Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03333 ATGGAACGTCAAGGTCGTTTCCTCTTTCAAAATTTCCAGCAACGAGAAGCAAGCTCTTCTGGTTCAAACAAGAACAAGAACAATAATAATAATGCACGTGGTGAAGAAGATCAATGGTTATTGCCACCTAACAAGGTGGTAGATATCATGCGACAGGTTCTACCATCCCATGCACAAATCTCTGAGGATGCATTAGAAGCAATGCAAGATTGTGTGTGTGAGTTTGTGACACGTGTGACTGTTGAGGCCAACAAGAAGTGCAAATCTGAGGGGAGGAAAACTCTTAGTGTTAATGACTTGTTATTAGCAATGAACGATGATTTGGCCTTAAATAAATATGCTGAGCTTCTTGCAATTTACTACGATCGTTACTCCCTCCAAAATCAGCCACCATTTTCCCCCCAAGGTATGGCAACAGAATCAGATCCTAGGTCGCCGCAGGTGAAGGCCACGCTGCGCCTTGGCTCAGAATCGTACTCCGTTCAGGCGAATAAAGGTTGTTTATCAGAGCAACTGGTTTCACTGAAAGAGGAAAGTATGAGCATATTGAAGGAGTTCATAACAAAGCATAACATCCCTCAAGATGTCCCTGATGAGCCATTAGAAGCTTCTTCAGAAGATGATGATGATACACCTGAGAAACCTCAAGTGAAGTCTAAGAAGACTAAGTTTACTTAG 678 0.4248 MERQGRFLFQNFQQREASSSGSNKNKNNNNNARGEEDQWLLPPNKVVDIMRQVLPSHAQISEDALEAMQDCVCEFVTRVTVEANKKCKSEGRKTLSVNDLLLAMNDDLALNKYAELLAIYYDRYSLQNQPPFSPQGMATESDPRSPQVKATLRLGSESYSVQANKGCLSEQLVSLKEESMSILKEFITKHNIPQDVPDEPLEASSEDDDDTPEKPQVKSKKTKFT 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03333 225 Gene3D Histone, subunit A 28 151 IPR009072 GO:0046982
Adu04g03333 225 MobiDBLite consensus disorder prediction 14 35 - -
Adu04g03333 225 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 41 104 IPR003958 -
Adu04g03333 225 PANTHER T2E6.7-RELATED 139 223 - -
Adu04g03333 225 MobiDBLite consensus disorder prediction 210 225 - -
Adu04g03333 225 MobiDBLite consensus disorder prediction 188 225 - -
Adu04g03333 225 MobiDBLite consensus disorder prediction 14 38 - -
Adu04g03333 225 SUPERFAMILY Histone-fold 38 128 IPR009072 GO:0046982
Adu04g03333 225 PRINTS CCAAT-binding transcription factor subunit A signature 68 86 - -
Adu04g03333 225 PRINTS CCAAT-binding transcription factor subunit A signature 87 105 - -
Adu04g03333 225 PRINTS CCAAT-binding transcription factor subunit A signature 107 125 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03333 35 131 CCAAT-HAP3 Transcription Factor Family AT1G21970 41.509 9.24e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Adu04g03333 CBFD_NFYB_HMF 3.1e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03333 - - rcn:112179275 123.635