Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03220 ATGGTGGACAGTGTTGATACTATTGCCTGGCAGAACTTGTCACGGCTGCTTGCTAATGAATTGATATCGCTTCCGGGAGTGAACGATCAAACTAGGTCTGTGAGAGAAGCAGTGAATCACAGCAGAGATATGGCATACACAGCTGAAGACATCGTTGATACTTATGCCGTCAATGTCAACATGCATAGAAGCAGAAACATGTTGGTGAAGTACTTTCACAGCAGAAACCAAGTGGTGAATAGGAAGTTGATAGCCATGATGAGCGGAGTCCGTGAGCTCTATGAAAAGACCTATAAAAACAATTCTATATATGGCATCCATCAAGGTGATTTTGAATGTTATACAAGAAATAAAGAATTTGCAAAAGACTCATTGATTGTAAAAAGGAGGGATGTGGAAGAAGAGGAGGTAGTAGGCATGGTGCGTGACTCCAATGAGGTAATTAGCCAACTTGAGGGAGGAGATTTGAGTCGTGGAGTTGTTTGCATATTAGGCATGGGTGGTTTGGGAAAAACCACTCTTGCTCGAAAGATCTACAACAATAACAAGATCAAGAGCATGTTCCCGTGTTGTGTGTGGGGTTTTGTGTCCAATTATTACAGCGCTCAAGAACTATTAATGAGCATTTTGAAGCTTTTGGATCTACCAGAAGAGGAGTACAAATATTTAACCAATCCAGAGCAAATGAAAAGAAAAGTCAGAGAATCCATGAGTGGAAAGAAATACCTGGTAGTTCTGGATGACATCTGGTATACTCAAGTGTGGGACGAGTTGCATGAAGCTTTTCCTGATGACAACAATGGTAGTAGAATACTGATAACCATACGTATGGAGAATATTTCTCGCTATACAAATGCAACCTTTACTTACAGACTCCCATTTCTTGATGAAACTCAAAGTTGGGAACTGTTCTATAACAAGGTGTTTTGCAAAGCAAGATGTCCTCCTGAACTTGAACCTGCTGGAAAAGAAATGGCTAAAGCCTGTAAAGGTTTGCCACTTGCCATTGTTGTGTTTGCAGGTATGGTTGCAAAAAAAGAAAAGTCACTCAGAGAATGGGATAGAATCAAGAATAATGTTTCTTGGTATCATACTCGCGAGGACTATCGAATTGTGACCGATATTCTGAAGCTTAGCTATGATTCCCTTCCTCAAATATTGAAGCCATGCTTTCTTTATTTGGGAGTGTATCCTGAAGATTATGAAATACCAGCGAGAACATTGTGCCAACTGTGGATAGCTGAAGGTTTCATTCAGGCAAGAGAGGCAACAGAAGCTGGACCATCAAATTCACAAGAAGTAGAAGATATTGCCGAGATGTATTTAGATAATCTTGTGGAACGGAGCCTGGTGCAAGTGGCAAGTAAGAGGAGTGATGAGGGTGTGAAGACATGTAGAGTCCATGCTCTTCTTCGCGAAATTTGCATTTCTGAGAGCAAAGAAAACAAATTTATGGAAGTATGCGAGGAGTTGGATGCCAATAGATGCAATTCCCGTAGAGTGTCTCTCCAGTATAAAGGAGAATGCTTGCCAACCACAGGTGACAAATGGCTTGCACGCTCTCTACTCTTTTTCGGTGAAGAGACTCCTTGGGAACGTGAATCACAAGGGTGGAAACAAATAAGGAATGGCTTCAAGTTGGGTCGTGTACTCGATATGAACCAAGTGTCGCTATGTTTATCACCTCGTGGATTGAAGACATTGATCCATCTAAGGTTTTTGAAAGTCACAGCATCTTCTACAAGAATTGGAAATGATGTTTTAGCTTCTGTATGCAACCTTTGGAATCTAGAAACGCTTTACTTATGGATTACAGAAGATATTACTCTACCAAGCAAAATATGGAAGCTCAAGTCACTCAGGCACCTGTATTTAAACTTTGCTGATATCATATTAAGAGGATTGAGTCAGAGAGTACCAATGCCGGGGATGGAAATGGTAGAAAGGGCGAATACATTACAAGTATGGTCTAGAGCAGCATCAATGTCAAGGATGAAAATCGGAGAAACAAAGGTGGAGAATCTTCAAACACTGAATAACATCTATCTTAATGCAAGAACAGCAAGCGTCCTAAACAAGGGCATGTTCCCCAACTTGACAAAATTAACTTTGCGTAGAGAGCTGACAGATCTGCCAGAGCCGCCAGAAAAAGAATTTTTAGGTAACAGTTTGCGGTGCCTAAACAAACTCCGAACTCTAAAGCTACTTCGCATCGCGAAGCTTCCATTAGATCCGAATGCGTATCCTACAAGTCTTACCAAGATTACCATAGCATACTTTGGTCTACTGCATGCAAGAATGATAAAGACCCTGGGACAGCTAGCCAACCTGCGAACCTTGAAACTCGTTGGCGGAAGCATAATTGGTGATGTTGATTGCGTAGCTGGTGACTTCCCACAGCTTCAAGTACTACATGTGAGTGACTCTTGCAGGTGGAAAAAAGAAGAAGGAGCAATGCCTCAGCTTCGATATTGCAACAACCCTCGCATCCATGACTAA 2499 0.4158 MVDSVDTIAWQNLSRLLANELISLPGVNDQTRSVREAVNHSRDMAYTAEDIVDTYAVNVNMHRSRNMLVKYFHSRNQVVNRKLIAMMSGVRELYEKTYKNNSIYGIHQGDFECYTRNKEFAKDSLIVKRRDVEEEEVVGMVRDSNEVISQLEGGDLSRGVVCILGMGGLGKTTLARKIYNNNKIKSMFPCCVWGFVSNYYSAQELLMSILKLLDLPEEEYKYLTNPEQMKRKVRESMSGKKYLVVLDDIWYTQVWDELHEAFPDDNNGSRILITIRMENISRYTNATFTYRLPFLDETQSWELFYNKVFCKARCPPELEPAGKEMAKACKGLPLAIVVFAGMVAKKEKSLREWDRIKNNVSWYHTREDYRIVTDILKLSYDSLPQILKPCFLYLGVYPEDYEIPARTLCQLWIAEGFIQAREATEAGPSNSQEVEDIAEMYLDNLVERSLVQVASKRSDEGVKTCRVHALLREICISESKENKFMEVCEELDANRCNSRRVSLQYKGECLPTTGDKWLARSLLFFGEETPWERESQGWKQIRNGFKLGRVLDMNQVSLCLSPRGLKTLIHLRFLKVTASSTRIGNDVLASVCNLWNLETLYLWITEDITLPSKIWKLKSLRHLYLNFADIILRGLSQRVPMPGMEMVERANTLQVWSRAASMSRMKIGETKVENLQTLNNIYLNARTASVLNKGMFPNLTKLTLRRELTDLPEPPEKEFLGNSLRCLNKLRTLKLLRIAKLPLDPNAYPTSLTKITIAYFGLLHARMIKTLGQLANLRTLKLVGGSIIGDVDCVAGDFPQLQVLHVSDSCRWKKEEGAMPQLRYCNNPRIHD 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03220 832 Pfam NB-ARC domain 145 381 IPR002182 GO:0043531
Adu04g03220 832 Gene3D - 386 477 IPR036388 -
Adu04g03220 832 PANTHER - 32 812 - -
Adu04g03220 832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 394 IPR027417 -
Adu04g03220 832 PRINTS Disease resistance protein signature 160 175 - -
Adu04g03220 832 PRINTS Disease resistance protein signature 236 250 - -
Adu04g03220 832 PRINTS Disease resistance protein signature 329 343 - -
Adu04g03220 832 PRINTS Disease resistance protein signature 725 741 - -
Adu04g03220 832 PANTHER DISEASE RESISTANCE PROTEIN RP 32 812 IPR044974 GO:0006952
Adu04g03220 832 Gene3D - 121 288 IPR027417 -
Adu04g03220 832 Gene3D - 294 384 IPR042197 -
Adu04g03220 832 SUPERFAMILY L domain-like 546 809 - -
Adu04g03220 832 Gene3D Ribonuclease Inhibitor 533 828 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03220 Adu-Chr4 120229940 120232438 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03220 161 474 WRKY Transcription Factor Family AT5G45050 24.062 2.90e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03220 - - aip:107635641 1128.62