Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03222 ATGATTGATAGTGTTGCTAACTTTGCACTGGACAATTTGTCACGGCTGCTTGTTAGTGAAGTGACTTTGCTTTCTAGCGTAAAAGATCAAATCAGGTCCCTAAATGATGAACTGAAGTTCATGAACATCTTTATCAAGAGTTCTGAAGGAAAACGTGAGGATCCATTTGTGAAAGAAGTGGTGAACCAAATCAGAAATGTAGCATACCAAGCTGAAGATGTAGTAGACACCTATGTCGTCAATGTCAACAATCAAAGAAGCAGAAACATGTTGGGGAAGTTCTTCCACAGCAAAGACCATGTGATGATGTTCCATGAGGATGTGGAAGAAGAGGAGATAGTAGGCTTGGTGCATGACTCTGATGAGGTGATTAACCACCTCGCCAGAAGAGGAGATTCGAGTCGTAGAGTTATTTGCATATTAGGCATGGGTGGCTTGGGAAAGACCACTCTTGCTCGAAAGATCTACAACAACAAGAAGATCAAGAGCATATTCCCGTGTCATGTGTGGGGTTTTGTGTCCAACGATTACAGAGCACAAGAATTACTACTGAGCCTTTTGAAGCTTTTGGGGTTATCCTCAGAGGAGTGTAAAGATTTAACTGATAAAGAGAAAATGAAAAGAAAAGTCAGAGAATGCATGAGTGGAAAGAAATACCTGGTAGTCCTAGACGATATCTGGAATATTCAAGTGTGGGACGAGTTGCAAGAAGTCTTTCCTGATGAAAACAATGGTAGCAGAATATTGATAACCACACGTATTGCAGATATCTCTCATTATACAAGAGCAACCTTCACCTATAGACTTCCATTTCTTGACGAAAGTCAAAGTTGGGAATTATTCTGTAAAAAGGTGTTTGGTAAAGAAAAATGTCCTCATGAACTTGAACTTCCTGGAAAAGAAATGGCTAACGCTTGTAAAGGTTTGCCACTTGCCATCATTGTGTTAGCCGGTATGGTTGCCAAAAAAGAGAGGTCACCAAGAGAATGGCTTAAAATCAAGAATCATGTTTCTTGGTATCTTGTTCAGGAGGAAGAATATCGAATTGAGACCAATATTCTGAAGCTTAGCTATGATGACCTTCCTCAAACATTAAAGCCATGCTTTCTTTATTTGGGAGTGTATCCTGAAGATTATGAAATCAATGTGAGAAGATTGTGTCAACTGTGGATAGCTGAAGGGTTCATTCAGAGAAAAGAAGTTGGACCATCAAATTCACCAGAAGTAGAAGATATTGCTGACATGTATTTAGATAAGCTGGTGGAACGGAGCTTGGTGCAAGTGGCAAGTAGGAGGACTGATGGGGGTGTGAAGACATGTCGAGTTCATGATCTTCTTCGTGACCTATGCATTTCAGAAAGTAGGGAAAATAAATTTATGGAAGTGTGCACAAATTTGGATGCTATTAAGTGTAATTCTCGTAGGATGTCTCTCCAGTATAGAGGAGAACTGAGGCTAACCGAAGATACCCAATCATCTGCACGCTCTCTGCTTCTGTTTGGTGAAAGCACTTTCTGGGAGAATGAATCAGAAGGGTGGAAACAGATAAAGAATGGCTTCAAGTTGGCTCGTGTATTGGACATGAACCAAGTGAGGCTATGTTTATCACCTCGTGGATTGACGACATTGATCCATCTAAGGTTTTTGAAAGTTACAGCATCTTCTAGAAGAATTGGAGATGATGTTTTAGCTTCTATATGCAACCTTTGGAATCTAGAAACGCTATACTTATGGATTAAAGACTCTATTACTCTACCAAACAAAATATGGAAACTCAAGTCACTCAGGCATGTGTATTTAAACTGTGATGATATATTTAGAGAAATGACTCAAGTAGAATCAATAATGCAGAGGATGAAAATGGAAGAAGCGTCGAAGATATTTAAAGGATGGTCTGGAGGAGCATCAATGTCGAAGATGAAAATTGGAGAAACAAAGGTGGAGAATCTTCAAACACTGCATAACATCTGTCTTAATGCAAGAACAGCAAGCGTCCTAAAAAAGGGCATGTTCCCCAACTTGACAAAATTAACTTTGCGTGGAGAGGTGACAGAGCTGCCAGAGGCACCAGAAAAAGAATTCTTAGAGAACAGTTTGTGGTGCCTAAACAAACTCCGAACGCTAAAGCTACTTGGCATTTCGAAGCTTCCATTAGATCGGGATGCGTATCCTACAAGTCTTACCAAGATTACCATATCCTTTGGTCAACTGGATGCAAGAATAATAAAGACCCTGGGACAGCTTGCCAACCTGCAAATCTTGAAACTCGGTGGCAGAGGCATATATGGCGATGTTGATTGCGTAGCTGGTGACTTCCCACAGCTTCGAGTACTACAGGTGTGGGGCTGA 2349 0.4061 MIDSVANFALDNLSRLLVSEVTLLSSVKDQIRSLNDELKFMNIFIKSSEGKREDPFVKEVVNQIRNVAYQAEDVVDTYVVNVNNQRSRNMLGKFFHSKDHVMMFHEDVEEEEIVGLVHDSDEVINHLARRGDSSRRVICILGMGGLGKTTLARKIYNNKKIKSIFPCHVWGFVSNDYRAQELLLSLLKLLGLSSEECKDLTDKEKMKRKVRECMSGKKYLVVLDDIWNIQVWDELQEVFPDENNGSRILITTRIADISHYTRATFTYRLPFLDESQSWELFCKKVFGKEKCPHELELPGKEMANACKGLPLAIIVLAGMVAKKERSPREWLKIKNHVSWYLVQEEEYRIETNILKLSYDDLPQTLKPCFLYLGVYPEDYEINVRRLCQLWIAEGFIQRKEVGPSNSPEVEDIADMYLDKLVERSLVQVASRRTDGGVKTCRVHDLLRDLCISESRENKFMEVCTNLDAIKCNSRRMSLQYRGELRLTEDTQSSARSLLLFGESTFWENESEGWKQIKNGFKLARVLDMNQVRLCLSPRGLTTLIHLRFLKVTASSRRIGDDVLASICNLWNLETLYLWIKDSITLPNKIWKLKSLRHVYLNCDDIFREMTQVESIMQRMKMEEASKIFKGWSGGASMSKMKIGETKVENLQTLHNICLNARTASVLKKGMFPNLTKLTLRGEVTELPEAPEKEFLENSLWCLNKLRTLKLLGISKLPLDRDAYPTSLTKITISFGQLDARIIKTLGQLANLQILKLGGRGIYGDVDCVAGDFPQLRVLQVWG 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03222 782 Pfam NB-ARC domain 120 360 IPR002182 GO:0043531
Adu04g03222 782 CDD RX-CC_like 3 111 IPR038005 -
Adu04g03222 782 PRINTS Disease resistance protein signature 213 227 - -
Adu04g03222 782 PRINTS Disease resistance protein signature 700 716 - -
Adu04g03222 782 PRINTS Disease resistance protein signature 137 152 - -
Adu04g03222 782 PRINTS Disease resistance protein signature 306 320 - -
Adu04g03222 782 Gene3D - 363 452 IPR036388 -
Adu04g03222 782 PANTHER - 37 780 - -
Adu04g03222 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 372 IPR027417 -
Adu04g03222 782 Gene3D Ribonuclease Inhibitor 458 782 IPR032675 -
Adu04g03222 782 Gene3D - 271 362 IPR042197 -
Adu04g03222 782 PANTHER DISEASE RESISTANCE PROTEIN RP 37 780 IPR044974 GO:0006952
Adu04g03222 782 Pfam Rx N-terminal domain 7 94 IPR041118 -
Adu04g03222 782 Gene3D - 95 265 IPR027417 -
Adu04g03222 782 SUPERFAMILY L domain-like 441 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03222 Adu-Chr4 120263044 120265534 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03222 136 449 WRKY Transcription Factor Family AT5G45050 26.101 5.36e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03222 - - aip:107635641 1430.23