Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03170 ATGTGTATGTATGTTGTTTGCAGAGCATGGGGTGAGGCTATTGACAAGATTGTTGAAGAGGTCAGGAAAAGAGTTCCTCCCGTGCCTTTGTATATTGACCATCCACTTGGATGTGATTCTGAACTTGAAAAAGTGGAAAAATCACTTCTACAGATTGATTCTTGTGCTGCCTGTTTGATGCTGGGAATTCATGGAGATGGTGAAATAAGCCAATTTGTTGCTGAGCTGTATAACAAGATTAGGCCTCGCTTTGCAACTGCAAGTTTTCTTTCTAATATCAGTGAGAAAACAAATGCAAGTGGTGGTGGTCTAGAACATCTACAAGAAACGCTTCTTTCTGAGATGGGAGAGGAGGTTGAGGAAGATGATGTAGAGGAAGGAGATGTAGTGGGCTTTACAAAACACTGGAGCTTTGTAAAAGAGCAGCTGTATGATGCTAACATTAACGTCACATCCATCATTGGCATGGGTGGATTGGGCAAGACTACTGTTGCTCAAGAGATCTATAACAATAAAGAGGTCAAGAATTTGTTCCCTACCCGCGGATGGACTCGTGTTTCCAAAGATTACGAGCCAAGGGGTGTATTGTTGAAGCTCATCCAATCTTTGATGAAGTCCACATCTGCATATCAAAATTTAGAAGTGGAGGATCTAAAGAAGAAAGTGAGAAATTACCTGAAGGGGAAAAAGTACTTGATAGTGCTTGATGATATTTGGGAACCTGAAGTATGGGATGTTCTAAAATTAGCCTTTCCAAATGGAAGCCCTGGTAGCAAAATTTTAATAACGAGTCGTAATGAACAGGTGGCAAATTTTACAGGCTCAAAAAGCTACGAACTTCCTCCCCTTGATGAAAAAGAAAGCTGGGAATTGTTTTGCAAGAAGGTGTTTTCGGGTAAAGAGTGTCCTTCTGAGTTGGAGCCTCATGGTAAATCAATTGTTGAAAGTTGTGGAGGTTTACCACTTGCTATTGTTGCCATGGCAGGGGTCGTTGCCAAGAAGAAAAGGTTGGAAAGTGAGTGGCTGGGAATTAAGGAGCGCATCCACTGGCATCTCACCAGGGACGAGACCCAAGTCATGCAGGTACTACAACATAGCTATGACAACTTGTCTGAAGAACTGAAGCAATGCTTTAGATATCTTGGTATCTACCCTGAAGATTTTGAGATTCCTGCTAGGGAATTAATCCAATTATGGATGGCTGAAGGTTTCATACAACCACAAGAAAGTGGATTACCAAATGCTCCAGAACCAGAAGAAGTTGGTGAGGAATTCTTAAAAGAGCTAGTGGATCGTAACATGGTACATGTGGCAACACGGAGGAGTGATGGGGGTATGAAAACATGCCTAATCCATGATCTCTTCCGTGACCTTTGCATAGTATTGAGCAAAGCTGACAAGTTTTTCGAGGTTTGCACAGTGTCCAATATCCATACACTAAGCAACCCTCAAAGATTGTCCTTCTTGTGCAGTGAAACTTCTTACATGTCTTCAGTGGAAACTAACCAATCAAGCACTCGTTCCTTGTTCATCTTTGCTGGAAAGGATTATTCAGATGATGCTTTGAAAAACTTCCAATCAGTTCAAGTGCTACATTTGGGAAATAAAGCACGTTTTCTACCTGTACCCAGTAATTTTCAGTTTATGATCTTCCTAAAGTACTTGAAAATAACTCGAACTTCTAAACCAAGAAAAGCTCCTGAGTGTATATGGAGCCTTTTGAATTTAGAAACCATGGATATAAGGGGTTGGATCACGTGTTGCATTCCGAATGATTTTTGGAAGCTCAAGCGACTAAGACATGTCTCTATTTCCTCAGATACTGTGAGTCTACCAAAATATGAGAAAGGAACAACAATGTGGAATCTTCAAACTCTGAGTGGAGTGGATTTGGATACACCAACAGCGTTACTATTCAGGGACGGCAGATTTCCCAGCTTGAAAAGGTTGAGTTTATGGTTGGACCCTACAAGGGAGAAACGTCGTTCGTGGCATGAATTATTATCGAGTTTGCAGCATCTAAGCAAACTTTATAAGCTGAAACTACATTGCTGTCATTCAGATCTTTCAATAGATGCAATGATGTTTCCTTTGAATCTTGCAAAGATTTCCATCAAAGTGTTTGGTAAGGTGGACTCCAGTTCCATGAAGGCTCTAGGACAGCTTCCCAACCTCCAAGCTTTGAAACTATTAGAAGGTACCATATCAGACCCTCTTGATTGTGCCGCTCGAGATTTCCTTAAACTTGAAGTGTTCAAAATGGTGAAAGTGAAAGTTGTAAGTTGGGTGTTAGCGGAAGGTGCAATGCCTCGCCTTCGTCGTCTGCTCATAAAGGAGTGTCCTAAATTGTGTGAGCTTCCGGAACAACTGTGGTCCTTGACAACCTTGGCAGAAGTCCATGTCGTTGAACCCTCTCATGAATTGGAAAACAACTTGCAAGATGTTGAGGTAAATGATAACTGTGATCTCACAATATCATATATGGCAAAATATTAA 2496 0.4123 MCMYVVCRAWGEAIDKIVEEVRKRVPPVPLYIDHPLGCDSELEKVEKSLLQIDSCAACLMLGIHGDGEISQFVAELYNKIRPRFATASFLSNISEKTNASGGGLEHLQETLLSEMGEEVEEDDVEEGDVVGFTKHWSFVKEQLYDANINVTSIIGMGGLGKTTVAQEIYNNKEVKNLFPTRGWTRVSKDYEPRGVLLKLIQSLMKSTSAYQNLEVEDLKKKVRNYLKGKKYLIVLDDIWEPEVWDVLKLAFPNGSPGSKILITSRNEQVANFTGSKSYELPPLDEKESWELFCKKVFSGKECPSELEPHGKSIVESCGGLPLAIVAMAGVVAKKKRLESEWLGIKERIHWHLTRDETQVMQVLQHSYDNLSEELKQCFRYLGIYPEDFEIPARELIQLWMAEGFIQPQESGLPNAPEPEEVGEEFLKELVDRNMVHVATRRSDGGMKTCLIHDLFRDLCIVLSKADKFFEVCTVSNIHTLSNPQRLSFLCSETSYMSSVETNQSSTRSLFIFAGKDYSDDALKNFQSVQVLHLGNKARFLPVPSNFQFMIFLKYLKITRTSKPRKAPECIWSLLNLETMDIRGWITCCIPNDFWKLKRLRHVSISSDTVSLPKYEKGTTMWNLQTLSGVDLDTPTALLFRDGRFPSLKRLSLWLDPTREKRRSWHELLSSLQHLSKLYKLKLHCCHSDLSIDAMMFPLNLAKISIKVFGKVDSSSMKALGQLPNLQALKLLEGTISDPLDCAARDFLKLEVFKMVKVKVVSWVLAEGAMPRLRRLLIKECPKLCELPEQLWSLTTLAEVHVVEPSHELENNLQDVEVNDNCDLTISYMAKY 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03170 831 PANTHER - 103 826 - -
Adu04g03170 831 PRINTS Disease resistance protein signature 225 239 - -
Adu04g03170 831 PRINTS Disease resistance protein signature 150 165 - -
Adu04g03170 831 PRINTS Disease resistance protein signature 767 783 - -
Adu04g03170 831 PRINTS Disease resistance protein signature 317 331 - -
Adu04g03170 831 PANTHER DISEASE RESISTANCE PROTEIN RP 103 826 IPR044974 GO:0006952
Adu04g03170 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 381 IPR027417 -
Adu04g03170 831 Pfam NB-ARC domain 138 369 IPR002182 GO:0043531
Adu04g03170 831 Gene3D - 372 460 IPR036388 -
Adu04g03170 831 Gene3D - 124 280 IPR027417 -
Adu04g03170 831 SUPERFAMILY L domain-like 451 800 - -
Adu04g03170 831 Gene3D Ribonuclease Inhibitor 493 826 IPR032675 -
Adu04g03170 831 Gene3D - 282 371 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03170 Adu-Chr4 119696286 119699030 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03170 147 378 WRKY Transcription Factor Family AT5G45050 25.941 5.42e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03170 - - adu:107486181 1238.02