTTCAAGGAATTAAAGAGAGGGAAACTAAGAAGAAAATTTGGTCAAGATAG 3045 0.4158 MDQIQSNNFQQQSQALTTEHNDSVMEDAQESLFDSVVCDPSSRLLPTGLTRPENSGEDYVMFVNAGEEATNEADGGLTFLGDTFFEGGNVMRTNEQIVEGGDYPFIYQSARLGNFCYRFDSLPPGDYVVLSELDIFAAVGANKPLQLVDSRVSVKDDGIILIRFESINGHPVISGICIRKPGKPAASQLTNDYVKCNYCAAQIEIPVSQMKVLQTKSTAKYQNKIKELTMQCELKAKECYEAWMSLTATNEQLEAVQMELDNVTFKSLTTDQTVEKQAHELRSISSRYEVDKKKWTEAISNLQEKLMKSDYCQLSHEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYNEEMIKRKKLFNEVQEAKGNIRVFCRCRPLNKAEISAGCTTVVDFDAAKDGCLGILATNSSKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTELNRGVNYRTLELLFDVSKQRSDTFSYDISVSVLEVYNEQIRDLLATGSTSKRLEIKQASEGSHHVPGVVEAKVESIKEVWDVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNLLNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDAKTLMFVQISPSDQDLGETLSSLNFATRVRGVELGPVKKQVDTSELQKTKAMLEKARSDCRVKDESIRKLEDSLQGMESKAKGKDSIHRNLHEKIKELEGQIELKTSMQNQSEKQISQLSEKLKGKEETCTTLQHKVKELEKKMKEQLQSETSSFQQQIKELERKLKEQKESSESLLRQQIKELETKLNEQEQRSESSLRQQMNELEKRYNERELQWQQQQQQTHCFVEAGKATPDVGKSRMSGGEYPSESEARILKSSNSVNPPTSQASTNQIRSKREFRGNEAENNYGIPTSLHDRRVTRKSDPPRVARVVRPTTKPVIAAQAAPVSHKRASTSRDQVQGIKERETKKKIWSR 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00047 1014 SMART kinesin_4 367 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu05g00047 1014 MobiDBLite consensus disorder prediction 996 1014 - -
Adu05g00047 1014 Coils Coil 335 355 - -
Adu05g00047 1014 PANTHER KINESIN-LIKE PROTEIN KIN-14R 27 129 - -
Adu05g00047 1014 ProSitePatterns Kinesin motor domain signature. 591 602 IPR019821 GO:0003777|GO:0005524|GO:0007018
Adu05g00047 1014 Gene3D Kinesin motor domain 313 693 IPR036961 -
Adu05g00047 1014 Pfam Kinesin motor domain 375 690 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu05g00047 1014 Coils Coil 768 882 - -
Adu05g00047 1014 CDD KISc_C_terminal 367 693 - -
Adu05g00047 1014 MobiDBLite consensus disorder prediction 893 1014 - -
Adu05g00047 1014 ProSiteProfiles Kinesin motor domain profile. 369 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu05g00047 1014 Coils Coil 285 305 - -
Adu05g00047 1014 PANTHER KINESIN-LIKE PROTEIN KLP-3 129 1000 - -
Adu05g00047 1014 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 129 - -
Adu05g00047 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 698 IPR027417 -
Adu05g00047 1014 PANTHER KINESIN-LIKE PROTEIN KIN-14R 129 1000 - -
Adu05g00047 1014 Gene3D - 55 130 - -
Adu05g00047 1014 MobiDBLite consensus disorder prediction 912 935 - -
Adu05g00047 1014 PRINTS Kinesin heavy chain signature 443 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu05g00047 1014 PRINTS Kinesin heavy chain signature 641 662 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu05g00047 1014 PRINTS Kinesin heavy chain signature 592 610 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu05g00047 1014 PRINTS Kinesin heavy chain signature 561 578 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00047 Adu-Chr5 513896 519877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00047 341 712 Calmodulin-binding Proteins AT5G65930 42.971 4.96e-87 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00047 K10406 - gmx:100800016 1500.34