Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03313 ATGGCATACTTGAAATCAAGATGGAAAAATGGGATTATTAGTAATTTGTGTATGGTTGTGGTGTGCATCATGGGTTGTGTGGAGTCCAACGATGATGAAGCTGCATACATGTTGAAGCTTCTCAATGCACTCAAACCCCCTGGCTGGTCCAACACCACTCACATGTGCCAGTGGATTGGCGTGAATTGCAACGATCAAAGTGGAAGGATTGAAGAGATCCATCTCAGTTCAATGTCGCTGACGGGAACAGTTCCTGAAGGCCTCAACGACTCCCTCTCCCAACTCGTAAACCTCTATCTCTTCAACAATAATCTGAGTGGGCCTGTTCCCTCTCTCGCCAACCTCTCCTTCCTCCAACAAGTGTACCTCGACAACAACAACTTCACCACCATCCCTCATGGTTGCTTCCAGGGTCTACCCTCTTTGACGTGGCTGTGGTTGGAAAACAACACCAACCTCACACCATGGACCTTCCCCGACTTGACTCAGTCCACACAACTGAAAGAGCTCAAACTTGCTGCTACAAATGTCATGGGCCCTCTACCAGAAATATTTGACTCCTTGACAAGTTTAGAGACTCTTCTTCTCTCCAACAACAGCCTCACTGGTGTCTTGCCTGAGTCTTTTGGAAGGTCCAAGATTGCCACCTTGCATCTCAACAACCAGAAGGATCACGGCATGTCAGGTACAATTGATGTCCTCTCAAACATGCTCGACTTATCTCAAGCATGGCTCCAGGGAAACTCGTTTACAGGACCTATTCCTGACATGTCTCATTGCACCTCCTTACAAGATTTACAACTTGACCACAATCAATTAACAGGTGTGGTCCCAGATTCTCTCATCGCTCTTCCAAACTTGGAATATCTTTATTTGGGCTATAACTTTTTGCAAGGTCCTCTACCAAATCTTACCTTCGGTGATTTTGATAGTATGGAGAATCTTGGTGTTAACACCACAAATGGCTTCTGTCACAAACATCCAGGACCTTGTGATCACAAACAAGTCACCACTTTGCTTCAAATTGCTGCGAATTTTGGGTATCCTCTCTTGTTGGCGAGATCTTGGCGAGGAAACAATCCATGTCAAAACTGGAGTTTCGTTGTGTGCGTTCAGAACAAGATCAGAACCCTGAATTTGACCAAACAGAATTTGACGGGGACCATCTCTACTGCATTTACAAACTTAACTGATCTGAGGGAGTTGTATCTCAGTGGAAATAATTTGAGCGGTCCAATACCAGAGAGCTTAACAGGTCTACCTCAACTTAAGGTTATTGATGTCTCCAATAACAATCTATCAGGGAACATACCCCATTTCTCACCTGATGTCACTCTCAATACTAAGGGTAATGTTCTGCTCATCAATGCTTCTCAGCCAACCACAGTTGCTCCATCTAAAGCTCCATTCTCACTTTCCTTGATTGCAGGCTTATCAGCAGCCAGTGTTGGAATTTTGGTAACATGTGCTGCGGTTATTTATAAAAGCAAGAGGTTACAGAAAATTCTGTTCAAGAAAACAATTGTTGATCACAATGTTGAGGATTTGATACAAAGTCATGGGTTGTACTATGACACATTTCATCCCACAATCCACTTCCAGATACCATCATCATCAGTATCACTCCCTAAACCAATGATCTCCCGCTGCAGCATAGTCCAATCTCACCACCCCAATTTCACAATTTCATACCTGATTGACTTATGTGGTCACTCTCCAAACACTGCTGCTCTTACTTCCCAAAAGCTTCACCTTCCTTCTGCTGAAAGACCAGACTCAGTTCTCACCCTTCTCAGGGAGCATGGTTTCACAGATACCCAAATTTCAAACCTCATCAGAAAACGCCCATTGTTCCTCTTAGCAAACCCAGATATCCTCTTGCCAAAGTTTCAATTTTTCCTCTCCATTAGGATTTCCAAAACCAACCTCGCAAGAACCCTAATCGCTGACCCAACCCTTTTGACCCAGAGCTTGAAGAAACAGATCATACCCTCTTACAATTTCCTCAAGAGTGTGTTGATTTCTGATGAAAAGGTTGCAGCTTCATTGAAGCGCACATCTTAG 2064 0.4399 MAYLKSRWKNGIISNLCMVVVCIMGCVESNDDEAAYMLKLLNALKPPGWSNTTHMCQWIGVNCNDQSGRIEEIHLSSMSLTGTVPEGLNDSLSQLVNLYLFNNNLSGPVPSLANLSFLQQVYLDNNNFTTIPHGCFQGLPSLTWLWLENNTNLTPWTFPDLTQSTQLKELKLAATNVMGPLPEIFDSLTSLETLLLSNNSLTGVLPESFGRSKIATLHLNNQKDHGMSGTIDVLSNMLDLSQAWLQGNSFTGPIPDMSHCTSLQDLQLDHNQLTGVVPDSLIALPNLEYLYLGYNFLQGPLPNLTFGDFDSMENLGVNTTNGFCHKHPGPCDHKQVTTLLQIAANFGYPLLLARSWRGNNPCQNWSFVVCVQNKIRTLNLTKQNLTGTISTAFTNLTDLRELYLSGNNLSGPIPESLTGLPQLKVIDVSNNNLSGNIPHFSPDVTLNTKGNVLLINASQPTTVAPSKAPFSLSLIAGLSAASVGILVTCAAVIYKSKRLQKILFKKTIVDHNVEDLIQSHGLYYDTFHPTIHFQIPSSSVSLPKPMISRCSIVQSHHPNFTISYLIDLCGHSPNTAALTSQKLHLPSAERPDSVLTLLREHGFTDTQISNLIRKRPLFLLANPDILLPKFQFFLSIRISKTNLARTLIADPTLLTQSLKKQIIPSYNFLKSVLISDEKVAASLKRTS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03313 687 SUPERFAMILY L domain-like 330 440 - -
Adu04g03313 687 SMART LRR_typ_2 284 308 IPR003591 -
Adu04g03313 687 SMART LRR_typ_2 139 160 IPR003591 -
Adu04g03313 687 SMART LRR_typ_2 396 419 IPR003591 -
Adu04g03313 687 SMART LRR_typ_2 420 447 IPR003591 -
Adu04g03313 687 SMART LRR_typ_2 260 283 IPR003591 -
Adu04g03313 687 SMART LRR_typ_2 115 138 IPR003591 -
Adu04g03313 687 SMART LRR_typ_2 188 211 IPR003591 -
Adu04g03313 687 Pfam Leucine Rich Repeat 190 210 IPR001611 GO:0005515
Adu04g03313 687 Gene3D Transcription termination factor 3, mitochondrial 570 687 IPR038538 -
Adu04g03313 687 SMART mt_12 609 639 IPR003690 GO:0003690|GO:0006355
Adu04g03313 687 SMART mt_12 644 675 IPR003690 GO:0003690|GO:0006355
Adu04g03313 687 Pfam Leucine rich repeat 260 295 IPR001611 GO:0005515
Adu04g03313 687 Pfam Leucine rich repeat 118 167 IPR001611 GO:0005515
Adu04g03313 687 Pfam Leucine rich repeat 374 433 IPR001611 GO:0005515
Adu04g03313 687 Gene3D Ribonuclease Inhibitor 333 457 IPR032675 -
Adu04g03313 687 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
Adu04g03313 687 Pfam Leucine rich repeat N-terminal domain 334 370 IPR013210 -
Adu04g03313 687 PANTHER OSJNBA0070M12.3 PROTEIN 19 506 - -
Adu04g03313 687 Pfam mTERF 595 680 IPR003690 GO:0003690|GO:0006355
Adu04g03313 687 PANTHER RECEPTOR-LIKE KINASE TMK4 19 506 - -
Adu04g03313 687 SUPERFAMILY L domain-like 49 324 - -
Adu04g03313 687 Gene3D Ribonuclease Inhibitor 30 316 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03313 Adu-Chr4 121181605 121225582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03313 73 610 Receptor kinase-like Gene Family AT4G08850 26.056 3.49e-25 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu04g03313 mTERF 4.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03313 - - aip:107635703 569.311