Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03185 ATGGCAGGTTCATCATCAGATCACGATGCGACACCATTGTCATATTTCAAGTATGATGTTTTCCTGAGTTTTAGAAGCTACACAAGGCTCAGATTCACAGACGCACTCTATCATGCTTTGGTCAACAAAAGAATCGAGACTTTCAGAGATAGAGAGAATCTGAGAACAGGCGAGGAACTCGAAGGTGCTCTTGTTGAAGCAATTGAAAGATCAAGGATGTCAGTTCTTATGTTGTGTGATGAGTATCCAACTTCCAAGTGGTGCCTTGATGAACTCGTCAAGATCATGGAGTGTTCGGAGCACGGAACAAAGCGACCGGTGTTACCAGTTTATTACTATGTGGAAAAATCAGATGTGCAGTTCCAGCTCAATGAATATGCAAAAGCCATGACTAATCATCAAGAAAAAGGCAGATACAATCACAAGTTGGAAGCATGGAGGTCAGCCTTGTCTCAAGTTGGCAAGATTTATGGTCCACTCTGTAATCAGAATACACCTTGGGGTGTGGTTATTGACAACATTGTTGAAGAGGTCTCAAGGAGACTTCCTTCTATTCCTTTATATATTGATCGCCCACTTGGATTAGATTCTCAGCTTGAAGAGGCGAAATCACTTCTAGAGGTTGATTCTCATGCTGCCTGTTTCATGCTGGGAATTCATGGAGATGGTGAACTAAGAAAATTTGTTTTGGAGCTATATAATGAGATTAGAGGTCATTTTAAAGCTGGAAGTTTTCTTTCTAATGTTAGTGAAAAAACAAAAAGAGGTGGCTTAGAAGGTCTGCAAAAAACGCTTTTGTCTGAAATGGGAGAGGAAGTGAAGACTGAGATAGGAAGCATATCCAGAGGATCCTCTGAAATTAGACAAAGGCTTGGcaaaaagagagttcttctagttttggatgatgttgatagcatacaaccattggaatcattagcaggggcaggtgattggtttggtcctggtagtaggatcattacaacaacaagaaatgaaggtgtgctagaTAAGCATGCATTAAAAAAAGGTGTTGAGATTAAGAAATTTTGCTTCGATGAAGGTGAATTCGAAGGCATGGAATCAGATGACAAACAAAAGAGGTATGTTGTGGAAGAAGATGTAGTAGGTTTTGAGGATGACATTGCCATTTTAATTAAGAAGTTGCAGGGGGATTCACACAATAATGTTGTCTCCATCATTGGTATGGGTGGGTTGGGCAAGACTACTCTTGCTCGAAAGATCTACAGCAGCAAAGAGGTCAAGAAATTGTTCCCTTATTGCGCATGGAGTTATGTTTCCAAAGACTACAACAAAAAGGAAGTTTTGTTGAGAATTCTTGATTTCTTGATGAGTTCAACATCTAAATTTAAAGATTCAAGTGAGGAGGTTTTGAAGAATGAAGTGGGAAAGTGTTTGAAATGGAGCAAATACCTTGTGGTGCTTGATGATATCTGGGAACCTGAAGCATGGGACGATTTGAGGGATACCTTTCCAAATGATAAAAATGGCAGCAAAATACTAATAACAAGTCGTAATGAAATGGTGGCAAACTATACAAATCCAAAGTGTCCTTCAAATCTAGATCCCCTTGGTAGATCAATTGTCGAAAGTTGTAGGGGTCTACCACTTGCTATCATCACCTTAGCAGGGCTTGTTGCCAAGAGAAAAAGGACAGAACAAGAGTGGTTGAGAATTAAGGGCTATGTCAGTTGGCATCTTGCTCAAGACAAGACCAAAGTCATGGATGTACTAAAACTTAGCTACGACTATTTGCCTAGAAGATTGAAGCCATGTTTTCTGTACCTTGGAATCTACCCTGAAGATTATGAGATCCCTGCGAAAGAACTTATCCAGTTATGGATAGCTGAAGGGTTCATACAACCACATGAAAGTGGAACTCCAAATGCACCAGAACCAGAAGATGTCGGTGAAGATTACTTGGGTGAGTTGGTAGATCGTAGCTTGATACAAGTAACCAGTACAAGGAGCTATGGAGGTGTGAAAACATGTAAGGTTCATGATCTCCTCCGTGAACTCTGCATATTAGAAAGCAAAGCTAATAACTCCTTAGAGGTTTTCACAGAGTCTAACATCCATGCCAACAACACAAGCAATCCTCATAGATTGTCTTTTCTGTGCAATGCACAATCTTATGTCTCCTCAGTCAAACCGGACACTCGTTCGTTGTTCTTTTTTGCCGGAGCCGGAAGGACGAACTGCAAAGAAAGTTGTCTTAAAAATTTCCAGTCTATACAAGTGCTACACTTGCAAGATCAAGTGTATTTCACATTAGATTCTAATGATCTGGAAACAATGATCCACTTAAAGTACTTGAGACTAAAGCGTCCGGCTAATAGAAAGGTATACGTTCCATATTATATCTGGAACCTTCCAAAGTTAGAAACACTGGATTTGGAGGTTTGGGCGCCATTCACTATCCTCGATGGATTTTGGAAGCTTGATCGACTGAGACATGTTTATGTGAGATGCAGCACAAAGCTACCTCCAGCAGCGCCACAAGCACCAACAATATTGTGGAACCTCCAAACCCTCTATGGAGTGGCTCTTGATCAAACAATAGCATCTCTGTTCAGCAACAACATCTTTCCCAACTTGAGAAAACTGGCCTTGCAGTACGGTTCACGTAAAGATGAAACAGATTCTCTGTTCTCAAGCCTCAAGTACCTAAGCAAGCTCCGTAGGCTAAAACTCCTCTGCAATGATTTTTGCCTATCATCAGAAGCAATAACCGCTTTCCCGCCAAATCTTATCAAGATTACCATGTCGGGATGTGGGGAGTTGGATTCGAGAGCGATGCACAGTTTGGGGCAACTAGCCAACCTGCAAAGTTTAAGCATATTTTCAGGGTCTTATGAGGTCCCTCTCTCGTGCGTGGGCGGAGGTTTCTCACGACTTCAAGTGCTGAAACTCGGATACTCATCTGGATACAACCGGGGTGTGTTGGACGGAGGTGAAATAATGCCTCCTCTTCGGTGTTTGGTGATGAAGCAGTGTCTTCGAGTGACTGCGCTTCCTGAACAGCTCTGGTCCTTAACTACCTTACAAAAGGTGGATGTTGTTGGCCCCTCCGACGAATTGGAAAAAATCCTCCGAAATGTTAACCTCAAGAAGGGTTGCAAGCTCACTGTAAACGGATATACAGATCTGGATGACCTACCTCTCCGTCGTCGTCGTCAGGCTACACAAGGCTCAGATTCACAGACAGTACTCTATCATGCTTTGGTCAACAAAAGAATCGAAACTTTCAGAGATAGCGAGAAGCTCAGAATAGGCCAGGAACTCGAAGGTGCTCTTGTTGAAGCAATTGAAAGATCAAGGATGTCAATTCTTATACTGTGTGATGAGTATCCAACCTCCAAGTGGTGCCTTGATGAACTCGTCAAGATCATGGAGTGTTCCCACAACGGAACAAAGCGACCAGTGTTACCAGTTTATTACTATGTGACAAAATCAGATGTGCGGTACCAACTCAATGAATATGCAAAAGCCATGACTGATCATCAAAACAAAGGCAGATACAATCACAAGCTGAAAGCATGGAGGTCAGCCTTGTCCGAAGTAGGCAAGAGTTATGGTCAACGCTGTAATCAGAATACACCATGGGGTATGGCTCTTGACAACATTGTTGAAGAGGTCACAAAAAGACTTCCTCCGATGCCTTTGTGTATTGACCGTCCACTTGGATGTGATTCTGAACTTGAAGAGGCAAAATCACTTCTACAGATTGATTCTCGTGCTACCTGTTTGATGCTGGGAATTCATGGAGATGGTGAACTAAGCAAATTTGTTGCGGAGCTGTATAACAAGATTAGGCCTCACTTTGTAACTGCAAGTTTTCTTTCCAATATCAGTGAGAAAACAAATGAAAGTGGTGGTGGCCTAGAACATCTTCAAGAAACGCTTCTTTCTGAGATGGGAGAGGAAATAAAGACCAAGATCGGAAGCACATTCAAAGGATCCTCTGAGATAAAACAAAGACTAGGCcagaaaagagttcttctagttttggatgatgttgataatatacaactgaaatcactagctggaggaattgattggttcggtcctggtagcagaatcattataacaacaagatatgaagatgtgctagaTGAGCATGTTTTAAATAATGGTATTGAGGTTAAGAAATATTGCTATGATGAAGGTGAATTCGATGGCAACAAAGGAAGTTATTCTATGATGGAAGAAAATATAGTCGGATTACAGAAAGACTTTGATGAGGTAATTAATCAACTGAAGGAAGAAGATTCTCCAAGGAATGTTGTTTCCATTGTTGGCATGGGTGCGTTGGGAAAGACTACCCTTGCTCGAAAGATCTATAACAGCAAAGAGGTCAGGAAGCTATTCCCTTGCCGTGCATGGACAACTATTTCAAAAGAATACATGGAAAAAGAAGTTTTTAGAAACCTTCTCAACTCTTTGACTTTACAAAAATCTAAATATAAAAATTCAAGTGAAGAGGAATTGAAGGAGAAGGTGAGGAAATGTTTGAATGGGAAGAAGTATTTGGTAGTGCTTGATGATGTTTGGGAAACAGAAGCGTGGGACAAGTTAAAGGATTATTTACCAGATAACAAGAATGGAAGCATGATACTGATAACTACACGTAAAAATCATGTGGCGTATTATGCAAGGTCAAAGGATCCTCACCACCAACAAAACTTCTTGGATAAAGATCAAAGCTGGGAAATGTTTTGCAACAAGGTGtga 4752 0.3902 MAGSSSDHDATPLSYFKYDVFLSFRSYTRLRFTDALYHALVNKRIETFRDRENLRTGEELEGALVEAIERSRMSVLMLCDEYPTSKWCLDELVKIMECSEHGTKRPVLPVYYYVEKSDVQFQLNEYAKAMTNHQEKGRYNHKLEAWRSALSQVGKIYGPLCNQNTPWGVVIDNIVEEVSRRLPSIPLYIDRPLGLDSQLEEAKSLLEVDSHAACFMLGIHGDGELRKFVLELYNEIRGHFKAGSFLSNVSEKTKRGGLEGLQKTLLSEMGEEVKTEIGSISRGSSEIRQRLGKKRVLLVLDDVDSIQPLESLAGAGDWFGPGSRIITTTRNEGVLDKHALKKGVEIKKFCFDEGEFEGMESDDKQKRYVVEEDVVGFEDDIAILIKKLQGDSHNNVVSIIGMGGLGKTTLARKIYSSKEVKKLFPYCAWSYVSKDYNKKEVLLRILDFLMSSTSKFKDSSEEVLKNEVGKCLKWSKYLVVLDDIWEPEAWDDLRDTFPNDKNGSKILITSRNEMVANYTNPKCPSNLDPLGRSIVESCRGLPLAIITLAGLVAKRKRTEQEWLRIKGYVSWHLAQDKTKVMDVLKLSYDYLPRRLKPCFLYLGIYPEDYEIPAKELIQLWIAEGFIQPHESGTPNAPEPEDVGEDYLGELVDRSLIQVTSTRSYGGVKTCKVHDLLRELCILESKANNSLEVFTESNIHANNTSNPHRLSFLCNAQSYVSSVKPDTRSLFFFAGAGRTNCKESCLKNFQSIQVLHLQDQVYFTLDSNDLETMIHLKYLRLKRPANRKVYVPYYIWNLPKLETLDLEVWAPFTILDGFWKLDRLRHVYVRCSTKLPPAAPQAPTILWNLQTLYGVALDQTIASLFSNNIFPNLRKLALQYGSRKDETDSLFSSLKYLSKLRRLKLLCNDFCLSSEAITAFPPNLIKITMSGCGELDSRAMHSLGQLANLQSLSIFSGSYEVPLSCVGGGFSRLQVLKLGYSSGYNRGVLDGGEIMPPLRCLVMKQCLRVTALPEQLWSLTTLQKVDVVGPSDELEKILRNVNLKKGCKLTVNGYTDLDDLPLRRRRQATQGSDSQTVLYHALVNKRIETFRDSEKLRIGQELEGALVEAIERSRMSILILCDEYPTSKWCLDELVKIMECSHNGTKRPVLPVYYYVTKSDVRYQLNEYAKAMTDHQNKGRYNHKLKAWRSALSEVGKSYGQRCNQNTPWGMALDNIVEEVTKRLPPMPLCIDRPLGCDSELEEAKSLLQIDSRATCLMLGIHGDGELSKFVAELYNKIRPHFVTASFLSNISEKTNESGGGLEHLQETLLSEMGEEIKTKIGSTFKGSSEIKQRLGQKRVLLVLDDVDNIQLKSLAGGIDWFGPGSRIIITTRYEDVLDEHVLNNGIEVKKYCYDEGEFDGNKGSYSMMEENIVGLQKDFDEVINQLKEEDSPRNVVSIVGMGALGKTTLARKIYNSKEVRKLFPCRAWTTISKEYMEKEVFRNLLNSLTLQKSKYKNSSEEELKEKVRKCLNGKKYLVVLDDVWETEAWDKLKDYLPDNKNGSMILITTRKNHVAYYARSKDPHHQQNFLDKDQSWEMFCNKV 1583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03185 1583 PANTHER - 366 1050 - -
Adu04g03185 1583 PANTHER - 1410 1582 - -
Adu04g03185 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 349 IPR027417 -
Adu04g03185 1583 Pfam TIR domain 17 181 IPR000157 GO:0007165
Adu04g03185 1583 Pfam TIR domain 1076 1203 IPR000157 GO:0007165
Adu04g03185 1583 Gene3D - 14 181 IPR035897 -
Adu04g03185 1583 ProSiteProfiles TIR domain profile. 1054 1223 IPR000157 GO:0007165
Adu04g03185 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 602 IPR027417 -
Adu04g03185 1583 Gene3D - 582 682 IPR036388 -
Adu04g03185 1583 SUPERFAMILY Toll/Interleukin receptor TIR domain 1075 1199 IPR035897 -
Adu04g03185 1583 Pfam NB-ARC domain 525 589 IPR002182 GO:0043531
Adu04g03185 1583 Pfam NB-ARC domain 1416 1583 IPR002182 GO:0043531
Adu04g03185 1583 Pfam NB-ARC domain 1302 1382 IPR002182 GO:0043531
Adu04g03185 1583 Pfam NB-ARC domain 209 347 IPR002182 GO:0043531
Adu04g03185 1583 Pfam NB-ARC domain 379 520 IPR002182 GO:0043531
Adu04g03185 1583 Gene3D - 1066 1221 IPR035897 -
Adu04g03185 1583 SUPERFAMILY L domain-like 673 1028 - -
Adu04g03185 1583 Gene3D - 1222 1384 IPR027417 -
Adu04g03185 1583 Gene3D - 1401 1562 IPR027417 -
Adu04g03185 1583 Gene3D - 364 522 IPR027417 -
Adu04g03185 1583 Gene3D - 182 344 IPR027417 -
Adu04g03185 1583 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 158 IPR035897 -
Adu04g03185 1583 ProSiteProfiles TIR domain profile. 16 164 IPR000157 GO:0007165
Adu04g03185 1583 SMART till_3 1055 1197 IPR000157 GO:0007165
Adu04g03185 1583 SMART till_3 17 156 IPR000157 GO:0007165
Adu04g03185 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1405 1582 IPR027417 -
Adu04g03185 1583 Gene3D Ribonuclease Inhibitor 726 1065 IPR032675 -
Adu04g03185 1583 PANTHER DISEASE RESISTANCE PROTEIN RP 366 1050 IPR044974 GO:0006952
Adu04g03185 1583 PANTHER DISEASE RESISTANCE PROTEIN RP 1410 1582 IPR044974 GO:0006952
Adu04g03185 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1394 IPR027417 -
Adu04g03185 1583 PRINTS Disease resistance protein signature 290 304 - -
Adu04g03185 1583 PRINTS Disease resistance protein signature 538 552 - -
Adu04g03185 1583 PRINTS Disease resistance protein signature 216 231 - -
Adu04g03185 1583 PRINTS Disease resistance protein signature 795 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03185 Adu-Chr4 119887362 119894446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03185 65 335 WRKY Transcription Factor Family AT4G12020 27.372 1.77e-17 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03185 - - adu:107486176 1781.15