Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03216 ATGATGGTTTCGAGAGGATTGTTCGGTTGGTCCCCGCCGCACGTGCAACCTCTGACGCCGGTTTCGGAGGTTTCGGAGCCGCCGGAGTCTCCGTCGCCGTACCTTGACCCGGGTGCCGAGACCTCCGCGTCGCAGCAGCAGGTGGAGGTCGATGAGGAGATTGAGGAGCCGGAGGAGGTCGAGCCTCCGCCGGCGGCGGTTCCTTTCTCGAGGCTCTTCGCCTGCGCTGACCGGTTCGACTGGTTCCTCATGGCTGCTGGTTCGGTCGCCGCCGCAGCTCACGGCGCCGCCCTCGTCGTTTACCTGCACTATTTCGCGAAGATCATACATGTGCAGGTGGAACCTAAGCACGAGCTGTTTCACAGGTTCAATGAGCTTGCTTTAACCATTGTTTATATTGCCGCGGGAGTTTTTGCAGCTGGTTGGATTGAGGTTTCTTGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTCATAAGGTCAAAATATGTTCAAGTGTTACTAAATCAAGATATGAGCTTTTTTGATACTTATGGAAATAATGGAGACATTGTAAGTCAAGTATTGAGTGATGTGCTGCTTATTCAGTCTGCCCTTAGTGAAAAAGTTGGAAATTATATTCACAATATGGCTACGTTCTTCAGTGGTCTTGTCATTGGACTCATAAATTGTTGGCAGATTGCTCTGATAACGTTAGCAACAGGTCCGTTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTCCACCGACTTGCAGAGAATATTCAAGATGCATATGCTGAAGCGGCTAGCATTGCCGAACAGGCAGTTTCGTATGTAAGGACATTGTATGCATTCACAAATGAAACATTGGCCAAGTATTCCTATGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTGCAACTCTGGGTTGGAAGGTTCTTGGTTATACATGGAAAAGCACATGGTGGTGAAATTATAACAGCCCTGTTTGCTGTAATTCTAAGTGGCTTGGGATTGAATCAAGCAGCAACCAACTTCTACTCTTTTGATCAGGGGAGAATTGCTGCTTATAGATTATTTGAGATGATAAGCCGGTCATCCTCATCTGATGATCATGACGGCATTACTCCTGATTCTGTGCAAGGAAATATAGAGTTTCGGAATGTTTATTTCAGCTATCTGTCTCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTTAGTGTACCTGCTAAGAAAGCTGTGGCTCTTGTTGGCAGAAATGGCTCTGGGAAAAGTAGTATTATTCCACTAATGGAGCGTTTCTATGATCCTACATTAGGGGAAGTTCTTCTAGATGGAGAAAACATCAAGAACTTGAAACTTGAATGGCTTAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTTAGTTTGAGTATAAGAGATAATATTGCTTATGGGAGGGATGCCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATCAGCTCATTGGAGAAAGGTTATTACACACAGGTTGGCAGGGCTGGTCTGGCTTTGACTGAAGAGCAAAAAATAAAACTTTCTATTGCTAGAGCTGTGCTTTTAAATCCATCGATTCTTCTACTTGATGAGGTTACTGGTGGTCTTGATTTTGAGGCTGAGAGGGCTGTTCAGGGGGCTTTGGACCTACTTATGTTGGGACGCTCAACAATAATAATTGCTCGACGGCTTAGTCTCATAAGGAATGCTGATTATATCGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAATTATTGTCCTTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAATTACAAGGAGACTGCAGTGTTTCAAATTGAGAAGGATTCTTCAGCAAGTCATAGCTTCAAAGAACCATCATCCCCTAAAATGTTGAAGTCACCTTCTCTTCAAAGAGTATCTAATGTATCCCGCCCTCCAGACGGAAGCTTTAACTTGCTTGAATCTCCAAAGGCCCGGAGCCCACCACCTGAGAAGATGGTGGAAAATGGTCAAGCTCTTGATGGAGCAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAGATGAGACTTCCAGAGTTACCTAAGCTTGATGTGCAGTCTCTGCATCGTCAAAAATCAAATGGTTCTGACCCAGAATCTCCTGTTTCTCCCCTTTTAACATCTGATCCCAAGAGTGAACGCTCTCATTCGCAGACTTTTAGTAGAACGCAGAGTTACTCTGATGATCTTTCGGCTGAAAAGAGAAAATTGAAGGATACAAGGCATCAAAAACCACCATCACTTAGGAAGCTTGCTGAGCTTAGCTTCGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATTTTTGGTTCTTTCAATCCTCTTCTTGCTTATGTGATTGGCCTTGTGGTGACAGCTTACTATAATATTGATAAAGATCATCACTTACGATGGGAGGTAAACAAGTGGTGTTTGGCCATTGGCTGCATGGGTATTGTGACAGTAATTGCCAACTTTTTACAGCATTTCTACTTTGGTATCATGGGGGAGAAAATGACAGAAAGGGTTAGGAGAATGATGTTCTCAGCCATGCTTCGGAATGAAGTTGGGTGGTTTGATGATGAGGAAAACAGTGCTGACAATTTATCCATGCGATTGGCCAATGATGCTACTTTTGTACGAGCTGCTTTTAGCAATAGGCTGTCTATATTTATTCAGGACAGTGCTGCAATTATTGTTGGTCTTCTAATTGGTGCCTTGCTGCACTGGCGGTTAGCACTTGTGGCTTTTGCAACCCTTCCAATTCTCTGTGTTGCTGCAATTGCCCAGAAGATGTGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCATAGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGAAACATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTAATGGAACTTTATAGGCTGCAGTTGAAGAAAATATTTAGGAAGAGCTTTCTTCATGGGATGGCAATCGGTTTTGCATTTGGCTTTTCACAGTTCCTACTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGGGAGATGTGTAAAAAATGGTTATGTGCAACTATCTACTGCACTCAAGGAGTATATGGTTTTCTCATTTGCGACATTTGCGCTTGTAGAGCCTTTTGGATTGGCTCCTTACATCCTTAAACGACGGAAGTCTCTCATATCAGTGTTTGATATCATAGATCGTGTGCCTAAAATTGATCCTGATGATAGCTCAGCATTGAAGCCACCCAATGTACATGGAAGAATTGAGTTAAAAAATGTTGATTTCTGTTACCCAACTCGTCCAGAAGTTTTGGTATTGAGCAATTTTAGTCTCAAAGTCAATGGTGGGCAAACGGTTGCTATTGTGGGAGTTTCTGGGTCAGGAAAGAGCACTATTATATCGTTGATTGAGAGGTTTTATGATCCAGTTTCTGGCCAAGTTTGGAACCTATTATCTTCTCAACAACCATAA 3657 0.4334 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQQVEVDEEIEEPEEVEPPPAAVPFSRLFACADRFDWFLMAAGSVAAAAHGAALVVYLHYFAKIIHVQVEPKHELFHRFNELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSDDHDGITPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLSVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLEKGYYTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLSLDGLYAELLRCEEAAKLPKRMPVRNYKETAVFQIEKDSSASHSFKEPSSPKMLKSPSLQRVSNVSRPPDGSFNLLESPKARSPPPEKMVENGQALDGADKEPSIRRQDSFEMRLPELPKLDVQSLHRQKSNGSDPESPVSPLLTSDPKSERSHSQTFSRTQSYSDDLSAEKRKLKDTRHQKPPSLRKLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYNIDKDHHLRWEVNKWCLAIGCMGIVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAIIVGLLIGALLHWRLALVAFATLPILCVAAIAQKMWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFRKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGRCVKNGYVQLSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDSSALKPPNVHGRIELKNVDFCYPTRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVSGQVWNLLSSQQP 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03216 1218 Gene3D ABC transporter type 1, transmembrane domain 62 384 IPR036640 GO:0005524|GO:0016021
Adu04g03216 1218 MobiDBLite consensus disorder prediction 792 808 - -
Adu04g03216 1218 SUPERFAMILY ABC transporter transmembrane region 71 383 IPR036640 GO:0005524|GO:0016021
Adu04g03216 1218 MobiDBLite consensus disorder prediction 664 729 - -
Adu04g03216 1218 Pfam ABC transporter 1168 1209 IPR003439 GO:0005524
Adu04g03216 1218 SMART AAA_5 430 609 IPR003593 -
Adu04g03216 1218 SUPERFAMILY ABC transporter transmembrane region 809 1135 IPR036640 GO:0005524|GO:0016021
Adu04g03216 1218 Pfam ABC transporter transmembrane region 832 1096 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu04g03216 1218 Pfam ABC transporter transmembrane region 88 353 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu04g03216 1218 Coils Coil 249 269 - -
Adu04g03216 1218 Gene3D - 1155 1212 IPR027417 -
Adu04g03216 1218 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 85 370 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu04g03216 1218 Gene3D ABC transporter type 1, transmembrane domain 786 1154 IPR036640 GO:0005524|GO:0016021
Adu04g03216 1218 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 827 1119 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu04g03216 1218 MobiDBLite consensus disorder prediction 751 791 - -
Adu04g03216 1218 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 638 IPR003439 GO:0005524
Adu04g03216 1218 MobiDBLite consensus disorder prediction 664 697 - -
Adu04g03216 1218 CDD ABC_6TM_Pgp_ABCB1_D2_like 822 1133 - -
Adu04g03216 1218 PANTHER ABC TRANSPORTER B FAMILY 19 1210 - -
Adu04g03216 1218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1139 1210 IPR027417 -
Adu04g03216 1218 Gene3D - 393 646 IPR027417 -
Adu04g03216 1218 MobiDBLite consensus disorder prediction 1 63 - -
Adu04g03216 1218 Pfam ABC transporter 424 568 IPR003439 GO:0005524
Adu04g03216 1218 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1210 - -
Adu04g03216 1218 MobiDBLite consensus disorder prediction 742 808 - -
Adu04g03216 1218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 637 IPR027417 -
Adu04g03216 1218 CDD ABC_6TM_Pgp_ABCB1_D1_like 116 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03216 Adu-Chr4 120207091 120214617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03216 54 695 Calmodulin-binding Proteins AT2G36910 44.393 4.65e-169 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03216 K05658 - gmx:100789116 2118.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03216 04 120207091 120214617 Adu04g03216 04 120207091 120214617 ECH