Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03386 ATGGAGGGGAGAGGGAGTAGTTTTGTGAAGAATGGGGAGCTGAGATTGCCTCCAGGATTCCGGTTTCACCCGACGGATGAAGAGCTGGTGGCTCAATACTTAAAGCGCAAGGTCTTCTCCTGCCCGTTGCCGGCCTCTTTCATTCCTGAGGTTGATATTTGCAAGTCCGATCCATGGGATTTACCAGGTGATTTGGAGCAAGAGAGGTACTTCTTCAGCACGAGGGAGGCCAAATACCCCAACGGGAACCGATCCAACAGAGCCACTAACTCGGGCTACTGGAAGGCCACGGGCTTGGACAAACACATCGCAACTTCAAAAGGCCACCAACTTATTGGCATGAAGAAGACTCTCGTCTTTTACAGAGGCAAGCCTCCTTATGGATCAAGAACAGATTGGATCATGCACGAGTATCGCCTTGTCTCCCACTCCCACCTGCTTCCCATGCAAAATTGGGTTCTCTGTCGCATATTCTTCAAGAGGAGAGCACCGGCTAATGCTAAGAATGTTCTACTGGATCACAATTCCCATTCGGCATCAGCATCAGAGGCCTTCACCATCAGCCATGAGGGCAGCAACTCTAAGGTGGTTTTCTACGATTTCTTGGCACAGAACAGGGCTGATTTGAACCGCGTGCCCCCTCCTGCTTCTTCGACCTCTGGCACCAGTGGAATCACCACCGAATCCGATGAGCATGAAGACAGCAGTAGCTGCAACAGCTTTCCTTTTTTCAGGTGA 738 0.5095 MEGRGSSFVKNGELRLPPGFRFHPTDEELVAQYLKRKVFSCPLPASFIPEVDICKSDPWDLPGDLEQERYFFSTREAKYPNGNRSNRATNSGYWKATGLDKHIATSKGHQLIGMKKTLVFYRGKPPYGSRTDWIMHEYRLVSHSHLLPMQNWVLCRIFFKRRAPANAKNVLLDHNSHSASASEAFTISHEGSNSKVVFYDFLAQNRADLNRVPPPASSTSGTSGITTESDEHEDSSSCNSFPFFR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03386 245 MobiDBLite consensus disorder prediction 211 226 - -
Adu04g03386 245 MobiDBLite consensus disorder prediction 210 245 - -
Adu04g03386 245 Pfam No apical meristem (NAM) protein 17 140 IPR003441 GO:0003677|GO:0006355
Adu04g03386 245 ProSiteProfiles NAC domain profile. 16 160 IPR003441 GO:0003677|GO:0006355
Adu04g03386 245 SUPERFAMILY NAC domain 12 160 IPR036093 GO:0003677|GO:0006355
Adu04g03386 245 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 7 245 - -
Adu04g03386 245 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 245 - -
Adu04g03386 245 Gene3D NAC domain 25 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03386 Adu-Chr4 121983266 121984826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03386 8 241 NAC Transcription Factor Family AT5G13180 61.789 7.09e-104 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu04g03386 NAM 2.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03386 - - aip:107635778 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03386 04 121983266 121984826 Adu04g03386 04 121983266 121984826 ECH