Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03162 ATGAAAAAAAAGAGAAAAAAAGAAAAAAAGTATAGTCACAGCTCAAAACATCAACGGCTTTCATCGAATTCACGAGACGCCGGTGACGCACCCGCGCGTGACGGAATTCGATCGAATCGGGATTTTGTTGCAATCATGACTCAGGCTGTGGAGGTTCTAAACCGGTATGGAACGGATCTTGTTGGTGAAGCCAGGGGTTCTGATTCTGAGTGTTTGGCGGGTTTTGAGTGTTTCTTGAACATCGTGAGGGCACTGGGGATGGGGTCATGCATCTCAGAGGCTGGTGGTCACTCTCCTCCCCTTCTTCCAATCCAGCCAGACACCAATATGGATGGTGGGAAGAAGAGGAGGTTGAAGGGTTCCCCTTCCTTTGATTACAAAGTGCCTGGGAGAATGCACCTGAATGGGTCCAGCGATGTTGCATCTTTGTACTGCAAGCAAGGTAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTCTGTTCAAAGGAGGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAGGAAAGTCAGGGATTCTTTCCCTTTAAAGCTTAGTGCTCAATGGGATTTTCACCGTAAGAGTACAGATGGGCTGAGTGATCAGGGCAGTGCCGCAGGAAGTTACAAATCTGAAGAGATTGGATTTAGACTGGTTGATGAGAAACCTAGATTGACTGATCATGAGCCTGATGGAACAGATACTATCTTGACATTAAAAGAATCCTTTTTGAAGGCTTCTAAGATTATGGATAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGCGGGACTACAGCTGTTACCTTGGTTAAGCAGGGCAAGGACCTTGTTATTGGAAATGTTGGGGACTCCAGAGCTATATTGGGTACCCGAGATCATGATGATAATCTTATTGCTGTTCAATTGACAATCGACCTCAAGCCAAATCTTCCAAGGGAAGAAGAGCGAATCAGGCTTCGTAAAGGAAGGGTCTTTCCCCTTCAGAATGAACCGGATGTTGCTCGAGTTTGGCTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCAAGGGCTTTTGGAGATTTTTGCTTGAAGGACTTTGGACTGATTTCAGTTCCAGATGTGTCATATCATCGCCTTACTGAGAATGATGAATTTGTTGTATTAGCAACAGATGGGATATGGGATGTTTTATCAAATGAAGAGGTTGTGGACATCGTGGCATCTGCTCCACGCCCTTCTGCGGCGCGATCACTGGTGGAGTCAGCTGTTAAAGCATGGAGGATGAAGTTCCCTTTGTGCAAGGTTGATGATTGTGCTGCAGTTTGCCTCTTCGTTGATTCAAGTTCGGACTCGGGTTCGGCATCGACCGCAGATGACTCAACACTAGAGCCACCAATTGACCAATCCGAGCAGTCTTCTCTCCTTAGCGAGAAGGGAACTGGCGTGGATGCTGAAAAACAGCAACAATAG 1497 0.4609 MKKKRKKEKKYSHSSKHQRLSSNSRDAGDAPARDGIRSNRDFVAIMTQAVEVLNRYGTDLVGEARGSDSECLAGFECFLNIVRALGMGSCISEAGGHSPPLLPIQPDTNMDGGKKRRLKGSPSFDYKVPGRMHLNGSSDVASLYCKQGRKGINQDAMLVWENFCSKEDTIFCGVFDGHGPYGHRVARKVRDSFPLKLSAQWDFHRKSTDGLSDQGSAAGSYKSEEIGFRLVDEKPRLTDHEPDGTDTILTLKESFLKASKIMDKELKLHPDIDCFCSGTTAVTLVKQGKDLVIGNVGDSRAILGTRDHDDNLIAVQLTIDLKPNLPREEERIRLRKGRVFPLQNEPDVARVWLPNSDFPGLAMARAFGDFCLKDFGLISVPDVSYHRLTENDEFVVLATDGIWDVLSNEEVVDIVASAPRPSAARSLVESAVKAWRMKFPLCKVDDCAAVCLFVDSSSDSGSASTADDSTLEPPIDQSEQSSLLSEKGTGVDAEKQQQ 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03162 498 MobiDBLite consensus disorder prediction 1 35 - -
Adu04g03162 498 MobiDBLite consensus disorder prediction 457 498 - -
Adu04g03162 498 Pfam Protein phosphatase 2C 216 418 IPR001932 -
Adu04g03162 498 SMART PP2C_4 129 452 IPR001932 -
Adu04g03162 498 SUPERFAMILY PP2C-like 138 455 IPR036457 -
Adu04g03162 498 MobiDBLite consensus disorder prediction 1 16 - -
Adu04g03162 498 Gene3D - 137 460 IPR036457 -
Adu04g03162 498 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 87 461 - -
Adu04g03162 498 PANTHER ALPHABET, ISOFORM E-RELATED 87 461 - -
Adu04g03162 498 ProSiteProfiles PPM-type phosphatase domain profile. 140 454 IPR001932 -
Adu04g03162 498 CDD PP2Cc 140 454 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03162 Adu-Chr4 119605181 119609169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03162 120 498 PP2C-type Phosphatase Gene Family AT1G16220 56.623 1.02e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03162 - - gmx:100802479 758.059