Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03213 ATGGTGGGAAACGACGATGCTGGTGACCGGAGAGTGTTTTGGAGGTCGGCGTCGTGGTCCTCCTCTCGCACCGGCACCGCTTCCAGCAATAACCCATCCGGTGAGGCGGATCCAAATTCCTGCGGCGGAGACACTGTCACCGGCCAGAATCGCAAGTTCTGTCCGCCGCCACTTACGCCGCGATCGCAGCAGAGTTCCAAGTCCCGGTCGAGCCTGCCGCCCCTCCAGCCGCTTTCGATAGCCCGGCGGAGCCTCGATGAGTGGCCGCAGGCGAGCTCTGATGACATTGGGGAGTGGTTGCCCCCGCAGCCGCCGTTGACCCCCGGTGGCGGCATGAGAGGTAACCCTGGTGAAAGGTTGAAACTTGATCTCTCCTCAATTCAGATGAACAATGATAGGAATTGCAATAATGGCAGTAATAGTAGTGGTAATAATAATAGTTGTAACAATAATGGTGTTAGTGGACTCTTGAAGAGGGATAGAATTGCATTTTTTGATAAGGAGTGTTCAAAGGTTGCTGAACATGTTTACCTTGGTGGTGATGCTGTTGCTAAGAATAGGGAAATATTGAAACAGAATGGGATCACTCATATTTTGAACTGTGTTGGTTTTGTGTGCCCCGAGTATTTTAAGGCTGATTTTGTGTATAGAACATTGTGGCTTCAGGATAGTCCTTCAGAGGATATTACTAGTATCTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAACAATGTGGTAGGGTGTTTGTGCACTGTTGTCAAGGTGTGTCTAGGTCTACTTCGTTGGTGATTGCATACCTCATGTGGAGGGAAGGACAGAGCTTTGATGATGCTTTTCAGTTGGTGAAGGCTGCGAGGGGTATTGCCGATCCGAATATGGGATTTGCTTGCCAGTTGTTGCAGTGCCAGAAGAGGGTGCATGCAGTTCCTCTTAGCCCTACCTCTTTGCTTAGGATGTATAGGATGGCTCCACACTCGCCTTATGATCCTTTGCATCTCGTCCCCAAAATGTTAACGGATCCTTCGCCTTCCGCATTGGACTCCAGGGGAGCCTTTTTTGTACATATTCCCACTGCAATATTTGTTTGGATTGGTATGAAGTGTGATTCCATCATGGAAAGGGATGCCAGAGGTGCTGTTGGTCAGATTATTCGCTATGAGAAAGCCGAAGGACCCGTTAAAGTGATTAGAGAAGCTCAGGAACCTGCTGACTTCTGGGAAGTTTTCTCAAGGTTCTTGCCTTTGATGGATAAATCTTACAGTAAAGTAGAGAGTTTCAAATCAAGTGCTAAGGTTCGGCCTGGTGAGAGGAAAGTGGGCTCCTATGATGTTGATTATGAAGTTTTCCAAAAAGCTATTGTTGGAGGTTTTGTGCCACCATTTCCATCATCAGAGGATGAACATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTGCTTTAAGGCGTAAAGTTTCCTCTTCTCATATGAAGGAGATTGTCACAGCCCCTAAGTCATCCCTCCCAAGGGTTTATTCCGATTCCATGTTGTGTATTCATTCAACAAAAACTTCATCTCCATCCTCATCATCTATATCATCATCTTCGCCCTCGTATATCTCTCCAGATTCAGTTTCTTCTGATTCCAATTCTCATTTGAAGTTCTTGTCAGAGGTTTCCCCAGATAACTCTGCAGTTTTGACTGCCAATCCAGTGTCTTCATCTTTGTCCAAGTTTTCTAATTTGACCCTGTTGCAAAGTTCTACTTCCCAACCAGTATCTAATAGTGCCGATATCTGTGATATCAAGTTGTCACATCCTCATTCTCACCCAGCCCCGTTGCCTTTGAAAAAACCATCATCTTCCTTGGCCGAACGCAGGGGTAGTTTGTCAAAGTCTTTGCAGTTGCCTCTAATGAATGATAAAACAGAGGTAACAGATAAACCATTGCCTTTGCATGCTAATCGACAAGATGGGGTTCTTGAGAATGGCAACCTAAGCTGTTCGCAACCATCAGATAGTACATATAACTCTTGTGGAACTAACAATCGTGTCGAGGACACAGGCGCTAATTCAATTAATGTGGACTACAAGGATTCTTTGCCCGTTAGAAAGTCTAGTGAGTTGTCAATATATGGTTCCTCAAGTGGATACTTGAAGCCTACATCATCAGATTCACTTCATAATGGGGATGGCTCATTGCAGGGCAAGATATCCCAAACTCTAGTATACCACTGGCCCAATTTAGAAAAGATCGAGACTTTTGGTGCAAGTCATCTGGAATCTAAAGCTGCTTTTGTTGTGTTCTCTCCAACTTTTGATGTCAACGAGGGAAACATTTTATATTTTTGGATAGGGAGGTCTTTCAGTTGCGATGCTTCACGGGTTCAGTTAATCAGAGGTATAGAGTCAGATTTTGTAGGAGAATTTGACTGGAATCGAATTGGTTGTGATGTTCTTACACGGTTAAGTTTGCCGAAGAATACTATTGTCAAGGTTGTTAGACAGAATGAAGAACCACGAGAGTTCCACTCTTTGCTGAGTTCATTGTAG 2541 0.4494 MVGNDDAGDRRVFWRSASWSSSRTGTASSNNPSGEADPNSCGGDTVTGQNRKFCPPPLTPRSQQSSKSRSSLPPLQPLSIARRSLDEWPQASSDDIGEWLPPQPPLTPGGGMRGNPGERLKLDLSSIQMNNDRNCNNGSNSSGNNNSCNNNGVSGLLKRDRIAFFDKECSKVAEHVYLGGDAVAKNREILKQNGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQCGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQLVKAARGIADPNMGFACQLLQCQKRVHAVPLSPTSLLRMYRMAPHSPYDPLHLVPKMLTDPSPSALDSRGAFFVHIPTAIFVWIGMKCDSIMERDARGAVGQIIRYEKAEGPVKVIREAQEPADFWEVFSRFLPLMDKSYSKVESFKSSAKVRPGERKVGSYDVDYEVFQKAIVGGFVPPFPSSEDEHETHLPARESSWSALRRKVSSSHMKEIVTAPKSSLPRVYSDSMLCIHSTKTSSPSSSSISSSSPSYISPDSVSSDSNSHLKFLSEVSPDNSAVLTANPVSSSLSKFSNLTLLQSSTSQPVSNSADICDIKLSHPHSHPAPLPLKKPSSSLAERRGSLSKSLQLPLMNDKTEVTDKPLPLHANRQDGVLENGNLSCSQPSDSTYNSCGTNNRVEDTGANSINVDYKDSLPVRKSSELSIYGSSSGYLKPTSSDSLHNGDGSLQGKISQTLVYHWPNLEKIETFGASHLESKAAFVVFSPTFDVNEGNILYFWIGRSFSCDASRVQLIRGIESDFVGEFDWNRIGCDVLTRLSLPKNTIVKVVRQNEEPREFHSLLSSL 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03213 846 PANTHER MKPA PROTEIN 1 839 - -
Adu04g03213 846 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 227 288 IPR000387 GO:0016311|GO:0016791
Adu04g03213 846 MobiDBLite consensus disorder prediction 600 685 - -
Adu04g03213 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 309 IPR029021 -
Adu04g03213 846 MobiDBLite consensus disorder prediction 56 75 - -
Adu04g03213 846 Pfam Dual specificity phosphatase, catalytic domain 176 306 IPR000340 GO:0008138|GO:0016311
Adu04g03213 846 MobiDBLite consensus disorder prediction 519 539 - -
Adu04g03213 846 Gene3D Severin 320 415 IPR029006 -
Adu04g03213 846 SUPERFAMILY Actin depolymerizing proteins 316 425 - -
Adu04g03213 846 CDD DSP 169 303 - -
Adu04g03213 846 MobiDBLite consensus disorder prediction 656 685 - -
Adu04g03213 846 SUPERFAMILY Actin depolymerizing proteins 746 844 - -
Adu04g03213 846 MobiDBLite consensus disorder prediction 620 636 - -
Adu04g03213 846 MobiDBLite consensus disorder prediction 1 75 - -
Adu04g03213 846 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 839 - -
Adu04g03213 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 252 262 IPR016130 GO:0016311|GO:0016791
Adu04g03213 846 MobiDBLite consensus disorder prediction 87 119 - -
Adu04g03213 846 ProSiteProfiles Dual specificity protein phosphatase domain profile. 168 310 IPR020422 GO:0006470|GO:0008138
Adu04g03213 846 MobiDBLite consensus disorder prediction 15 47 - -
Adu04g03213 846 Gene3D Protein tyrosine phosphatase superfamily 144 310 IPR029021 -
Adu04g03213 846 SMART dsp_5 168 307 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03213 Adu-Chr4 120194573 120198656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03213 2 204 Protein tyrosine phosphatase (PTP) family AT3G55270 53.883 2.09e-55 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03213 - - gmx:100790177 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03213 04 120194573 120198656 Adu04g03213 04 120194573 120198656 ECH