Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03311 ATGGGCTCCTTGCCAAACATATCCCATTCCTTCCCAACTATCAGATGGCTTTTTCTCTCTAACAACAACCTCTCCTCCATTCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGGGGGTCCTCTCTTTAGCCAACAACACCAACCTCCCACCATGGACCTTCCCCCTCCACTTGACTCGTTCCTCCTCATTGATATCCCTTGACCTCGAGTCCACAAATCTTATGGGATCACTACCAAACTTATCTCATTTCTTCCCCTACTTGGACACTGTTCAACTCTCCAACAACAACCTTACCTTCCTTCCCCAAGGTTGCTTCCAGGGTCTACCCAGTTTGCAGAGGCTCAAGTTGGGAAGCAACACCAACCTTGCACCATGGACCTTCCCCAACTTCACTCACTCCACAGAACTGGAAGACCTCAATCTTGTTGCTACAAATGTAATAGGCTTCCTACCAGCAGACATGCTAAAATCGTTGCCGAACTTGCAAACAATTCTTCTCTCCAACAACCACCTTACTGGGGTCTTGCCAGAGTCTTTCGGAGGATCTAAGGTTGTCACACTGCATCTCAACGATAATGGGTTTTGGGGTACAATAGATATCCTTTCAACCATGGTCGACTTGTCTGAAGCTTGGCTTCAGGGAAACTTCTTTGAAGGCCCAATTCCTGACTTGTCCCGTTCTACAGCTTTGCAAGATTTGCAACTTGCCCGCAACCGATTAACAGGTGTCGTTCCAAATTCTCTAACAACACTCGATTCGCTGCGAAGTATTTCTTTGAACGACAACTTTTTGCAAGGTCCTTTGCCCAAATTTGACCTTTTTTCTGAGGAGGATGTGAATCTTGGTGTTAACACAACAAATGGCTTTTGTCACAGAGATCCTGGACCTTGTGATCGCAAAGTGACCATTTTGCTTCAAATTGCTGCGGAATTTAAGTATCCACTTCAGTTGGCACGTTCATGGAAAGGAAATAATGCCTGTAAAGGTTGGCGTTTCATTACGTGTGATGACAAAAATAAGATCAGAATGGTGAATTTATCAAATCTGAAATTGACGGGCACAATCTCTCCTGCATTCGCCAATTTAACTGATTTGCGGGAATTGCATTTGGATGGCAATAATTTGACGGGTGAAATACCTCAAGGATTGGCAACATTGCCTGAACTAGAAGTTGTGAATGTCTCTAACAACCACCTTGCTGGAAATATTCCCAAATTCTCACCAAAGGTCAACTTTATTGCCACAGGCAATGATTTTCCTAATGCTTCCCACCATAGAATCTCAACTCCTTTCATTACAGTCGCTGTTTGTAATTATACTTTTCATTGCAAGCATGCAGGCGCAATAGTAGCAGCAGCAGGTATTGGAGGTCTTGTTTTCTTGGTTGTAGTTATTTGTAACCGAAAGAGGTGTCTTAGCTTGTTACAAAGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAACTTATGGATCTTTGATGTTAaggagatataattattctgaagtgaaaagcatgacaaactcatttcgtgataaattaggaaggggaggatatggcattgtatacaaagcatgcttaagtgatggttgtccggtagcagtgaaggtgttgaccgaatctagcggaagtggggaggaattcctaaatgaggtagctagtattggtagaacttctcatatgaacattgtctcgctgttgggattttgctatgaaaaatataaaagggcactcatctatgaattcatgccaaatggttctttggataagtttatctacaaacaagaatctcccaatgctatttgtaatttggattggaatacattgtttcaaattacaattggtattgcgcgaggattagaatatttgcaccgaggatgtgcggcaagaattttgcatcttgatattaaacctcaaaatattctgttagatgaagatttttgtccaaaaattgctgattttggattggcaaaaatatgcaaaaagaaagagagtattgtatctttacaaggtacaagaggaactcctggatacattgcaccagaagtatttagccgaacttttggtaaagtttctcacaaatctgatgtgtatagttatggaatgttgattcttgaattggtgggaggtagaaagaactacgacactggcggatcacttaccagtgaaatgtactttccagattggatttataaggatcttgaggagcaaaatatccttggacggggtttgtccactacagaagaagaaagtgatatgataaagaaaattactttggtgagtttatggtgcattcaaacaaatccattggatagaccagcaataaacaaagtagtagaaatgttagaaggaccacttcagtcagtgccatatcctccaaaaccTGTCTTATATTCTCCTCAAATGTCTATCTCACAATTTTCACAAATCTCCTATAACAGTACAGATGAGGAGGATTCTGAGATTGTTGAGGAGACTATTTCCATCAATAAAATGAGTTCAAAATTTGCAAAGTAA 2544 0.2728 MGSLPNISHSFPTIRWLFLSNNNLSSIPEGCFHNLTSLGVLSLANNTNLPPWTFPLHLTRSSSLISLDLESTNLMGSLPNLSHFFPYLDTVQLSNNNLTFLPQGCFQGLPSLQRLKLGSNTNLAPWTFPNFTHSTELEDLNLVATNVIGFLPADMLKSLPNLQTILLSNNHLTGVLPESFGGSKVVTLHLNDNGFWGTIDILSTMVDLSEAWLQGNFFEGPIPDLSRSTALQDLQLARNRLTGVVPNSLTTLDSLRSISLNDNFLQGPLPKFDLFSEEDVNLGVNTTNGFCHRDPGPCDRKVTILLQIAAEFKYPLQLARSWKGNNACKGWRFITCDDKNKIRMVNLSNLKLTGTISPAFANLTDLRELHLDGNNLTGEIPQGLATLPELEVVNVSNNHLAGNIPKFSPKVNFIATGNDFPNASHHRISTPFITVAVCNYTFHCKHAGAIVAAAGIGGLVFLVVVICNRKRCLSLLQRILWKKTGPFIDNEFEEFMKTYGSLMLRRYNYSEVKSMTNSFRDKLGRGGYGIVYKACLSDGCPVAVKVLTESSGSGEEFLNEVASIGRTSHMNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESPNAICNLDWNTLFQITIGIARGLEYLHRGCAARILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSLQGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELVGGRKNYDTGGSLTSEMYFPDWIYKDLEEQNILGRGLSTTEEESDMIKKITLVSLWCIQTNPLDRPAINKVVEMLEGPLQSVPYPPKPVLYSPQMSISQFSQISYNSTDEEDSEIVEETISINKMSSKFAK 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03311 847 ProSiteProfiles Leucine-rich repeat profile. 13 34 IPR001611 GO:0005515
Adu04g03311 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Adu04g03311 847 Gene3D Ribonuclease Inhibitor 2 56 IPR032675 -
Adu04g03311 847 Gene3D Ribonuclease Inhibitor 299 420 IPR032675 -
Adu04g03311 847 Gene3D Transferase(Phosphotransferase) domain 1 592 798 - -
Adu04g03311 847 CDD STKc_IRAK 523 793 - -
Adu04g03311 847 Pfam Leucine rich repeat 86 121 IPR001611 GO:0005515
Adu04g03311 847 Pfam Leucine rich repeat 136 194 IPR001611 GO:0005515
Adu04g03311 847 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Adu04g03311 847 ProSiteProfiles Protein kinase domain profile. 517 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03311 847 SUPERFAMILY Protein kinase-like (PK-like) 496 791 IPR011009 -
Adu04g03311 847 PANTHER TYROSINE KINASE FAMILY PROTEIN 57 829 - -
Adu04g03311 847 SMART serkin_6 517 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03311 847 SMART LRR_typ_2 85 108 IPR003591 -
Adu04g03311 847 SMART LRR_typ_2 109 130 IPR003591 -
Adu04g03311 847 SMART LRR_typ_2 11 34 IPR003591 -
Adu04g03311 847 SMART LRR_typ_2 363 387 IPR003591 -
Adu04g03311 847 SMART LRR_typ_2 159 182 IPR003591 -
Adu04g03311 847 SMART LRR_typ_2 35 56 IPR003591 -
Adu04g03311 847 Pfam Protein kinase domain 521 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03311 847 SUPERFAMILY L domain-like 4 407 - -
Adu04g03311 847 Gene3D Ribonuclease Inhibitor 57 288 IPR032675 -
Adu04g03311 847 Gene3D Phosphorylase Kinase; domain 1 490 591 - -
Adu04g03311 847 PANTHER RUST RESISTANCE KINASE LR10-RELATED 57 829 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03311 Adu-Chr4 121143500 121175656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03311 503 813 Receptor kinase-like Gene Family AT5G38280 59.683 4.21e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Adu04g03311 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03311 - - aip:107635702 1263.06