Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03232 ATGGGAGATGGAAGAGCATCGTCATCGGTAGCCATAGGAATAGATCTGGGAACAACGTACTCGTGTGTTGCAGTGTGGCGCAATGATCGAGTGGAGATCATAACTAACGACCAAGGGAACAGAATAACACCTTCTTGTGTTGCATTCACTGATACTCAAAGAATGATTGGAGATGTTGCTAAGAATCAAATTGCTTCCAACCCTACCAACCCGTCTTTGCGGCAAGCCACCAAAGATGCCGGCCTTATCGCCGGCCTGAACGTAATGAGCATACTCAACGAGCCAAGTGCCGCAGCAATTGCTTATGGCCTCGACACTAAAGATCACTTCCATGGAATCAGAACTGTCTTCGTGTTTGATTTTGGCGGTGGTACTTTGGATCTTACTCTTCTCACAATTGACAACAGTGGAAACATAACCGTCATGATCCATGGCGGAGACACGCATCTCGGTGGCCAGGATTTTGATGCTGCAATGGTTGAATTCTTTGCAAGTGAGTTTGAGAGAGAGAACAGGATTGACCTTAGAAGAAACAAAAGAGCCATATGCAGAATGAGGAGTGTGATCGAAGATGAAGCCATTGCTTCAGAGCTCTCTACACAAGACAAGGAAAGGATCAACGGAACTGTTGATTATGCATTGAAATGGGCTAATAAGAGTGCTTTTGCAACGTTGCATGAGTTTAAAGAGGTACAGAAAGGTCTTTCAAGTGTGTTTGATCCAATTATTTTAAAGATCATTGATGCTCGTGGCAGTCAAAGTGGAAGACTAATCTTGAAGAAATACAACTTTGAGGTAATAGGCAGCATTGTCAATGGGGTCGTTGGGGTGGCTCAGTTGGTTTCTACTGTGTGTTCTATTATCCAACTAATACAAAACATATCATCATGA 891 0.4355 MGDGRASSSVAIGIDLGTTYSCVAVWRNDRVEIITNDQGNRITPSCVAFTDTQRMIGDVAKNQIASNPTNPSLRQATKDAGLIAGLNVMSILNEPSAAAIAYGLDTKDHFHGIRTVFVFDFGGGTLDLTLLTIDNSGNITVMIHGGDTHLGGQDFDAAMVEFFASEFERENRIDLRRNKRAICRMRSVIEDEAIASELSTQDKERINGTVDYALKWANKSAFATLHEFKEVQKGLSSVFDPIILKIIDARGSQSGRLILKKYNFEVIGSIVNGVVGVAQLVSTVCSIIQLIQNISS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03232 296 PANTHER HEAT SHOCK PROTEIN 70KDA 8 70 IPR013126 GO:0005524|GO:0140662
Adu04g03232 296 SUPERFAMILY Actin-like ATPase domain 115 211 IPR043129 -
Adu04g03232 296 SUPERFAMILY Actin-like ATPase domain 9 106 IPR043129 -
Adu04g03232 296 ProSitePatterns Heat shock hsp70 proteins family signature 1. 14 21 IPR018181 -
Adu04g03232 296 Gene3D - 72 102 - -
Adu04g03232 296 Gene3D - 103 151 - -
Adu04g03232 296 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 184 257 - -
Adu04g03232 296 ProSitePatterns Heat shock hsp70 proteins family signature 2. 118 131 IPR018181 -
Adu04g03232 296 PANTHER HEAT SHOCK PROTEIN 70KDA 71 190 IPR013126 GO:0005524|GO:0140662
Adu04g03232 296 Gene3D Actin; Chain A, domain 4 152 208 - -
Adu04g03232 296 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 71 190 - -
Adu04g03232 296 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 8 70 - -
Adu04g03232 296 PRINTS 70kDa heat shock protein signature 38 50 - -
Adu04g03232 296 PRINTS 70kDa heat shock protein signature 10 23 - -
Adu04g03232 296 PRINTS 70kDa heat shock protein signature 60 68 - -
Adu04g03232 296 Gene3D - 1 71 - -
Adu04g03232 296 Pfam Hsp70 protein 72 211 IPR013126 GO:0005524|GO:0140662
Adu04g03232 296 Pfam Hsp70 protein 11 70 IPR013126 GO:0005524|GO:0140662
Adu04g03232 296 PANTHER HEAT SHOCK PROTEIN 70KDA 184 257 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03232 Adu-Chr4 120386670 120389163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03232 11 70 Calmodulin-binding Proteins AT3G09440 78.333 2.19e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03232 K03283 K04043 psom:113278701 169.474