Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03384 ATGGGTTGCTTCTCTTGTTTCGATTCGAGGGAGGATCAGAAGCTGAATCCCCATGGCAAGCACGATCACGATCACGATCATCTTCGCAAGCAGCATCAGCAGCAGCAGCAGCACCCTCACCCATCCAATCAAGCTCTACCTTCTCACATCTCCCGATTGCCCTCTGGAGCAGACAAGTTGAGGTCCAGAAGTAACGGGGGCTCCAAAAGGGAGCTGCCTGCTCCCAAGGATGGGCCTGGTGTCCAAATTGCTGCTCAAACTTTTACCTTCCGTGAGCTTGCAGCTGCAACTAAGAACTTCAGGCCGGAGTCCTTCATAGGGGAAGGTGGTTTTGGAAGGGTCTACAAAGGGAAGCTGGAGAGCACTGGTCAGGTTGTTGCTGTTAAACAGTTAGACAGAAATGGTCTTCAGGGTAATCGGGAATTCCTTGTCGAAGTTCTAATGCTTAGTCTTCTACATCACCCTAACCTTGTGAATCTCATCGGATACTGTGCGGATGGTGAACAGCGCCTCCTTGTTTATGAATTTATGCCATTGGGATCATTAGAAGACCACCTTCATGATCTTCCCCCTGATAAAGAACCATTGGATTGGAACACTAGGATGAAAATAGCTGCAGGGGCTGCAAAAGGACTGGAATACCTGCATGACAAGGCAAATCCTCCGGTTATTTATAGAGACTTCAAGTCATCTAATATATTACTCGACGAAGGATACCACCCCAAGCTTTCTGACTTCGGTCTTGCAAAGCTAGGTCCTGTGGGTGACAAGTCACACGTTTCTACACGTGTGATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTCAAGTCCGATGTATACAGTTTTGGAGTGGTGTTCTTAGAGCTGATTACAGGCCGTAAAGCAATTGACAGCACCCAACCACATGGAGAACAAAACCTTGTCACATGGGCACGTCCACTGTTCAATGACCGTAGGAAGTTTTCAAAGCTGGCTGATCCAAGGCTGCAGGGGAGGTTTCCTATGCGAGGCCTTTACCAGGCTCTAGCTGTGGCATCCATGTGCATCCAAGAATCCGCTGCCACGCGTCCTCTGATTGGGGATGTGGTGACTGCCCTCTCCTATTTGGCCAACCAGGCATATGACCCCAACAATACTGGGCATGGTAATAGGGGCTCTGGTGATGACAAAAGGAACAGAGATGATAAAGGTGCAAGATTATTGAAAAATGATGAAGCTGGAGGATCTGGACACAGATGGGACTTGGAAGGATCTGAGAAAGATGAGTCTCCCAGAGAAACTGCAAGGATGTTGAACAGAGATCTTGACAGAGAACGTGCTGTGGCTGAAGCAAAAATGTGGGGAGAGAACTGGAGAGAAAAAAGAAGACAGAGTTTGGAACCAGGAAGTTTTGATGCTACTAATGTGTAG 1434 0.4805 MGCFSCFDSREDQKLNPHGKHDHDHDHLRKQHQQQQQHPHPSNQALPSHISRLPSGADKLRSRSNGGSKRELPAPKDGPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGKLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGEQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPNNTGHGNRGSGDDKRNRDDKGARLLKNDEAGGSGHRWDLEGSEKDESPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSLEPGSFDATNV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03384 477 Pfam Protein kinase domain 103 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03384 477 MobiDBLite consensus disorder prediction 458 477 - -
Adu04g03384 477 CDD STKc_IRAK 106 374 - -
Adu04g03384 477 MobiDBLite consensus disorder prediction 392 446 - -
Adu04g03384 477 ProSiteProfiles Protein kinase domain profile. 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03384 477 MobiDBLite consensus disorder prediction 381 446 - -
Adu04g03384 477 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Adu04g03384 477 MobiDBLite consensus disorder prediction 35 50 - -
Adu04g03384 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Adu04g03384 477 Gene3D Phosphorylase Kinase; domain 1 74 176 - -
Adu04g03384 477 MobiDBLite consensus disorder prediction 9 80 - -
Adu04g03384 477 MobiDBLite consensus disorder prediction 11 33 - -
Adu04g03384 477 SUPERFAMILY Protein kinase-like (PK-like) 84 372 IPR011009 -
Adu04g03384 477 Gene3D Transferase(Phosphotransferase) domain 1 177 393 - -
Adu04g03384 477 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 469 - -
Adu04g03384 477 PANTHER OS07G0668900 PROTEIN 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03384 Adu-Chr4 121906284 121911301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03384 1 464 Glycoside Hydrolase AT3G07070 56.009 7.08e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Adu04g03384 Pkinase 3.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03384 K13430 - tcc:18608901 816.994