Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03177 ATGGCTAGGTCGTTCCTCCAAGTGGCTGCTACCGAGGAGGCTGCTCCGCCTCTCAGAGTCGTCCAGATGGAAGGGCTGGTTATCCTGAAGATAATTAAGCATTGTAAGGACCACTCACCTTCTCTAGTCACTGGACAGCTTCTTGGGCTGGATGTTGGCAGTGTTCTTGAAGTTACTAACTGCTTTCCCTTTCCGATGAGGGAGGAGGATGAAGAAATTGAAGCTGATGGTGCAAATTACCAGCTTGAGATGATGAGGTGCCTGAGGGAGGTGAATGTTGACAACAATACCGTTGGATGGTACCAATCTACATTGCTTGGCTCATTTCAGACTGTGGAACTGATTGAAACCTTCATGAATTACCAGGAGAATATTAGACGCTGTGTTTGCATAATATATGATCCATCAAGGGCTGATCAAGGTGTCCTAGCCCTTAAGGCCTTGAAGCTTTCTGATGCATTCATGGAACTCTATCGCAGCAACAATTTCACTGGAGAAAAGTTGAGGGAGAAGAACTTATCATGGGTGGATATCTTTGAGGAAATACCTATCAAAGTTTCAAATTCTGCCCTTATCAGTGCTTTTATGACAGAACTGGAACCTGATTCTCCGGTTACCCAGTGTGATTATGATCGTCTTCAATTGTCAACCAGTTCATTAATGGAGAGGAACATGGAATTTTTGATTGAATGCATGGATGACTTGTCCCTAGAACAACAAAAGTTCCAATTCTACTATAGGAGCTTGTCGCGTCAGCAGGCTCAACAGCAAGCTTGGCTTCAGAAGAGAAGGGTGGAGAACATGTCACGTAAAGCTGCTGGAGAGGACCCTTTGCCTGAGGAAGATCCTTCAAACCCCATCTTCAAGCCACTCCCTGAACCATCACGGTTGGAGAGCTTCCTCATTACTAATCAAATTTCAAACTACTGCAACCAAATCAATGGGGTGTCAGGGCAGAGTTTTAACAGACTCTATTTGATGAAGGCTTTGCATGAGGAATGA 1002 0.4471 MARSFLQVAATEEAAPPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRADQGVLALKALKLSDAFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDSPVTQCDYDRLQLSTSSLMERNMEFLIECMDDLSLEQQKFQFYYRSLSRQQAQQQAWLQKRRVENMSRKAAGEDPLPEEDPSNPIFKPLPEPSRLESFLITNQISNYCNQINGVSGQSFNRLYLMKALHEE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03177 333 Gene3D Cytidine Deaminase, domain 2 2 209 - -
Adu04g03177 333 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 1 332 - -
Adu04g03177 333 MobiDBLite consensus disorder prediction 270 290 - -
Adu04g03177 333 CDD MPN_eIF3h 19 282 IPR027524 GO:0003743|GO:0005737|GO:0005852
Adu04g03177 333 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 16 333 IPR027524 GO:0003743|GO:0005737|GO:0005852
Adu04g03177 333 ProSiteProfiles MPN domain profile. 21 154 IPR037518 -
Adu04g03177 333 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 19 122 IPR000555 GO:0005515|GO:0008233|GO:0008237
Adu04g03177 333 Pfam C-terminal region of eIF3h 140 332 IPR045810 -
Adu04g03177 333 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 1 332 - -
Adu04g03177 333 SMART pad1_6 20 153 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03177 Adu-Chr4 119751673 119754717 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03177 84 332 Eukaryotic Initiation Factors Gene Family AT1G10840 83.936 3.99e-157 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03177 K03247 - gmx:100814297 631.713