Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00010 ATGGAATTCGACGAGCAAGAGGAGCAAGAAGAAGAGCTGTGTGTGCCAGGAGGAACGGGTTATGACCCTATTGGAAACCCGACCCGGGTTAAAATGTCCGGTTCGGAACCCATGTTGGTGGTTCAACCCATGACCGTGAGGAACAACAACAACAACAACAACAGCAGCAACATGGTGAAGCCAAAATACAGAGAGTGTTTGAAGAACCATGCCGTGGGGATCGGCGGACACGCACTCGACGGTTGCGGCGAGTTCATGCCCGCCGGCACGGAGGGAACCCTCGACGCACTCAAATGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAGGAGACTGAGCTCGCCGGAGCAGGACCAGGAGGAGGAGGACCGTATCTCCTGACTCACCACCCCCACCACCACCAGCCGCCGCCGTTTGCGGCCTACTACCGGACACCGGCGGGGTACTTACACGTGAGCGGGGGGCAGCAGAGAGCGGGAACGCTGGCTCTCCCTTCGACCTCCGGAGCTGGAGGTGGAGGAACAGCGCGGGATTTCGAGCAGGAAGACGTGAGTGGCGGTGGCGGGGGCGGAGGAGGAGGGTCATCATCACGGAAGAGGTTCAGGACGAAGTTCACGCAGGAGCAGAAGGAGAAGATGCTGGAACTTGCAGAGAGATTGGGATGGCGGATTCAGAAACACGACGAGGGTGCGGTTCAAGAGTTTTGTAACGAGACGGGTGTGAAGCGGCATGTTCTCAAGGTTTGGATGCATAACAACAAACACACCCTCGCTTCATGA 783 0.5837 MEFDEQEEQEEELCVPGGTGYDPIGNPTRVKMSGSEPMLVVQPMTVRNNNNNNNSSNMVKPKYRECLKNHAVGIGGHALDGCGEFMPAGTEGTLDALKCAACNCHRNFHRKETELAGAGPGGGGPYLLTHHPHHHQPPPFAAYYRTPAGYLHVSGGQQRAGTLALPSTSGAGGGGTARDFEQEDVSGGGGGGGGGSSSRKRFRTKFTQEQKEKMLELAERLGWRIQKHDEGAVQEFCNETGVKRHVLKVWMHNNKHTLAS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00010 260 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 44 258 - -
Adu05g00010 260 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 62 112 IPR006456 -
Adu05g00010 260 MobiDBLite consensus disorder prediction 161 202 - -
Adu05g00010 260 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 199 255 IPR006455 -
Adu05g00010 260 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 44 258 - -
Adu05g00010 260 SUPERFAMILY Homeodomain-like 186 257 IPR009057 -
Adu05g00010 260 MobiDBLite consensus disorder prediction 1 20 - -
Adu05g00010 260 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 63 112 IPR006456 -
Adu05g00010 260 Gene3D - 186 260 - -
Adu05g00010 260 Pfam ZF-HD protein dimerisation region 62 113 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00010 Adu-Chr5 151113 152361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00010 59 258 ZF-HD Transcription Factor Family AT4G24660 55.500 2.63e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Adu05g00010 ZF-HD_dimer 8.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00010 - - aip:107639896 413.305