Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03173 ATGTGTATGTATGTTGTTTGCAGAGCATGGGGTGAGGCTATTATCAAGATTGTTGAAGAGGTCACGAAAAGCGTTCCTCCCGTGCCTTTGTACATTGACCATCCACTTGGATGTGATTCTGAACTTGAAAAAGTGGCAAAATCACTTCTACAGATTGATTCTTGTGCTACCTGTTTGATGCTGGGAATTCATGGAGATGGTGAAATAAGCCAATTTGTTGCTGAGCTGTATAACAAGATTAGGCCTCACTTTGCAACTGCAAGTTTTCTTTCTAATATCAGTGAGAAAACAAATGCAAGTGGTGGTGGTCTAGAACATCTACAAGAAACACTTCTTTCTGAGATGGGAGAGGAGGTCAAGTCTAAGATCGGAAGCACATTCAAAGGATCCTCTGAAATAATACACAGGCTAGGCCATaaaagagttcttctggttttggatgatgttgataaaatccaacaactgaactcattagcaggacgagaagattggtttggtcatggtagtaggatcattataacaacaagacatgaaggtgtgctagaTGAGCATCGATTATGTAATGGTGTTGAGATTAAGAAGTACCACTTTGTTGGTGGACAGGTTGAGGAAGATGATGTAGAGGAAGGAGATGTAGTGGGCTTTACAAAATACTGGAGCTTTGTAAAAGAGCAGCTGTATGATGCCAACATTCACGTCGTCTCCATCATTGGCATGGGTGGATTGGGCAAGACTACTGTTGCTCAAAAGATCTATAAAAATAAAGAGGTCAAGAATCTGTTCCCTACCCGCGGATGGACTCGTGTTTCCAAAGATTACGAGCCAAGGGATGTATTGTTGAGGCTGCTCCAAGACTTGATGAAGTCCAAATCTGCATATCAAAATTTAGAAGTGGAGGATCTAAAGAAGAAAGTGAGAAATTACCTGAAGGGGAAAAAGTACTTGATAGTGCTCGATGATATTTGGAAGCCTGAAGTATGGGACGATCTGAAATCAGCCTTTCTAATTGGAAGCACTGGTAGCAAAATTTTAATAACGAGTCGTGATGAACAGGTAGCAAATTTTACAGGCTCAAGAAGCTGCAATCTTCCCTTCCTTAATAAAAAAGAAAGCTGGGAATTGTTTTGCAAGAAGGTGTTTTCGGGTAAAGAGTGTCCTTCTGAGTTGAAGCCTCATGGTAGATCAATTGTTAAAAGTTGTGGAGGTTTACCGCTTGCTATTGTTGCCATGGCAGGGGTGGTTGCCAAGAAGAAAAGGTTGGAAAGTGAGTGGCTGGGAATTAAGAAGCGCATCCACTGGCATCTCACCAGGGACGAGACCCAAGTCATGCATCTACTACAACATAGCTATGACAATTTGTCTAAAGAACTGAAGCCATGCTTTAGATATCTTGGTATCTACCCTGAAGATTTTGAGATTCCTGCTAGGGAATTAATCCAATTATGGATGGCTGAAGGTTTCATACAACCACAAGAAAGTGGATTACCAAATGCTCCAGAACCAGAAGAAGTTGGTGAGGAATTCTTAAAAGAGCTAGTGGATCGTAACATGGTACATGTGGCAACACGGAGGAGTGATGGGGGTATGAAAACATGCCTAATCCATGATCTCTTCCGTGACCTTTGCATAGTATTGAGCAAAGCTGACAAGTTTTTCGAGGTTTGCACAGTGTCCAATATCCATACACTAAGCAACCCTCAAAGATTGTCCTTCTTGTGCAGTGAAACTTCTTACATGTCTTCAGTGGAAACTAACCAATCAAGCACTCGTTCCTTGTTCATCTTTGCTGGAAAGGATTATTCAGATGATGCTTTGAAAAACTTCCAATCAGTTCAAGTGCTACATTTGGGAGGACGAGCATGGTTTCAAGGTATACCCACTAATTTTCCCGCAATGATCTTCCTAAAGTACTTGAAAATAACTAGAACTTCTAAACCAAGAAAAACTCCTGAGTGTATATGGAGCCTTTTGAATTTAGAAACCATGGATACAAGGGGTTGGAGCACGTCTTGCATTCCGAATGAATTTTGGAAGCTCAAGCGACTAAGACATGTCTATATATTATCTTCAGTTGGTGCGGGTCTACCTGGAGAGGATAGCAGAACAAAAACAAGAATGTGGAATCTTCAAACTCTGAGTGGAGTGGATTTGGATACACCAACAGCGTTACTATTCAGGGACGGCAGATTTCCCAACTTGAAAAGGTTGACTTTATGGTTGGACCCTAGAAGGGAGAAACATCCTTCGTGGCATGAATTATTATTGAGTTTGCAGCATCTAAGCAAACTTCATATGCTGAAACTACATTGCTGTCGTTCAGATCTTTCAATAGATGCAATGATGTTTCCTTTGAATCTTGCAAAGATTACCATCAAAGTGTTTGGTAAGGTGGACTCCAGTTCCATGAAGGCTCTAGGACAGCTTCCTAACCTCCAAGCTTTGAAACTAGAAGACGGTACCATATCAGACCCTCTTGATTGTGCAGCTGGGGATTTCCCTAAACTTGAAGTGTTCAAAATGGTGGAAGTGGAAGTTGAAAGTTGGGTGTTAGCGGAAGGTGCAATGCCTTGCCTTCGTCGTCTGCTCATAAGGGAGTGTTCTAAATTGCGTGAGCTTCCGAAACAACTGTGGTCCTTGAAAACCTTGGCAAAAGTCCATGTCGTTGAACCCTCTGATGAATTGGCAAACAGCTTGCAAGATGTTAAGGTGAATCATAACTGTGATCTCAAAATATCTTATTTCAAAAGATATTAA 2754 0.3954 MCMYVVCRAWGEAIIKIVEEVTKSVPPVPLYIDHPLGCDSELEKVAKSLLQIDSCATCLMLGIHGDGEISQFVAELYNKIRPHFATASFLSNISEKTNASGGGLEHLQETLLSEMGEEVKSKIGSTFKGSSEIIHRLGHKRVLLVLDDVDKIQQLNSLAGREDWFGHGSRIIITTRHEGVLDEHRLCNGVEIKKYHFVGGQVEEDDVEEGDVVGFTKYWSFVKEQLYDANIHVVSIIGMGGLGKTTVAQKIYKNKEVKNLFPTRGWTRVSKDYEPRDVLLRLLQDLMKSKSAYQNLEVEDLKKKVRNYLKGKKYLIVLDDIWKPEVWDDLKSAFLIGSTGSKILITSRDEQVANFTGSRSCNLPFLNKKESWELFCKKVFSGKECPSELKPHGRSIVKSCGGLPLAIVAMAGVVAKKKRLESEWLGIKKRIHWHLTRDETQVMHLLQHSYDNLSKELKPCFRYLGIYPEDFEIPARELIQLWMAEGFIQPQESGLPNAPEPEEVGEEFLKELVDRNMVHVATRRSDGGMKTCLIHDLFRDLCIVLSKADKFFEVCTVSNIHTLSNPQRLSFLCSETSYMSSVETNQSSTRSLFIFAGKDYSDDALKNFQSVQVLHLGGRAWFQGIPTNFPAMIFLKYLKITRTSKPRKTPECIWSLLNLETMDTRGWSTSCIPNEFWKLKRLRHVYILSSVGAGLPGEDSRTKTRMWNLQTLSGVDLDTPTALLFRDGRFPNLKRLTLWLDPRREKHPSWHELLLSLQHLSKLHMLKLHCCRSDLSIDAMMFPLNLAKITIKVFGKVDSSSMKALGQLPNLQALKLEDGTISDPLDCAAGDFPKLEVFKMVEVEVESWVLAEGAMPCLRRLLIRECSKLRELPKQLWSLKTLAKVHVVEPSDELANSLQDVKVNHNCDLKISYFKRY 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03173 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 464 IPR027417 -
Adu04g03173 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 195 IPR027417 -
Adu04g03173 917 Pfam NB-ARC domain 41 186 IPR002182 GO:0043531
Adu04g03173 917 Pfam NB-ARC domain 222 452 IPR002182 GO:0043531
Adu04g03173 917 SUPERFAMILY L domain-like 534 886 - -
Adu04g03173 917 Coils Coil 279 299 - -
Adu04g03173 917 Gene3D - 450 544 IPR036388 -
Adu04g03173 917 Gene3D Ribonuclease Inhibitor 577 913 IPR032675 -
Adu04g03173 917 PANTHER DISEASE RESISTANCE PROTEIN RP 205 912 IPR044974 GO:0006952
Adu04g03173 917 PANTHER - 205 912 - -
Adu04g03173 917 PRINTS Disease resistance protein signature 233 248 - -
Adu04g03173 917 PRINTS Disease resistance protein signature 308 322 - -
Adu04g03173 917 PRINTS Disease resistance protein signature 400 414 - -
Adu04g03173 917 PRINTS Disease resistance protein signature 758 774 - -
Adu04g03173 917 Gene3D - 365 449 IPR042197 -
Adu04g03173 917 Gene3D - 17 188 IPR027417 -
Adu04g03173 917 Gene3D - 203 361 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03173 Adu-Chr4 119720083 119722836 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03173 36 181 WRKY Transcription Factor Family AT4G12020 30.405 1.28e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03173 - - adu:107486181 1828.91