Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03190 ATGGCCGATGATGGAAAAGCTGGCGCATCCTCGTCGTCTTTGTCGCCGGCCCCGTGGTTGTGGGCGACGTCATCCTCATCAGAAGGAGGCATGTACGATGTTTTTCTGAACTTTAGAGGCGAGGACACAAGGTTCTTATTCACAGATTATCTCTATCATGGACTGGCCGATGTAAAAAAACTGGAAGTGTTCAGGGATGATCCGGGTCTGGAACTAGGTGACGAAATTAAACCTACTCTGATGGAAGCCATTAAAAGATCTAGGATTCATATTGTTGTGATGAGTGAAAACTATGTATCTTCCTCATGGTGCCTCCTGGAACTAGAACAGATGCTCAAGTACTCCAACAATGGAACAAAACGCCCGGTTTTCCCAGTTTTTTATCACGTGACGCCCGCAGAAGTGAGATATCAGATTAACACCAAATCTAAGGAAGCCATGGAGAAACATGAAAAGAGAGAAGGCAAAGACAAGGCGGAAGCGTGGAAGTTGGCTTTATCTACCGTTTGCGGGCTAAGCGGACAACACATTCAAGAGAAGCATCAAGAGAAGTATGAAACCGAGGTCATTGGCAAGATTGCTGAACAAGTCTCTGCAAAACTTCTAGAGATCAAGCAACAATTAAATAGATTTGATTCTCAATTTGAAGTGGTCGAATCACTTTTGAACCTTGAATCTTGTGACACTGTACGTGTGGTGGGAATTTATGAAGATCAAGGAGGAAAAAGTTACATAACAACATTTGCATTTGAGCTATACTATAAGATCAAAGATGAGTTCAGAGCGGCAAGTTTTGTTGTTGATGTTGGCAAACATTTAATGAGAAACACCGCTGATGATGGCTTGGAATATCTTAAAAAGGAGCTTCTTTCCGATATGGTTGTAGAGACCAAGCAGGAGTTGCAGCATaaaagagtgcttctggttctggaaggggttgatagtgaagagcagttggagttgctagagggaatgagaatagttgattggtttggtcctggtagtaggatcatcataacaacagaaaacaaagatctCTTTCAGAATTATTCTCCTGTAATGAATGGTGTTGAGCTTGAGACACATTGCATTCGTGAAGGTGAAATGGTTGGCAGCAATTGGATAGTGAAGGAAAAGCATGTAGTGGGATTTGTAAAAGATTTCATCGATGTAATTAATCAATTGAGGGAAGAAGATTCAAAGAGGAGGAATGTTGTTTCCATTGTTGGTATGGGTGGGTCAGGAAAGACTACTCTTGCCCAAAAGATCTATGATAGCAAAGTGGTGAGGGAGGTATTCCCTTTGCGTGCTTGGGCAACTGTTTCCAAAGATTACAGAGAAAAGGAAGTTTTCTCAAGCCTTTTTCGTTGTCTAATGCCATCTAAGCCTATACCTGAAAACGAACAAGAGTTGAAGTCCAAGGTGAGAAGATGTTTGAATGAGAAAAGGAGAAAGTACTTGGTAATACTCGATGATGTGTGGGACATTCAAGTGTGGGACAAGCTGAAGGATTATGTTCTCCCAAATAAGAACAATGGGAGCAGGATATTGGTGACTACACGAAATGATCAGGTGGCAAACTATGCAAGGTCAAAGGAGCCCCACCACAAACTTCTCCTCTTGAATGAAGAAGAATGTTGGGAATTGATTTACAACGAGGTGTTTGGTGGAGAAGAGTGTCCTCCTGATTTAGAGCCTATTGGTAAATCAATTGCTGATGGTTGCAAGGGTTTACCATTGGCTATCAAAACTACAGCCGGGATTGTAGCAAAGAGGGAGAGATCAGAGGATGAATGGAAAAAAATCAAGAATCTGCTCCCTCATTGGTGTGTTGCTGAAGACAAGGAAGGTAAGAAGATGATGGAGATATTGAAGCTTAGCTATGATGATCTGTCTGAGAAAATGAAGCCATGCTTCTTATATCTTGGGGTGTTTCCTGAAGATGTAGAGATTCGGGTGAGAGACTTAATCGAAGTATGGATAGCAGAAAGGTTGATAGAGCCAATCCAGAGTGGAAGATCAAAAGTAGCACCAGAACCTGATGATATTGGTGAGCAATACTTGAAGGAACTAGTGGATCGTAACTTGGTACAAGTGGCCAGTAGGAGGAGTGACGGGAAAGGCGTCAAAACGTGTAAGATCCATGATCTCATTCGGGAGTTGTGTATTTCAGAGAGTAACAGTAACAATGCTCGTAGGTTGTCCTTTCCAAGGGATATAGGATCCTATGCATGTTCAGTAACATGTCATCAATCATGCACTTATTCCTTGTTCATTTATGGAGATGCCAAGGGGTGGTCACATCATATTCCACAAGACTGTCGAGTTAATGTGCTATATATTATGGGATGGATTGTTGATCTAACTAGTGAAAAGAATGTTGAGAATTTGAAGGAGTTGAAAAGTGTCAAGTTCTTGAAAATAGATCGTTTTTACCCAAATGGGCTAAGTAAGCTTGAGAGCATACAAACATTACATATAATGGGCGATGTAACTCCCAGGGACCTAAGTATTATTGAGGGGTTAAAGCAACTGAGACATTTTCGAGGAGTTGAAGTGTGTTTATTAGTAGATAAAGATGGGGTAAAAAACAAAATGCACAATCTCCAAACCCTACTTTATGTGCATGTTGATTCACGACTAGGGTTCTTACTCAACAATGACTACTTTCCCAACTTAAGAACACTAGGTGTATCTGTAACTGAAGAAGAAAGACATTCAGCAGAAAAAACTTTTAGTAGTTTACACTGCCTAAGCAATCTACAGAAACTGAAATTGGAGCTCCCGATCTCTGAATCATTTCCAATTCCAGTTGATAAAATTGCATTTCCGTCAAATCTTAGCAAGCTTACCATCTCATATTTTGATGGTTTGAAGTCCCAAGACATGAATGCATTGGCACAAATTCCCGGCCTTAAGATTTTAAAATTCAATGATGTTAGTTGTATCGAAAAAATCCTTAATTGTGGTACTGATAGGAGCTTTCTGCAGCTTCAAGTGTTTATCATGATACGTGTGCGTGTCAAATGTCTTACCTTAAAAGATGGTGCGATGCCTTGCCTTCGCCGTGCGGTCTTCCATGACTGCCCTGGCTTGGAGTTGAAGGACCTTCCTCAACAAATGCGTTCCTTGGGTTGTAACTTGCATTTTACGCCACATGATGATGTCGATGAATTGATGATGATTGAGTTCTCTAAGGCATTCAGGCATTAG 3213 0.3946 MADDGKAGASSSSLSPAPWLWATSSSSEGGMYDVFLNFRGEDTRFLFTDYLYHGLADVKKLEVFRDDPGLELGDEIKPTLMEAIKRSRIHIVVMSENYVSSSWCLLELEQMLKYSNNGTKRPVFPVFYHVTPAEVRYQINTKSKEAMEKHEKREGKDKAEAWKLALSTVCGLSGQHIQEKHQEKYETEVIGKIAEQVSAKLLEIKQQLNRFDSQFEVVESLLNLESCDTVRVVGIYEDQGGKSYITTFAFELYYKIKDEFRAASFVVDVGKHLMRNTADDGLEYLKKELLSDMVVETKQELQHKRVLLVLEGVDSEEQLELLEGMRIVDWFGPGSRIIITTENKDLFQNYSPVMNGVELETHCIREGEMVGSNWIVKEKHVVGFVKDFIDVINQLREEDSKRRNVVSIVGMGGSGKTTLAQKIYDSKVVREVFPLRAWATVSKDYREKEVFSSLFRCLMPSKPIPENEQELKSKVRRCLNEKRRKYLVILDDVWDIQVWDKLKDYVLPNKNNGSRILVTTRNDQVANYARSKEPHHKLLLLNEEECWELIYNEVFGGEECPPDLEPIGKSIADGCKGLPLAIKTTAGIVAKRERSEDEWKKIKNLLPHWCVAEDKEGKKMMEILKLSYDDLSEKMKPCFLYLGVFPEDVEIRVRDLIEVWIAERLIEPIQSGRSKVAPEPDDIGEQYLKELVDRNLVQVASRRSDGKGVKTCKIHDLIRELCISESNSNNARRLSFPRDIGSYACSVTCHQSCTYSLFIYGDAKGWSHHIPQDCRVNVLYIMGWIVDLTSEKNVENLKELKSVKFLKIDRFYPNGLSKLESIQTLHIMGDVTPRDLSIIEGLKQLRHFRGVEVCLLVDKDGVKNKMHNLQTLLYVHVDSRLGFLLNNDYFPNLRTLGVSVTEEERHSAEKTFSSLHCLSNLQKLKLELPISESFPIPVDKIAFPSNLSKLTISYFDGLKSQDMNALAQIPGLKILKFNDVSCIEKILNCGTDRSFLQLQVFIMIRVRVKCLTLKDGAMPCLRRAVFHDCPGLELKDLPQQMRSLGCNLHFTPHDDVDELMMIEFSKAFRH 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03190 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 642 IPR027417 -
Adu04g03190 1070 Coils Coil 194 214 - -
Adu04g03190 1070 SMART till_3 31 172 IPR000157 GO:0007165
Adu04g03190 1070 ProSiteProfiles TIR domain profile. 30 201 IPR000157 GO:0007165
Adu04g03190 1070 PANTHER - 362 1040 - -
Adu04g03190 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 354 IPR027417 -
Adu04g03190 1070 PANTHER DISEASE RESISTANCE PROTEIN RP 362 1040 IPR044974 GO:0006952
Adu04g03190 1070 SUPERFAMILY L domain-like 714 1039 - -
Adu04g03190 1070 Gene3D - 202 355 IPR027417 -
Adu04g03190 1070 Gene3D - 369 535 IPR027417 -
Adu04g03190 1070 PRINTS Disease resistance protein signature 480 494 - -
Adu04g03190 1070 PRINTS Disease resistance protein signature 405 420 - -
Adu04g03190 1070 PRINTS Disease resistance protein signature 575 589 - -
Adu04g03190 1070 Pfam TIR domain 32 210 IPR000157 GO:0007165
Adu04g03190 1070 Gene3D Ribonuclease Inhibitor 759 1058 IPR032675 -
Adu04g03190 1070 Gene3D - 24 201 IPR035897 -
Adu04g03190 1070 Pfam NB-ARC domain 390 630 IPR002182 GO:0043531
Adu04g03190 1070 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 174 IPR035897 -
Adu04g03190 1070 Gene3D - 633 723 IPR036388 -
Adu04g03190 1070 Gene3D - 540 632 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03190 Adu-Chr4 119992718 119997687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03190 81 347 WRKY Transcription Factor Family AT4G12020 28.571 1.01e-17 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03190 - - aip:110271380 1273.46