Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03242 ATGTTGCAAGGGAGTGTTGTTCCTGGTGTTGGACTGGTTATGGGTCACGGAGCTGGAGTTGGAGCTGAACCTGACACTGAAACCAAACTCTATATTTCTAACTTGGATTATGGTGTTTCCAACGAAGATATTAAGCTGCTGTTTGCAGAAGAGGGCGAGTTAAAGAGATACTCCATACATTATGACAAGAGTGGAAGATCAAAGGGGACAGCAGAAGTTGTCTTTGTGAGGAAGTCTGATGCTCTAGCAGCCATGAAGAAATACAACAACATGAAGCTTGATGGGAAACCATTGCAAATTGAGCTTGTTGGAACTACCGTCGTACCAGCTCCTGATGTTATACCTGTTGTTCAAAATAGCATATTGGGAAAACCAAGTAACTTCTTTGTATGTGGACAAGGAACGGTCGACGATAGAAGTTTCCAGAATGGCATTTTAGGTGACTACCATCGAACAATCCAGAATGGCATTTTAGGCGACTACCATCGAAGGGGCCTTAGTGACAGGATTGGAGGGAAGATCCCTATTGGAAGGAGGGTGTCTTCTAGAGATCTTGATGATGATTTGGAGAGGTATAACCAACGTCCAAGAGGTGGTCCAAGAGGCAGAGGCCGCAGAGAAAGAGAAACAAGGGACCAAAATAATGGAAAGCTATCTCGTAAAGATCTTGATGACGACTTGGAGCGGTATCGCATGGAGGCTATGCAACTAAAAAAGAAAAATCCAAACTGA 732 0.4385 MLQGSVVPGVGLVMGHGAGVGAEPDTETKLYISNLDYGVSNEDIKLLFAEEGELKRYSIHYDKSGRSKGTAEVVFVRKSDALAAMKKYNNMKLDGKPLQIELVGTTVVPAPDVIPVVQNSILGKPSNFFVCGQGTVDDRSFQNGILGDYHRTIQNGILGDYHRRGLSDRIGGKIPIGRRVSSRDLDDDLERYNQRPRGGPRGRGRRERETRDQNNGKLSRKDLDDDLERYRMEAMQLKKKNPN 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03242 243 MobiDBLite consensus disorder prediction 185 227 - -
Adu04g03242 243 PANTHER THO COMPLEX SUBUNIT 4A 25 193 - -
Adu04g03242 243 Coils Coil 220 240 - -
Adu04g03242 243 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 25 193 - -
Adu04g03242 243 SMART rrm1_1 29 101 IPR000504 GO:0003723
Adu04g03242 243 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 105 IPR000504 GO:0003723
Adu04g03242 243 SUPERFAMILY RNA-binding domain, RBD 22 103 IPR035979 GO:0003676
Adu04g03242 243 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 30 98 IPR000504 GO:0003723
Adu04g03242 243 Gene3D - 21 104 IPR012677 -
Adu04g03242 243 CDD RRM_THOC4 28 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03242 Adu-Chr4 120480950 120482918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03242 30 103 Eukaryotic Initiation Factors Gene Family AT2G23350 37.838 7.50e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03242 K12881 - gmx:100785926 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03242 04 120480950 120482918 Adu04g03242 04 120480950 120482918 ECH