Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03265 ATGGCAACAAAACATAAGGGTCATGCGATAGGAATCGATCTTGGAACTACATACTCGTGTGTTGCAGCATGGGAAGAACAAAATGGTCGTGCAGAGATTATTGTGAATGATCAAGGCAACAGAACAACACCTTCTTTCGTTGCCTTCACTGATTCTCAAAGGTTGATTGGTGATGCTGCTAAAAATCAAGCCGCAGCCAACCCCTCTAACACCATCTTTGATGCTAAAAGGTTGATTGGCAGAAAATACAAAGATCCTGCAATTTACAATGATCTTAAGTTATGGCCATTCAAGGTTGTAGCTGGTGTTGATGACAAACCCATGATTATGGTGAACTACAAAGGCAGGGAAAAGTTTCTTGCAGCTGAAGAAATCTCATCTATGATTCTCACAAAGATGGACATTGCTGAGGCCTATTTGGAGTCTTCTGTGAACAATGCAGTGATTACAGTCCCTGCCTATTTCAATGACTCGCAGCGAAAAGCCACCAAAGATGCCGGCATCATCGCCGGCCTTAATGTCATCAGAATCATCAACGAACCAACAGCTGCAGCTCTTGCATATGGCCTTCAAAAGAGAGCCAAATGTTCCGGAAAGCGCAATGTTTTCATATTTGATCTTGGTGGTGGTATCTTTGATGTGTCTCTAGTCACAATTGAAGGTGATAACATTGAAGTTAAGGCCACTGCCGGAGACACTCATCTGGGAGGGGAAGATTTCGATAACAGAATGATGAGTCACTTGGTACAAGAGTTCAAAAGAAAGATCAGAATGGACAGTACTCGTGATCCCAGAGCAATGAGGAGGTTGAGAAACGAATGTGAGAAAGCGAAAAGGATACTTTCACATGCTAATGAGACTACTATTGAGATAGATGCTTTGTTTCAAGGCATTGACTTTCGTTTCTCTATAACTCGTGCAAGGTTTGAAGAACTCAACAGGGACTTGTTTGGGAAGTGCATTGAGATATCTCAGAAGTGCCTTGATGATGCTAAGATGGCCAAGAGTGATGTACATGATTTGGTCCTTGTTGGTGGATCTTCAAGGATTCCCAAAGTGCAGAGATTATTGCAGAAATTGTTTGAGGGGAAGGAGCTCTGTAAGAGTATCAACCCGGATGAAGCAGTTGCTTATGGTGCTGCAGTTCAAGCTGCTTTGTTGAGTGAAAATTATAGCATTGTACCAAACTTGGTTCTGGTGGATGTCACTCCTCTGTCTCTTGTTAGTGCTAAGGATGAAACAACTGGTAGCAAGAGTGGAATCACCATTACTAATGAGAAAGGAAGACTCTCAAGTGCTGAAATTAAGAGAATGATTGAGGAAGCTGCTGTGTTCAAGGAAGAGGATATGAAGTTCAAGAAGATGGTGGAAGCAAAGAATGATTTGGATGATTATATTTACAGGATGGAGAAAGCTATGAAGGATTTTGATTTAAGCTCTAAGGTTTCGGCTTCCGAAAAGCAGAGAATTATGGCTGCATTAAGAGAGGGAAAAAGATTGCTTCAGAGTGAGCATCAAACTGAAGCTTCTGTGTTTGAGAACTATCTTATGAAACTGATGATTTGGATTATTAAGAATGTTTAG 1584 0.4135 MATKHKGHAIGIDLGTTYSCVAAWEEQNGRAEIIVNDQGNRTTPSFVAFTDSQRLIGDAAKNQAAANPSNTIFDAKRLIGRKYKDPAIYNDLKLWPFKVVAGVDDKPMIMVNYKGREKFLAAEEISSMILTKMDIAEAYLESSVNNAVITVPAYFNDSQRKATKDAGIIAGLNVIRIINEPTAAALAYGLQKRAKCSGKRNVFIFDLGGGIFDVSLVTIEGDNIEVKATAGDTHLGGEDFDNRMMSHLVQEFKRKIRMDSTRDPRAMRRLRNECEKAKRILSHANETTIEIDALFQGIDFRFSITRARFEELNRDLFGKCIEISQKCLDDAKMAKSDVHDLVLVGGSSRIPKVQRLLQKLFEGKELCKSINPDEAVAYGAAVQAALLSENYSIVPNLVLVDVTPLSLVSAKDETTGSKSGITITNEKGRLSSAEIKRMIEEAAVFKEEDMKFKKMVEAKNDLDDYIYRMEKAMKDFDLSSKVSASEKQRIMAALREGKRLLQSEHQTEASVFENYLMKLMIWIIKNV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03265 527 Gene3D - 73 128 - -
Adu04g03265 527 Coils Coil 455 475 - -
Adu04g03265 527 SUPERFAMILY Actin-like ATPase domain 199 387 IPR043129 -
Adu04g03265 527 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 431 505 IPR029048 -
Adu04g03265 527 Coils Coil 267 287 - -
Adu04g03265 527 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Adu04g03265 527 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 398 459 IPR029047 -
Adu04g03265 527 PRINTS 70kDa heat shock protein signature 338 354 - -
Adu04g03265 527 PRINTS 70kDa heat shock protein signature 396 415 - -
Adu04g03265 527 PRINTS 70kDa heat shock protein signature 38 50 - -
Adu04g03265 527 PRINTS 70kDa heat shock protein signature 147 167 - -
Adu04g03265 527 PRINTS 70kDa heat shock protein signature 370 390 - -
Adu04g03265 527 PRINTS 70kDa heat shock protein signature 210 220 - -
Adu04g03265 527 PRINTS 70kDa heat shock protein signature 8 21 - -
Adu04g03265 527 PRINTS 70kDa heat shock protein signature 60 68 - -
Adu04g03265 527 PANTHER HEAT SHOCK 70 KDA PROTEIN 408 522 - -
Adu04g03265 527 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 407 - -
Adu04g03265 527 Gene3D Actin; Chain A, domain 4 236 319 - -
Adu04g03265 527 SUPERFAMILY Actin-like ATPase domain 8 192 IPR043129 -
Adu04g03265 527 Pfam Hsp70 protein 408 508 IPR013126 GO:0005524|GO:0140662
Adu04g03265 527 Pfam Hsp70 protein 9 407 IPR013126 GO:0005524|GO:0140662
Adu04g03265 527 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Adu04g03265 527 Gene3D - 460 523 IPR029048 -
Adu04g03265 527 Gene3D - 10 385 - -
Adu04g03265 527 PANTHER HEAT SHOCK PROTEIN 70KDA 4 407 IPR013126 GO:0005524|GO:0140662
Adu04g03265 527 PANTHER HEAT SHOCK PROTEIN 70KDA 408 522 IPR013126 GO:0005524|GO:0140662
Adu04g03265 527 Gene3D - 193 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03265 Adu-Chr4 120687759 120689610 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03265 1 519 Calmodulin-binding Proteins AT5G02500 60.385 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03265 K03283 - egt:105952709 600.127