Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03294 ATGATGATGTGGTTGGGTCTACAAAATGCGCTTCCGACAAATGCCTTCCGGTTCAAGCGTCATTTAACTGATTCGGACAGATGTTTGAGATGTAATGCAGATCTGGAAACAATGGAGCATTGTTTTAGGGATTGTGAGAAATCAAGATGCATTTGGCAAATGTTGGATCCTTTGCTTATTGATTCATTTGAAGGTACTCCCTTGGAATTTTGGATTCGGAAGGTCATGCCGGGCAATGAGGCAATTAAGCAAGCAAAGCAAATCATCGATGGAGTGAGTGGGAGAAACTGGCGCCAAAATTCTTCTTCTGCTTCTTCTCAACATTGCAACCAACAGTTCCACCGCACGCTTTTCACATTTCTCCATTCTCAGTTTGAAATGGCTTGGTTACGCTTGGATAATCGTTGCGATTCTGAATCTGTCGCTTCACTTCCATGGCTTTGGTCCATTCAACATGCTGCAAGCTGCAAGGAAATGGACGTGACTACTTTACAGAGTTTGGTTGATGTAGCCCTTGTTGGGGAAGATGGTTTCTGTGAAAAGACAAGGGAATTGATTTCTCTGAGATGTTTGGAGGCAATGTTTGATCCTGATTCAGCTCATAGAGTTGATTGTGATGATGCTGCTGCAACTAGCCTGGATTCGAGAGTTCGGTTTGCTTTTTCGACAACTTGTGGAGATGTCCTTCGACAGATAGTGGGCGAGGTACCAGTGTCAAATATAATAAAAGATCGAGTTAAGCTTTTGAAATGGGATGTTTCCCAGTTTATTTTGCATAAAAGAGCTGTTCTCAAATGTGACTTAGTGCAGCTGAAAGAATCAATCCTTGATGGTACTCATCCAAATGCTGATTGTTTAAGAGAAGCTGGGCGATTGCAACCTCAGAATGGGGGTTGTCAAGTGCATCTCAATGGCAATGCACACTGTGATCTTTCGAAAAAAGATAATGGGAACTGCACTTATCATGCAAACAAGGAAGTAAAAGAGAACTCAATAACTACAATGTTAGAGAAAGTGACTAAACAATGGAAAGAGTTACTTGAAAAGATTAAATCTTGCAAGAGGAACCAGGTTGAGTCCGTTAATGGTAATGAGCACATGACAGACTGCCAACAAGGAAAGCAAGTTGATATCAGTGAATGGCATGTTTTCCAAGGAAGTGCAAAGAAGATTAGACATAATGAATCTTTAAATGTTGAGTCCAATAAAGAGAAGCCAATCTCTCATGGAGTGGGTAGGTATGATAGGTGGTTTGCTTCCAAGCAATTAGACTCGAGAAGCCACAATGAGGTCCTTCATCATGAGCCACAAATTCCCTTTAGTGCTACAATGAGTCTTCAGCATAAATCTGGAGATGAATGCAATCAGGAACAGGAAGATGAACCTATTCCAACAAAAGTTTTGCCTGCAACTGGAATCCTTCATGGAAACGAAAATGATACTGTTTTTGAAGTTCCAAATGTAATTGGTGAGTCAGAGTCTAAAAGAACGGAAGTTCCTCAAGTGAGAGAACCAAATGCTACTGATGACAAAGCTGTGGAACATACTGTTAATGGTTGTGTGATAGAGGTATCAAGTGATGAAACAATGGGATCTGATAATGATATCTCAGAAAGTTCTAGTCTGAAAGAAACCAATGGTTGTATGAGGTGCAAAAAGGATGGTAAATTGCTGGTTTGTAGAACAACCACTTGTTCAACCATGATTCATGCAAGCTGTCTGACAACATCTCCTCATTTTGATGCAGAAGGGGACTTTTTCTGCCCATATTGTGTATATGCAAAATCTATTTCAATATATATTGAAGCTAAGACAAAGTTTTTCTTGGCAAGACAAGGACTAGAGAGGTTCATTTGCAATGATGTATGGAAGGTATCATAA 1881 0.4024 MMMWLGLQNALPTNAFRFKRHLTDSDRCLRCNADLETMEHCFRDCEKSRCIWQMLDPLLIDSFEGTPLEFWIRKVMPGNEAIKQAKQIIDGVSGRNWRQNSSSASSQHCNQQFHRTLFTFLHSQFEMAWLRLDNRCDSESVASLPWLWSIQHAASCKEMDVTTLQSLVDVALVGEDGFCEKTRELISLRCLEAMFDPDSAHRVDCDDAAATSLDSRVRFAFSTTCGDVLRQIVGEVPVSNIIKDRVKLLKWDVSQFILHKRAVLKCDLVQLKESILDGTHPNADCLREAGRLQPQNGGCQVHLNGNAHCDLSKKDNGNCTYHANKEVKENSITTMLEKVTKQWKELLEKIKSCKRNQVESVNGNEHMTDCQQGKQVDISEWHVFQGSAKKIRHNESLNVESNKEKPISHGVGRYDRWFASKQLDSRSHNEVLHHEPQIPFSATMSLQHKSGDECNQEQEDEPIPTKVLPATGILHGNENDTVFEVPNVIGESESKRTEVPQVREPNATDDKAVEHTVNGCVIEVSSDETMGSDNDISESSSLKETNGCMRCKKDGKLLVCRTTTCSTMIHASCLTTSPHFDAEGDFFCPYCVYAKSISIYIEAKTKFFLARQGLERFICNDVWKVS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03294 626 SUPERFAMILY FYVE/PHD zinc finger 542 596 IPR011011 -
Adu04g03294 626 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 138 619 - -
Adu04g03294 626 ProSiteProfiles Zinc finger PHD-type profile. 545 594 IPR019787 -
Adu04g03294 626 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 523 603 IPR013083 -
Adu04g03294 626 Pfam zinc-binding in reverse transcriptase 2 52 IPR026960 -
Adu04g03294 626 Coils Coil 336 356 - -
Adu04g03294 626 SMART PHD_3 547 592 IPR001965 -
Adu04g03294 626 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 138 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03294 Adu-Chr4 121029111 121034747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03294 521 593 PHD Transcription Factor Family AT5G12400 30.137 4.84e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03294 - - adu:107486924 1032.71