Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03371 ATGCCGGAGCTTCGTAGTGGACCGCGGCGTGGTCGTGCTCAGGTAGGCCGTAAAATCGCTGAACCACCGTCTCCGGCGGCCAACTACGTGAAGACTCGAGCTGCGGTCGCCAGGGCGGCTGCGGCAGTGGCGACGGTGGCCGAGGAGAGGCCCAGGACTCGCTTGGCGGCGAAGAAATTGGAGCAGGAGGAGAAGCCAGTGATTGTGATATCGGAGGAGGAGGCCGAGAGCGACGTAGAGCGCGCGAAGAATAAGAAGAGCGAAGAGCGGATTGAAGTCGGCGTAATGGGTGACGAGAGTGGCGGGTTGAGTGCCAACAAGGGCGTTCAAGTGGGAGGATCACCTGTCTACAAGGTGGATAGGAAGCTGGGAAAAGGTGGCTTTGGTCAAGTCTTTGTTGGCCGTCGAGTTACCGGGGGTAATGATCGTAGTAGTGGCCCTGGGGCTACTGAGGTGGCTCTAAAATTTGAACATAGGAATAGTAAAGGCTGTAATTATGGCCCTCCTTATGAGTGGCAAGTTTACAACACCCTTGGTGGCAGTCATGGAATACCAAAGGTACACTATAAAGGAAGACAAGGAGAATATTATGTAATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTGTGGAACTCTTCAAGCCAGGCGATGCCTGCAGAAATGGTTGCATGTATAGCTGTTGAGTCCTTGTCAATCCTGGAGAAAATGCATTCAAGGGGATATGTGCATGGAGATGTAAAGCCAGAGAACTTTTTACTAGGCCAGCCAGGGACACCACAAGAGAAGAAATTGTACCTGGTTGACCTTGGATTAGCAACAAAGTGGAGAGACACCTCCAGTGGGCAGCATGTTGAATATGATCAACGTCCAGATATGTTTAGAGGGACTGTTCGATATGCAAGTGTTCATGCTCACTTGGGAAGAACTGCTAGTAGAAGGGACGATCTTGAATCTCTGGCATATACACTCATCTTCCTTCATAAAGGGCGGTTACCATGGCAAGGTTATCAGGGTGATAACAAGTCCTTCCTTGTTTGCAAAAAGAAGATGGGAACATCTCCAGAGATGCTCTGTTGCTTCTGCCCTCCTCCTTTTAGGCAATTTCTTGAGATTGTAGTGAACATGAAATTTGATGAAGAACCAAACTATTCCAAGCTAATCTCTCTTTTTGATGGTATGCTTGGTCCAAATCCTGCATTACGGCCGATTAACACTGAAGGTGCTCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATATTGAGGACGAGGATGATTCACAACCCAAAAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATTTCAGTTTACAATGCCAGACTACCAATGAAACAAAGGTATCACTATAATGTAGCTGATGCAAGACTAGCACAGCATGTTGAGAGGGGGATTGCAGATGGCCTTCTTATTAGTTGTGTTGCATCTTGTTCCAATCTCTGGGCACTTATTATGGATGCTGGAACTGGTTTTACAACTCAAGTTTACAAGTTGTCACCATTTTTCTTACACAAGGAATGGATTATGGAGCAGTGGGAAAAGAACTATTATATTACTTCAATAGCTGGCGCTAATAATGGAAGCTCTCTTGTGGTGATGTCAAAAGGCACGCAGTACACACAACAATCATACAAAGTAAGTGATTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCATGTCACCTCGATGGCCACTGCCGGAAGTCGCTGGGGTGTTGTTATGTCTAGAAATGCTGGATTCAGTGACCAGGTTGTTGAGCTTGATTTTCTCTATCCTAGTGAGGGAATCCACAGACGATGGGATAATGGTTACAGGATTACAGCAACTGCTGCTACATGGGATCAATCTGCTCTTATATTAAGTATTCCAAGGCGCAGGCCAGGTGATGAAACTCAGGAAACACTACGCACATCTCAATTTCCCAGCACACACGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCTTGTTTGTGCTATGGGCGCACTGAGAATTTGCCATACTGCAAATTCTTTAAATGGCTGGATGAAGTTGTTGGGGATGAAGAAGTTATAAAAAGTGGAAAGCATGGCGTCATGGGTTCTGTGAAGAGGAAGTCTGCAGAACAAGAACAGCTGGAAATTCCTCCTTCTCAGAAGCAGAAGCAGCAAACCTCAAACGACGATTCCGTCGTCGAAGAGGGGTGCGGCTGCGTCCACCACGTGTCCTATCCGGAAGGTTATGTTCCCAATCCCAGTGGCAGCAGCAACCCAAAGTCGTCGGAGCCAGCTAAGAAGTTCCCGTTCCCTCTCGATCCCTTCCAGTCCCAAGCCATTGCTTGCCTCGAAAACAATGAATCCGTCATGGTATCTGCTCATACATCTGCCGGGAAAACAGTGGTGGCCTCATACGCCATTGCCATGTCTCTGCGCAACGGACAGCGCGTTATCTACACTTCCCCTATCAAGGCCCTTAGCAATCAGAAGTACAGGGACTTCAAAGAAGAGTTCTCCGATGTCGGCCTTATGACCGGTGATGTCACAATCGATCCCAATGCTTCCTGCTTGGTCATGACCACCGAAATATGGCGCAGCATGCAGTACAAGGGCTCTGAGGTCACCAGGGAAGTTGCCTGGATCATATTCGATGAGGTCCACTACATGCGCGATCGCGAAAGGGGTGTCGTTTGGGAAGAGAGCATTGTTATGTCCCCCAAGAACGCTCGTTTTGTATTCCTATCTGCCACCGTGCCCAATGCAAAGGAATTTGCTGATTGGGTGGCAAAGGTGCATCAACAGCCTTGTCATATTGTTTATACTGATTACCGACCAACTCCACTCCAGCATTATATTTTTCCCGCGGGAGGTGATGGCCTATATTTGGTTGTAGACGAAAAGGGGAAATTCCGCGAAGACAGCTTCCAGAAATCACTGAATGCTCTTGTTCCTCCTAATGAGGGTGATAAGAGAAAAGAAAACGGCAAGTGGCAAAAGGGTTTGGTGCTGGGAAGACTGGGTGAAGAAAGTGACATATTCAAGATGGTGAAAATGATCATTCAGCGTCAATACGATCCTGTGATACTGTTTAGCTTTAGCAAGAGGGAGTGTGAGTTTCTTGCGATGCAGATGGCAAAAATGGATCTTAATGGAGTTGAGGAGAAGGACAGCATAGAAAAAATATTTTGGAGTGCCATGGATATGCTTTCAGACGATGATAAGAAATTACCGCAGGCAATTTTTCACTTCCGTTCTTATGGATTTGATCAGGTTTCAAACATGCTACCGTTGCTGAAACGTGGAATAGGAGTGCATCATTCTGGCTTACTTCCAATTCTAAAGGAAGTGATCGAGATTTTATTTCAAGAAGGACTAATAAAGTGTTTGTTTGCAACAGAGACCTTCAGCATTGGTTTGAACATGCCTGCAAAAACTGTTGTTTTTACCAATGTCCGAAAATTTGACGGGGATAAGTTTAGGTGGTTGTCTAGTGGAGAATATATTCAGATGAGTGGCCGAGCTGGTCGACGAGGTATTGATGAACGTGGAATATGTATCCTCATGGTTGATGAGAAAATGGAACCTTCAACTGCTAAAATGATGGTTAAAGGGGCAGCTGATAGTTTGAACAGTGCCTTTCATTTGAGCTATAACATGATTTTGAATCAAATGCGCTGTGAAGATGGTGATCCAGAAAATTTGCTCCGAAATTCCTTTTATCAGTTCCAAGCTGATCGTGCCATTCCTGATCTTGAGAAACAAATAAAGATTCTTGAGGAAGAGAGGGAATCAATTGTTATTGAGGAGGAAAATAGTTTAAAGGATTATTACGATCTGCTGGATCAGCACAGAAGCTTGAATAAGGAGGTTCATGACATTGTAATATCTCCAAGGCACTGCTTACCATTTTTACAGCCTGGGAGGCTTGTTTCACTTCATTGTACTTCATGTGATGAAGATCATCACCCAATTTTTTCGGAGGACAAGTTGACTTGGGGATTGGTGATTAATTTTGAAAGAGTTAAAAGTAATGCTGAAGATGATGCAACCATAAAGGCAGAAGATGCGTCTTACATGGTTGATGTTCTTACAAGATGTGTGGTTACAAAAGATAAGATTGGCAAAAAGTCTGTTAGGATTGTTCCTCTTAAAGAACTTGGACAACCTCTGGTGGTTTCAGTTCCTATCTCTCAGATTAATACAATAACCAGTCTTCGTCTATATATACCAAAGGATCTTTTGCCATTGGAAGCTCGAGAAAACACACTAAAGAAAGTGTTGGAAACTCTTTCCAGATTTGGTGAGAAAGGTTTGCCTCTTCTAGATCCGGAAGAAGACTTGAAGATCCAGAGTAGCTCGTACAAAAAGTTATCCCGTAGGATAGAGGCTTTGGAGAGACTATTTGAAAAGCATGAAATTGCAAAGTCACCACTTATAAAGCAGAAGTTAAAAATGTTGCACAGGAAGCAAGAATTGACTGCAAAGATAAAGTCCATTAAGAAAACATTAAGATCTTCTAGTGCTTTGGCCTTCAAGGATGAACTTAAGGCAAGGAAGAGGGTTCTTCGCAGGCTAGGATATGCTACAGGTGATAATGTGGTCGAATTGAAAGGAAAGGTTGCCTGTGAAATTAGTAGTGCAGATGAATTAACCTTAACAGAGCTCATGTTCAATGGTGTCTTAAAGGACATAAAGGTGGAGGAGATGATTTCTCTCCTGTCATGTTTTGTCTGGCAAGAAAAAATTCAAGATGCTGCCAAACCCCGGGAAGAACTTGATCTGCTTTTTGTACAATTGCAAGACACTGCTCGGAGAGTTGCCCAACTTCAGCTCGAGTGCAAGGTGCAAATTGATGTTGAGAGTTTTGTGAAGTCATTTAGGCCGGATATTATGGAGGCTGTGTATGCTTGGGCAAAAGGTTCAAAGTTCTTTGAGATAATGGAAATTACACAGGTTTTTGAGGGTAGCTTGATTAGGGCAATTAGACGGCTTGAGGAAGTTCTTCAGCAACTAATAGAAGCAGCAAAGTCCATTGGGGAAACTCAATTAGAGGAAAAGTTTGAAGAAGCTGTTTCCAAAATCAAGAGGGATATTGTGTTTGCAGCATCCCTGTATCTCTAA 5139 0.4433 MPELRSGPRRGRAQVGRKIAEPPSPAANYVKTRAAVARAAAAVATVAEERPRTRLAAKKLEQEEKPVIVISEEEAESDVERAKNKKSEERIEVGVMGDESGGLSANKGVQVGGSPVYKVDRKLGKGGFGQVFVGRRVTGGNDRSSGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSSQAMPAEMVACIAVESLSILEKMHSRGYVHGDVKPENFLLGQPGTPQEKKLYLVDLGLATKWRDTSSGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMLCCFCPPPFRQFLEIVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNIEDEDDSQPKKKVRLGVPATQWISVYNARLPMKQRYHYNVADARLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFTTQVYKLSPFFLHKEWIMEQWEKNYYITSIAGANNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSIPRRRPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTENLPYCKFFKWLDEVVGDEEVIKSGKHGVMGSVKRKSAEQEQLEIPPSQKQKQQTSNDDSVVEEGCGCVHHVSYPEGYVPNPSGSSNPKSSEPAKKFPFPLDPFQSQAIACLENNESVMVSAHTSAGKTVVASYAIAMSLRNGQRVIYTSPIKALSNQKYRDFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAWIIFDEVHYMRDRERGVVWEESIVMSPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYIFPAGGDGLYLVVDEKGKFREDSFQKSLNALVPPNEGDKRKENGKWQKGLVLGRLGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGVEEKDSIEKIFWSAMDMLSDDDKKLPQAIFHFRSYGFDQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDERGICILMVDEKMEPSTAKMMVKGAADSLNSAFHLSYNMILNQMRCEDGDPENLLRNSFYQFQADRAIPDLEKQIKILEEERESIVIEEENSLKDYYDLLDQHRSLNKEVHDIVISPRHCLPFLQPGRLVSLHCTSCDEDHHPIFSEDKLTWGLVINFERVKSNAEDDATIKAEDASYMVDVLTRCVVTKDKIGKKSVRIVPLKELGQPLVVSVPISQINTITSLRLYIPKDLLPLEARENTLKKVLETLSRFGEKGLPLLDPEEDLKIQSSSYKKLSRRIEALERLFEKHEIAKSPLIKQKLKMLHRKQELTAKIKSIKKTLRSSSALAFKDELKARKRVLRRLGYATGDNVVELKGKVACEISSADELTLTELMFNGVLKDIKVEEMISLLSCFVWQEKIQDAAKPREELDLLFVQLQDTARRVAQLQLECKVQIDVESFVKSFRPDIMEAVYAWAKGSKFFEIMEITQVFEGSLIRAIRRLEEVLQQLIEAAKSIGETQLEEKFEEAVSKIKRDIVFAASLYL 1712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03371 1712 CDD STKc_CK1 117 392 - -
Adu04g03371 1712 SMART serkin_6 117 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03371 1712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Adu04g03371 1712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 1198 IPR027417 -
Adu04g03371 1712 SMART helicmild6 1095 1184 IPR001650 -
Adu04g03371 1712 Gene3D - 1315 1441 - -
Adu04g03371 1712 Pfam rRNA-processing arch domain 1238 1510 IPR025696 -
Adu04g03371 1712 SMART ultradead3 774 957 IPR014001 -
Adu04g03371 1712 PANTHER EXOSOME RNA HELICASE MTR4 721 1711 - -
Adu04g03371 1712 SMART DSHCT_2 1535 1712 IPR012961 -
Adu04g03371 1712 Coils Coil 1254 1274 - -
Adu04g03371 1712 ProSitePatterns Protein kinases ATP-binding region signature. 123 155 IPR017441 GO:0005524
Adu04g03371 1712 MobiDBLite consensus disorder prediction 1 26 - -
Adu04g03371 1712 Gene3D - 1245 1314 - -
Adu04g03371 1712 Gene3D Transferase(Phosphotransferase) domain 1 99 436 - -
Adu04g03371 1712 SUPERFAMILY Protein kinase-like (PK-like) 117 400 IPR011009 -
Adu04g03371 1712 Coils Coil 1453 1480 - -
Adu04g03371 1712 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 786 942 IPR014001 -
Adu04g03371 1712 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 721 1711 - -
Adu04g03371 1712 CDD SF2_C_Ski2 950 1196 - -
Adu04g03371 1712 ProSiteProfiles Protein kinase domain profile. 117 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03371 1712 CDD DEXHc_Mtr4-like 745 950 - -
Adu04g03371 1712 Gene3D - 1486 1712 - -
Adu04g03371 1712 Coils Coil 1667 1687 - -
Adu04g03371 1712 MobiDBLite consensus disorder prediction 709 738 - -
Adu04g03371 1712 Gene3D - 951 1216 IPR027417 -
Adu04g03371 1712 Coils Coil 70 92 - -
Adu04g03371 1712 Pfam DEAD/DEAH box helicase 780 927 IPR011545 GO:0003676|GO:0005524
Adu04g03371 1712 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1017 1227 IPR001650 -
Adu04g03371 1712 Pfam Protein kinase domain 117 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03371 1712 Gene3D - 745 950 IPR027417 -
Adu04g03371 1712 MobiDBLite consensus disorder prediction 719 738 - -
Adu04g03371 1712 Pfam DSHCT (NUC185) domain 1537 1707 IPR012961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03371 Adu-Chr4 121803137 121818363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03371 235 392 MAP Kinase Kinase Kinase AT5G50180 26.875 3.75e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Adu04g03371 Pkinase 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03371 K12598 - gmx:100804792 1722.98