Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03259 ATGGCCAAAAAATGTGAGGGACATGCAGTGGGAATAGATCTTGGAACAACATATTCTTGTGTTGCAGTGTGGCAGCAACAACATTCTCGAGCTGAGATCATACCCAATGACCAAGGCAACAGGACAACTCCTTCTTACGTTGCTTTCACTCATAATCAAAGGTTGATTGGTGATGCTGCTAAGAACCAAGCTGCCATCAACTCCACCAACACTGTCTTTGATGCTAAGAGGATGATTGGTAGGAAATTTGCTGACCCCAATATTCAGAAAGATAAAGTATTGTGGCCATTCAAAGTCATTTCTGGTGCTAATGGCGAACCAATTGTTTCTGTTAAGTACAAGGATCAGGAGAGACGCCTTTGTCCTGAAGAAATTTCAGCCATGGTTCTGACAAAGATGCGTGAGACTGCAGAGGCATATTTAGATTCACCTGTGGAGTATGCAGTCATTACTGTCCCGGCCTACTTCAGTGACTCGCAGCGCAAAGCCACCAGAGATGCCGGTGCCATTGCTGGTCTCACTGTCATGAGGTTAATCAATGAACCTACTGCTGCAGCTATTGCTTATGGCCTTGATAAGCGAGCTGGTAACTGTTCTGCAGAAAGGAATGTTTTGATCTTCGACCTTGGAGGTGGTACTTTTGATGTAACCCTCCTTACCATCAAGGATAAGTTGTTTGAAGTTAAGGCCGCATGTGGAAACACTCATCTTGGTGGGGAAGACTTTGATGACAGAATGTTGAAATACTTTATAGAAGAGTTTGAAAAGAAGAACAAAGTTGACATAAGTGGTGATTCAAGAGCCTTGAGGAGGTTGAGAAACGAATGCGAAAGGGCGAAAAGGACACTCTCAAGCTCCATTGATGCGTTCATTGACATAGATTGTTTATTTAAGGGTATTGACTTCTCTTCATCTATTACTCAAGCTAAGTTTGAGGAACTTAACAAGGACCTCTTTGAAGAGTGTATTGAGATAGTAAAAGAATGTGTTACCAATGCTGGTATAGACAAGAGGTGTATACATGAGGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCAAAAGTGCAACAACTACTGCAGGAATTCTTCCAAGGGAAAAATCTGTTCAAGGCACTTAATCCTGATGAAGCTGTTGCTTATGGAGCCGCCCTTCAGGCTGCTTTGTTAAGTGAAGGCTTTAAGAATGTTCCAAATGTGGTGGTGTGCGATGTTACTCCGTTGTCACTTGGTATATGTGAAAAAGTAGATATTATGAGCATAGAAATTCCTAGGAATTCTAGTATTCCTATAAAGAAGAAAACTAAATACGGCACAGTTGTGGATAACCAATCTTTTGCACGTGTTTTTGTTTATGAAGGTGAGAGGGCAAGAGCTAGTGATAACAACTTGCTGGGCCGATTTGTGCTTTCTGGTATTCCTCCTGCTCCTCGAGGCCATCCTATTATGATATGCTTCAATATAGACGAAGATGGTATCTTAAATGTATCTGCTGAAGAAGAAACTACTGGTAAAAGCAACGAGATTACCATAACCAATGATAAAGGGCGAATGTCGGCTAAGGAAATTGCAAGATTAATTCAGGAAGCTAAAATTTATGAGGCTGAAGACAGAGAATTTCTTGAGAAGGATGGAGCAATGAATGATTTGGATGACTATGTTTACAAAATGAGAAAAGCTTTAGAAGATATTGAAATGGACAAGGAAAAGATCGGTGATGCAATTGTTAAGGCCAAGAGTTTGCTTGATGATCACAAAGAGCAGCATAAAAAAGATGTGTTCGAGAAGAATATGAAGGATCTTGAGTTATATTCTGAATCACTAAATGCAAATCTGAAGAATATGATATTATCTTATACTATATTTTGA 1866 0.4025 MAKKCEGHAVGIDLGTTYSCVAVWQQQHSRAEIIPNDQGNRTTPSYVAFTHNQRLIGDAAKNQAAINSTNTVFDAKRMIGRKFADPNIQKDKVLWPFKVISGANGEPIVSVKYKDQERRLCPEEISAMVLTKMRETAEAYLDSPVEYAVITVPAYFSDSQRKATRDAGAIAGLTVMRLINEPTAAAIAYGLDKRAGNCSAERNVLIFDLGGGTFDVTLLTIKDKLFEVKAACGNTHLGGEDFDDRMLKYFIEEFEKKNKVDISGDSRALRRLRNECERAKRTLSSSIDAFIDIDCLFKGIDFSSSITQAKFEELNKDLFEECIEIVKECVTNAGIDKRCIHEVVLVGGSSRIPKVQQLLQEFFQGKNLFKALNPDEAVAYGAALQAALLSEGFKNVPNVVVCDVTPLSLGICEKVDIMSIEIPRNSSIPIKKKTKYGTVVDNQSFARVFVYEGERARASDNNLLGRFVLSGIPPAPRGHPIMICFNIDEDGILNVSAEEETTGKSNEITITNDKGRMSAKEIARLIQEAKIYEAEDREFLEKDGAMNDLDDYVYKMRKALEDIEMDKEKIGDAIVKAKSLLDDHKEQHKKDVFEKNMKDLELYSESLNANLKNMILSYTIF 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03259 621 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Adu04g03259 621 Gene3D - 547 611 IPR029048 -
Adu04g03259 621 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 610 - -
Adu04g03259 621 PANTHER HEAT SHOCK PROTEIN 70KDA 4 610 IPR013126 GO:0005524|GO:0140662
Adu04g03259 621 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Adu04g03259 621 PRINTS 70kDa heat shock protein signature 8 21 - -
Adu04g03259 621 PRINTS 70kDa heat shock protein signature 38 50 - -
Adu04g03259 621 PRINTS 70kDa heat shock protein signature 60 68 - -
Adu04g03259 621 PRINTS 70kDa heat shock protein signature 148 168 - -
Adu04g03259 621 PRINTS 70kDa heat shock protein signature 212 222 - -
Adu04g03259 621 PRINTS 70kDa heat shock protein signature 340 356 - -
Adu04g03259 621 PRINTS 70kDa heat shock protein signature 372 392 - -
Adu04g03259 621 PRINTS 70kDa heat shock protein signature 398 417 - -
Adu04g03259 621 PRINTS 70kDa heat shock protein signature 478 494 - -
Adu04g03259 621 Coils Coil 262 289 - -
Adu04g03259 621 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Adu04g03259 621 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 546 IPR029047 -
Adu04g03259 621 Gene3D - 73 128 - -
Adu04g03259 621 Gene3D - 10 387 - -
Adu04g03259 621 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 545 603 IPR029048 -
Adu04g03259 621 Gene3D - 194 369 - -
Adu04g03259 621 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 549 IPR029047 -
Adu04g03259 621 Pfam Hsp70 protein 9 609 IPR013126 GO:0005524|GO:0140662
Adu04g03259 621 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Adu04g03259 621 Gene3D Actin; Chain A, domain 4 238 321 - -
Adu04g03259 621 SUPERFAMILY Actin-like ATPase domain 200 390 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03259 Adu-Chr4 120612138 120614247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03259 1 601 Calmodulin-binding Proteins AT3G12580 62.131 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03259 K03283 - gmx:102667578 812.757