Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03332 ATGGCAACAACGTCAATGGTGGGTGTTTCTGTTTCTGGGTTCCACAATCACCATTTTGCTTCTTCTAACTCAAACGCCGCCACAATTTCTTCTTGGAAGCCTGTGGTGGCTGTTCTCAGCAACAAGAACAAGATGAGGGTCCCTTTTGAGCTGAAGCAGGGGCAGTCTCGTATCTTCCACGAGCTTCCCTCTGGGCTAAGCATGGAGGTGATTGTGCAGAAGAAGAAGAAGAATGTTGAAGGAGAAGAGGAGAAAAAGTCACCTTTGGTTTTTGTTCATGGAAGCTACCATGCTGCTTGGTGCTGGGCTGAACATTGGTTACCTTTCTTTTCAGCTTCTGGCTTTGATTGCTATGCTCTTAGCCTCTTAGCACAGGGTGAAAGTGATGCACCCCATGGTTCGGTCGCTGGTACACTCGAGACGCATGCAAGAGATATTGCAGATTTCGTTCATCATAAAGTTCAGTCACCACCTATCTTGGTTGGACATTCATTTGGAGGACTTATCATTCAATATTATATCTCCTCTTTGGGAAGCAACAACCATGAAGAAAATACATATCCAATGCTTAGAGGAGCTATCCTTGTCTGCTCTGTGCCTCCTTCTGGTAACAGTGGTCTTGTCTGGCGATATCTCTTTACCAAGCCAATTGCTGCCTTCAAGGTGACACGCAGCTTGGCTGCGAAAGCTTTTCAAACCTCTCTTCCTCTGTGTAGAGAGACATTTTTCTCAGCCACAATGGAGGATCATATTGTTAAAAGATATCAAGAGCTAATGAAAGAAAGTTCGAGATTGCCATTGTTTGATTTAAGAAAGCTGAATGCATCACTTCCGGTTCCTTCGGCGCCAAACTGCCCTGTCGATGTCCTTGTTTTGGGTGCGAAAGATGACTTCATTGTGGACGCCGAAGGACTAAATGAGACGGCAAAATTTTACAGTGTGCCGCCGGTTTGTGTTGATGCCGTTGCGCATGACATGATGTTAGACGTTTCATGGGAAAAAGGAGCAAAAGTTATTCTGTCGTGGATTAATGGTTTGGACAACTCAAGGACTGCAACTGCACATCTCGGCAACGATTCGAGATTGACCAAAATGTTCACCTCAAGGAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAGTTTGAGGAGACAGCTGCACAGTACTTGTTTGATTTGGAGAACACTAATCAGGACCTGAAAAGTGATTTGAAAGATCTCTACATAAACCAGGCAATTCCGATGGACGTGGCTGGGAATCGCAAGGCTGTGGTCATTTATGTTCCTTTCAGATTGAGGAAGTCGTTCCGCAAGATTCATCTTCGTCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTTGTGTTGGTCGCCACAAGAAGGATCGTGCGTCCTCCAAAGAAAGGGTCTGCTGTTCAGCGGCCGCGTACCCGCACTTTGACTGCTGTGCACGATGCTATTCTTGAAGACGTAGTTTATCCTGCCGAGATTGTTGGCAAACGAGTCAGATACAGACTCGATGGATCGAAAATAATCAAAGTTTTCTTGGATCCGAAGGAACGCAACAACACTGAATACAAGCTGGAGACTTTCTCTGGAGTTTACAGGAAGCTTACCGGGAAAGATGTATCTTTTGAGTTTCCTATCTCAGAAGCCTAG 1668 0.4532 MATTSMVGVSVSGFHNHHFASSNSNAATISSWKPVVAVLSNKNKMRVPFELKQGQSRIFHELPSGLSMEVIVQKKKKNVEGEEEKKSPLVFVHGSYHAAWCWAEHWLPFFSASGFDCYALSLLAQGESDAPHGSVAGTLETHARDIADFVHHKVQSPPILVGHSFGGLIIQYYISSLGSNNHEENTYPMLRGAILVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTSLPLCRETFFSATMEDHIVKRYQELMKESSRLPLFDLRKLNASLPVPSAPNCPVDVLVLGAKDDFIVDAEGLNETAKFYSVPPVCVDAVAHDMMLDVSWEKGAKVILSWINGLDNSRTATAHLGNDSRLTKMFTSRKKIHKDNDAEPTEFEETAAQYLFDLENTNQDLKSDLKDLYINQAIPMDVAGNRKAVVIYVPFRLRKSFRKIHLRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVYPAEIVGKRVRYRLDGSKIIKVFLDPKERNNTEYKLETFSGVYRKLTGKDVSFEFPISEA 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03332 555 PANTHER 40S RIBOSOMAL PROTEIN S7 310 554 - -
Adu04g03332 555 Gene3D alpha/beta hydrolase 67 344 IPR029058 -
Adu04g03332 555 Coils Coil 391 411 - -
Adu04g03332 555 Pfam Alpha/beta hydrolase family 89 301 IPR000073 -
Adu04g03332 555 SUPERFAMILY alpha/beta-Hydrolases 81 345 IPR029058 -
Adu04g03332 555 ProSitePatterns Ribosomal protein S7e signature. 443 456 IPR000554 GO:0003735|GO:0005840|GO:0006412
Adu04g03332 555 Pfam Ribosomal protein S7e 371 550 IPR000554 GO:0003735|GO:0005840|GO:0006412
Adu04g03332 555 PANTHER 40S RIBOSOMAL PROTEIN S7 310 554 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03332 Adu-Chr4 121444264 121449318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03332 365 555 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.534 3.60e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03332 - - aip:107638205 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03332 04 121444264 121449318 Adu04g03332 04 121444264 121449318 ECH