Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03219 ATGACATTTGGGTTAGTGTACACAGTTTATGGCAAAGTAGTGAATCCAAAGAAAGGAAATATGGGGATTGTAGCCCCAATTGCAATTGGAGTCATTGTGGGTGCAAACATCTTAGTAGGTGGTGCATTTGATGGTGCATCAATGAATCCCGCACATTTGGACCTGCTGTTGTTAATTGGTCACGGACTCATCATCATTGGGTGTATTGGGTTGGCCCTTCATTGGTGCTACCATTGCTGCCATTATGAATGA 252 0.4325 MTFGLVYTVYGKVVNPKKGNMGIVAPIAIGVIVGANILVGGAFDGASMNPAHLDLLLLIGHGLIIIGCIGLALHWCYHCCHYE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03219 83 Pfam Major intrinsic protein 1 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu04g03219 83 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 51 - -
Adu04g03219 83 PANTHER AQUAPORIN-8 1 51 IPR034294 -
Adu04g03219 83 SUPERFAMILY Aquaporin-like 1 52 IPR023271 -
Adu04g03219 83 Gene3D Glycerol uptake facilitator protein. 1 81 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03219 Adu-Chr4 120229092 120229343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03219 1 77 Major Intrinsic Protein MIP AT4G01470 61.039 1.40e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03219 K09873 - pop:7468799 73.1738