Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03308 ATGAAACCTCTTTGTCGTCTTCGCCGCCTATATTCCATATGGATGTTCATCTTGGCTCTTCTCGTCACGGCAACCGACGTTCCTACATCTGTAGGTGCTGCTGATAACGTTGATTACTTGGCGTGCAAGAACACTTTAAGCTGTGGAACCGTCAACCAACTCACTTACCCTTTCTGGGGTCAAATTGACAACACTAATAACAGGCCAAACTCTTGCGGTGAGCCTAACTTGCAGATCACATGTGAAGATAAAAACAATAATAATGGGGTCCCAAAGTTCACAGTGGATTCTGTCAAATACAGGATTCTTGATTGGGAGTGGGACATCAGTAAACAGAATCTGACAGTTGCTAGGGACGATTACTTTAGTACTAGCTTTGATTTCTGTTCAGGAGATTTCAGCAACAACACCTTGGATAAAACCATACTTCAATATGATGATAACAGTGTTGTTAATATCACACTCTTGTACAAGTGTTCTTCAGAAACAAAGCCTTCTTCGGATCAGTTTACGTTTGTTCAAAGTTGCAACAGCGGTAGTGTCTACTATGCTGAACAAGATGATAATAAGGCGCTGCCTTATTATGAAGGTTGCAGCACTGTTATTTTTCCTGTTTCAAAGTCCCTAGCTTCGGCTTTTGCTAACAGTGCCAGTAACCCCATTACTACTATAATTCAGCAAGCGTTGCAAGGTGGTTTTGTCTTGAAATTATTGCCTCAAATCAATGATAAGTGCAGGGGATGCACTAACTCAGGTGGCAATTGTGGCAGCAATGATGGACATTTCGTCTGTTACTGTAACGATGGAACTCATCAAAATTCTTGTTCAGGTAAAAGTACTAACAAAGCAGCTATTGCAGCAGGTGCTGCTTCAGGAGCTGTAGTCTTTGTTGTCCTTCTTATAGGTACACTTTTTGTGGTAAGAAGAAGGAGAAGAAATGCTGAAAGATCAAGAAGCAACAAGGATATTTTGCCTCTGAGTGGAGTCCCTCTTACATCTTCAACTACAAGTAGTAGTAACACATCTCAGAGTGTTTCTTCTTACCCTTCCTCCAAGTCTGATTCTGTGCCAAAGAGTTACTACTATGGTGTTCAAGTGTTTGACTATGCTGAACTTGAAGAAGCTACCAACAATTTTGACCCTTCTAGAGaacttggtgagggaggctttggcactgtttacaaagGTATGCTTCAAGATGGGCGTGTAGTTGCAGTGAAACGCCACTATGAAAGCCATTTAAAGCGTGTTGAGCAATATATGAATGAAGTTGAGATTCTAGCACACTTGAGGCACAAGAATTTGGTCACACTCTTTGGCTGCACTTCAAGACACAGCAGAGAACTCATCCTTGTTTATGAGTTCATACCTAATGGAACACTAGCCGATCACCTCCATGGAAGCCTTGCAAATTCCACCTTACTTACTTGGAATGTAAGATACAAAGTTGCACTCGAAACAGCCGAGGCGCTCTCCTACCTTCACTCTAAGAAAGTTATACACAGAGATGTTAAGTCCACAAACATTCTGCTGACAGAGACTTTTCAAGTTAAGGTTGGTGATTTTGGACTATCAAGGTTGTTTCCTAAATTTGTTACTCATGTCTCAACAGCGCCACAAGGCACACCTGGCTATGTTGATCCGGAGTATTACCAGAACTACCAACTAACTGATAAGAGTGATGTTTATAGCTTTGGAGTTGTGTTGGTTGAGCTTATATCTTCATTGCAAGCAGTGGACATAACCCGGAACCGGAACGAAGTTAACTTGGCTAGTCTTGCAGTGAATAGGATACAGAACCAAGAATTGCATGAAATGGTTGATCCATGTCTTGGATTTGAGAAGGACAATGATGTAAGGAGGATGGTAACTGCTGTTGCTGAATTGGCATTTAGGTGCTTGCAGCAGCAGAGAGATATGAGGCCCTCCATGGATGAAGTTCTTGAGATCTTGAGAGGGGTAAAGGGTGATGAGTTTGGTGCATTAGAGAGAAACTCATCAGAATCAGTGGTGGGTGTTAACCATAATAAGACAGAGGAGGTTATACTTTTGAAGAAGGTTCCACCACCAGTTTCACCAGATTCTGTTGCTGATAAATGGCAGTGGGACATGCTAAGAAGAACTGCTTAA 2130 0.4113 MKPLCRLRRLYSIWMFILALLVTATDVPTSVGAADNVDYLACKNTLSCGTVNQLTYPFWGQIDNTNNRPNSCGEPNLQITCEDKNNNNGVPKFTVDSVKYRILDWEWDISKQNLTVARDDYFSTSFDFCSGDFSNNTLDKTILQYDDNSVVNITLLYKCSSETKPSSDQFTFVQSCNSGSVYYAEQDDNKALPYYEGCSTVIFPVSKSLASAFANSASNPITTIIQQALQGGFVLKLLPQINDKCRGCTNSGGNCGSNDGHFVCYCNDGTHQNSCSGKSTNKAAIAAGAASGAVVFVVLLIGTLFVVRRRRRNAERSRSNKDILPLSGVPLTSSTTSSSNTSQSVSSYPSSKSDSVPKSYYYGVQVFDYAELEEATNNFDPSRELGEGGFGTVYKGMLQDGRVVAVKRHYESHLKRVEQYMNEVEILAHLRHKNLVTLFGCTSRHSRELILVYEFIPNGTLADHLHGSLANSTLLTWNVRYKVALETAEALSYLHSKKVIHRDVKSTNILLTETFQVKVGDFGLSRLFPKFVTHVSTAPQGTPGYVDPEYYQNYQLTDKSDVYSFGVVLVELISSLQAVDITRNRNEVNLASLAVNRIQNQELHEMVDPCLGFEKDNDVRRMVTAVAELAFRCLQQQRDMRPSMDEVLEILRGVKGDEFGALERNSSESVVGVNHNKTEEVILLKKVPPPVSPDSVADKWQWDMLRRTA 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03308 709 MobiDBLite consensus disorder prediction 316 356 - -
Adu04g03308 709 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 31 701 - -
Adu04g03308 709 Gene3D Phosphorylase Kinase; domain 1 350 455 - -
Adu04g03308 709 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Adu04g03308 709 CDD STKc_IRAK 385 651 - -
Adu04g03308 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Adu04g03308 709 MobiDBLite consensus disorder prediction 326 356 - -
Adu04g03308 709 Pfam Wall-associated receptor kinase galacturonan-binding 42 104 IPR025287 GO:0030247
Adu04g03308 709 ProSiteProfiles Protein kinase domain profile. 379 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03308 709 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 31 701 IPR044652 -
Adu04g03308 709 SUPERFAMILY Protein kinase-like (PK-like) 352 651 IPR011009 -
Adu04g03308 709 Pfam Wall-associated receptor kinase C-terminal 185 269 IPR032872 -
Adu04g03308 709 SMART serkin_6 379 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03308 709 Gene3D Transferase(Phosphotransferase) domain 1 456 660 - -
Adu04g03308 709 Pfam Protein kinase domain 382 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03308 Adu-Chr4 121124152 121131846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03308 147 700 Receptor kinase-like Gene Family AT1G25390 43.011 5.05e-143 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Adu04g03308 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03308 - - aip:107635700 831.247