Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03339 ATGAAGACAAGGGTATGTTGGAATCTGTGTTGGGTGCAGAAGCTGTTGCACCTTGTTTCCAATAATTTCGTCTCCATCGTGGTTGCTTCTGCTTTGACTTTGGCCGTAACTGATGCTGGCGTCTGGCGGTGGCTGTGCCAGGTTCTAGAGGGTTCCAAGTGGAATTACGCTATTTTTTGGTTGGTTGCTGGGCTGAAATATGGTGGCTCCGCCTTGATTTGGGGCGACGGCCAATGCTGCGATCCCAAAGGGGGCGAAGCTGGCGAGGGAGGATCTGAAGGGAATTGGAGTGGAGTTAGTAAGGGTGATGAAGAGGAGTTGCGAAAGAAGGTGCTGGAGAAGCTTGATGCATACTTTGCTTGCTATGTGTCGAAAGAGGCAAATTATGCAAGATTAGATAGGGTTTCGGAGTTGCATATGTTTTATTTGGCCTCAAAGTATTATATATTTGGTTTCGATTCGCCTTGTGGCCCTGAATCAAGATCATTACTTGGGAGATCAGTTGGTCTTCAAACGGTTGTTTTTGTGCCTCTTAAAGTCGGAGTTGTTGAGTTTGGTTCCGTAGAAACAATGCCAGAAGATCAGGGTGTTTTGGATTTGGTCAAGATAGCATTTTATGCGAAGTCAGGTGTTTCAACATCGGAGGGAAAGATGATACATACATTCTCCATAAGAGCGCAGGGCAGCAAGGCTGCTGTAATACAATTGAAGAAAAAGCTTGATGCATCCTTATCCTTAGCTAACAAATTTTGGACTAAATGTTGTTTGTGGTCATTGTTTCGCTCGGTCATGAAGGTGATTCACTTTCCTTCGCCATTGGATGTGGTGGAGTAA 834 0.452 MKTRVCWNLCWVQKLLHLVSNNFVSIVVASALTLAVTDAGVWRWLCQVLEGSKWNYAIFWLVAGLKYGGSALIWGDGQCCDPKGGEAGEGGSEGNWSGVSKGDEEELRKKVLEKLDAYFACYVSKEANYARLDRVSELHMFYLASKYYIFGFDSPCGPESRSLLGRSVGLQTVVFVPLKVGVVEFGSVETMPEDQGVLDLVKIAFYAKSGVSTSEGKMIHTFSIRAQGSKAAVIQLKKKLDASLSLANKFWTKCCLWSLFRSVMKVIHFPSPLDVVE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03339 277 PANTHER MYC 159 206 IPR045084 GO:0003700|GO:0006355
Adu04g03339 277 PANTHER MYC 26 159 IPR045084 GO:0003700|GO:0006355
Adu04g03339 277 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 159 205 IPR025610 -
Adu04g03339 277 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 45 152 IPR025610 -
Adu04g03339 277 PANTHER MYC 208 245 IPR045084 GO:0003700|GO:0006355
Adu04g03339 277 PANTHER TRANSCRIPTION FACTOR BHLH3 159 206 - -
Adu04g03339 277 PANTHER TRANSCRIPTION FACTOR BHLH3 208 245 - -
Adu04g03339 277 PANTHER TRANSCRIPTION FACTOR BHLH3 26 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03339 Adu-Chr4 121472934 121474111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03339 23 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 31.128 3.13e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03339 - - adu:107486784 405.986