Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03238 ATGGGAGAAGGAAAATCATCATCAGTAGCCATAGGAATAGACCTGGGAACAACGTACTCCTGTGTTGCAGTGTGGCGCCATGATCGAGTGGAGATCATAACGAACGACGAAGGGAACAGAATAACACCTTCTTGTGTTGCATTCACTGATACTCAAAGAATGATTGGAGATGCTGCTAAGAATCAAATTGCTTCCAACCCTACCAACACTGTCTTTGACTCAAAGAGGTTAATTGGTAGAAAGTTCAGTGACCCTCATGTCCAGAATGACATAAAACTCTGGCCATTTCAAGTCACTAATGTTGATGACGTTCCAAAAATTGTTGAGTACAAAAGTGAGAAAAAGTTATTCGCTGCCGAAGAAATTTCATCCATGATCTTAGCAAAGATGCGCGAAATCGCAGAGAAATTTCTTGGAACACAAGTAACGAATGCAGTTATTACGGTGCCTGCTTATTTCAACGACTCTCAGCGGCAAGCCACCAAAGATGCCGGCCATATCGCCGGCCTGAACGTAATGAGCATACTCAACGAGCCAAGTGCGGCAGCAATTGCTTACGGCCTCGACACTAAAGATCATTTTCATGGAATCAGAACTGTCTTCGTCTTTGATTTTGGCGGTGGTACTTTGGATCTTACTCTTCTCACAATTGACAACAAAGGGAACATAACCGTCAAGATCCATGGCGGAGACACGCATCTCGGTGGACAGGATTTTGACGCTGCAATGGTTGAATTCTTTGCGAGTGAGTTTCAGAGAAAGAAAAAGATCGATCTCAGAGGAAACAAAAGAGCCATATGCAGGTTGAAGGTTGCTTGCGAGAGAGCGAAGAGGAATCTCTCTTCAACAACTAAAGCTTCCATTGAGCTGGAATCTCTTCATGAGGGAATCGATTTCTACACATCAATCACTCGCGCTAAGTTCGAGGAAATCAACAAGAATCTCTTTGAGAGGTGCATGGAGCTTGTGCATAAGTGTTTCGAGGATAGTGACATGGCGAAAAGCAGCGTTGATGAGGTTGTGCTCGTTGGTGGCTCGACTAGGATTCCGAAATTGGAGCAGCGGTTGAAGGACTTCTTCGACGGGAAGGATCTTTGCAAGAAGTGCATCAATGCGGACGAGGCGGTTGCATATGGTGCTGCAATCCATGCTTCAAAACTGAGTGGTCACAAAAATGAAAAGATTCAAGATCTGACGCTCTGGGAAGTTACTCCTCTGTCCCTGGGCTTGAAAGAGCAAGGAGGTTTAATGAAAGTTATAATTCCAAGGAACACGATGATTCCTACAAAGAAGCAAGATCTGTTTACAACACAATTCCACAACCAAGAAATAGTCCAGATTCATATCTACGAGGGCGAGAGGAAAATTGCAAGCAACAACAACTTGCTGGGAAGTTTCGATCTGGAAATTCCTCCGGCACCGCGCGGCGTGCCGATGATTAATGTGTGCTTTGAAATAGATTCTAACAGTATCTTACATGTATCGGCGGAGGAAAGAGCAACGGGGGTGATGAAGAAGGTGTCTGTAGTGAGCAACAAAGGAAGATTGTCGAGAGAAGAAGTTGAGAGGATGGTGAAAGATGCTGAGAAGTACAAGGCTGAAGATGAAGAGCAGAGGCAGAAGGTTGAAGCAAGGAATGCTTTGGAGAATCTTGCTTACAATATGAGGAATTTGATAGAAGATGAACCCGTTGCTTCTGAGCTATCTGCAGAAGACAAGAAAAAGATTAACAAAGCTATTGATTATACATTGAAATGGATTGATGAGAGTGATTTTGCAACGGTGGATGAGTTTAAGAAGGAAGAGGAAGGTCTTTTGAGTGTGTTTCGTCCAATTATTTTGAAGATGATTGAAGATCTTGATGCTCGTGGTAGTGAAAGTGGAAGAAAAAGCTTGAAGAAACACAATTTTGAGGTAGTAGTCAGCGTTGTCACAGGGTTGGTTTCTGCTGTGTGTTCTGTTATCCAAGTAATTCAAAACATACTTTGA 1989 0.4329 MGEGKSSSVAIGIDLGTTYSCVAVWRHDRVEIITNDEGNRITPSCVAFTDTQRMIGDAAKNQIASNPTNTVFDSKRLIGRKFSDPHVQNDIKLWPFQVTNVDDVPKIVEYKSEKKLFAAEEISSMILAKMREIAEKFLGTQVTNAVITVPAYFNDSQRQATKDAGHIAGLNVMSILNEPSAAAIAYGLDTKDHFHGIRTVFVFDFGGGTLDLTLLTIDNKGNITVKIHGGDTHLGGQDFDAAMVEFFASEFQRKKKIDLRGNKRAICRLKVACERAKRNLSSTTKASIELESLHEGIDFYTSITRAKFEEINKNLFERCMELVHKCFEDSDMAKSSVDEVVLVGGSTRIPKLEQRLKDFFDGKDLCKKCINADEAVAYGAAIHASKLSGHKNEKIQDLTLWEVTPLSLGLKEQGGLMKVIIPRNTMIPTKKQDLFTTQFHNQEIVQIHIYEGERKIASNNNLLGSFDLEIPPAPRGVPMINVCFEIDSNSILHVSAEERATGVMKKVSVVSNKGRLSREEVERMVKDAEKYKAEDEEQRQKVEARNALENLAYNMRNLIEDEPVASELSAEDKKKINKAIDYTLKWIDESDFATVDEFKKEEEGLLSVFRPIILKMIEDLDARGSESGRKSLKKHNFEVVVSVVTGLVSAVCSVIQVIQNIL 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03238 662 SUPERFAMILY Actin-like ATPase domain 8 190 IPR043129 -
Adu04g03238 662 Pfam Hsp70 protein 10 616 IPR013126 GO:0005524|GO:0140662
Adu04g03238 662 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Adu04g03238 662 Gene3D - 11 384 - -
Adu04g03238 662 PRINTS 70kDa heat shock protein signature 37 49 - -
Adu04g03238 662 PRINTS 70kDa heat shock protein signature 370 390 - -
Adu04g03238 662 PRINTS 70kDa heat shock protein signature 59 67 - -
Adu04g03238 662 PRINTS 70kDa heat shock protein signature 208 218 - -
Adu04g03238 662 PRINTS 70kDa heat shock protein signature 397 416 - -
Adu04g03238 662 PRINTS 70kDa heat shock protein signature 9 22 - -
Adu04g03238 662 PRINTS 70kDa heat shock protein signature 477 493 - -
Adu04g03238 662 PRINTS 70kDa heat shock protein signature 145 165 - -
Adu04g03238 662 PRINTS 70kDa heat shock protein signature 337 353 - -
Adu04g03238 662 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 7 624 - -
Adu04g03238 662 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Adu04g03238 662 Coils Coil 518 561 - -
Adu04g03238 662 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Adu04g03238 662 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 549 IPR029047 -
Adu04g03238 662 Gene3D - 191 366 - -
Adu04g03238 662 SUPERFAMILY Actin-like ATPase domain 199 386 IPR043129 -
Adu04g03238 662 Gene3D - 72 125 - -
Adu04g03238 662 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 544 IPR029047 -
Adu04g03238 662 Gene3D Actin; Chain A, domain 4 236 318 - -
Adu04g03238 662 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 621 IPR029048 -
Adu04g03238 662 PANTHER HEAT SHOCK PROTEIN 70KDA 7 624 IPR013126 GO:0005524|GO:0140662
Adu04g03238 662 Gene3D - 545 618 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03238 Adu-Chr4 120460478 120462757 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03238 4 618 Calmodulin-binding Proteins AT3G12580 63.592 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03238 K03283 - osa:4339012 778.089