Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03161 ATGGCAGATGGTGTCGTTTCCTTCCTGATTCAGAACTTGTCACAGCTGCTTGTTGATGAAGCCAAGCTGCTGTCTGGTGTGGAGGGAAAAGTCAAGTCCCTCATCAGCGAGCTCAAGTTCATAGACATCTTCCTCAAGAGTTCAGAGGGGAAGCGCAACAACAACATAGTCAAGGAAGTTGTGAACCAGATCAGAGATGTTGCCTATGAAGCTGAAGATGTTGTTGACACCTACGTCGCCAATGTTAGCCTCCACAGAAGCAGAAGCATCCTGGGGAAGATGTTCCATTGTGTTGGCCAAGCTATGATGCTTCATGATGTGGATGCTGAGATTGAGAATATCAAGAGATCCATTGCTGAGATATACAGCAACAAGGACAAGTATGGCATTGGAGAAGGTGAGTTCCAGTGTGGTGGAGAAGCTACCCCGGCTGCCACGGAGGCGCTCCGGAAGAGGAGGAGGGATGTGGAGGAAGAAGATGTGGTTGGATTGGTTCATGAGTCTGATACTGTCATTAAGAAACTATTGAAGAGCGATTCGCGCCTTCAAATAGCTTCCATAATTGGTATGGGTGGTTTGGGAAAGACTACCCTTGCTAGGAAGATCTACAATAGTAAGAAGGTGAAGGAGAAGTATCCATTTCGTGCATGGGGTTATGTGTCTAATGAGTATAGAGCTAAAGAGTTATTGTTGAGCCTTATTCGGTGTTTGTCAACATGGAAATCTAATGAAGAAAGTGAAGAGGAACTGAAGGAGCATCTAAGAGAGTGCTTGAATGGGAAGAAGTACTTAATTGTGCTTGATGATATTTGGAAAACAGAAGTGTGGGATGATGTAAAAGGAGCTTTTCCAGATGACAATAATGGTAGCAGAATCTTGATAACGAGTCGAATTGGAGAGGTAGCTGCTTATATGGGAACAATGCCTCCTTACTTCCTTCCATTTCTCACTGAAGAACAAAGCTGGGAACTTTTCTCCAAGAAAGTGTTTAGAGGAGAAGAAGATTGTCCACCTGATCTAAAAGATTTAGGCATGTCAATTGTTGAAAGCTGTAGTGGCTTACCTCTTGCTATTGTGGTGCTAGCTGGGCATGTTTCCAAGAAGGAAAAGTCTCTTAGAGAGTGGTCAAGAATCAAAGAACATGTCAATTGGCTTCTTGTTCATGACAACAACACTATGGTGGTGATGGACATACTAAAACTTAGCTATGACAGTTTGCCTCAAAAATTGAAGTCTTGCTTTTTATACTTTGCAATCTATCCTGAAGATTATGAGATCCCTGCAAGAAACCTTATCCAGTTATGGGTAGCTGAAGGTTTTATACAAATTCCAGAAACTGGAACATCAGATACTCTAGCACTGGAAGACATTGCAGAGTATTACTTGGAAGAGTTGGTTGATCGTAGTCTGGTGCAAGTGGCAAGCAAGAGGAGCGGCGGGGGCGTGAAAACATGTCGAATTCATGATCTTCTTCGCGATCTTTGCGTATCTGAGAGCAAAGCAAGTAAATTCATAGAGATACATAGAGAGTTGGACATCAACAAATCCAACTCTAGAAAGATGTCTTTCCACCACAGCACACAATTCTCATCCTCACCAAACAAAAATAACCACTTTCATACACATTCCTTGTTCCTCTTTGGTGAAGAGCTTACCTGGGATGATGAATCAAAAGGATGTAAACAGTTCACGAAAAGCTTCAAGTTGGCTCGTGTTCTACACCTCAACAAAGTGTTGTTGGATTTGCCACCTAGTGGCTTGAAGCTGATGATCCATCTAAGGTACTTGAAGATAAAAACAGATTCTAGATCTGCTGAAAATATTTTAGATTCTATATCCAACCTTAGGAATCTAGAAACACTGCATTTAAGTTGTGACTGGGTGGTCTCCATCCCAATCAAGATATGGAAGTTGAAGCGGTTGAGGCATTTCAACTTGAGAATCAAAGAGATTTCTCAGATGTCTAGAGTAACAAACAATGAAAGAATGTCCAACCTTCAAACTCTTTGTGAAGTGCCTCTCTATTCAGAAACTATATCAATGCTTAACAACAATGGAAGCTTCCCTAACTTAAAGAAGCTGGGTTTATGTTTCTATCCAAACTTCCAGCAATCTTCTACAGGTGCTGCCAATCTTTCATCACTTAGCATGAACCACCTTAGCAAACTATGCACAATCAAAATAAGAGGTGATCTCTTTAATCCATTCAGTGCAAATGGATTTAAGTCAACGTTTTTTCCATCAATCCTTGAGAAGATTACCTTGGTAGACTTCAAGGAATTGGACTTTAAAGCTCTGGGGAAACTCCGGAATCTGAGAATTTTGAAACTGAGAAGAGGATCAACAGGGGATGGTATTCATTGTGTGGCCGGAGAGTTCCCGGCGCTTCAAATGCTTCAGATGAAGGAAGTGAAGGTTGAAAGGTGGATACAAGATGAAGGTGCAATGCCAAGTCTTAGTCGTTTGATCATCAAAGGTGGTGCAGTGGAAGACCTTCCTCTACATCTTCAATCCTTGGCTTCCATTAAATAG 2532 0.4179 MADGVVSFLIQNLSQLLVDEAKLLSGVEGKVKSLISELKFIDIFLKSSEGKRNNNIVKEVVNQIRDVAYEAEDVVDTYVANVSLHRSRSILGKMFHCVGQAMMLHDVDAEIENIKRSIAEIYSNKDKYGIGEGEFQCGGEATPAATEALRKRRRDVEEEDVVGLVHESDTVIKKLLKSDSRLQIASIIGMGGLGKTTLARKIYNSKKVKEKYPFRAWGYVSNEYRAKELLLSLIRCLSTWKSNEESEEELKEHLRECLNGKKYLIVLDDIWKTEVWDDVKGAFPDDNNGSRILITSRIGEVAAYMGTMPPYFLPFLTEEQSWELFSKKVFRGEEDCPPDLKDLGMSIVESCSGLPLAIVVLAGHVSKKEKSLREWSRIKEHVNWLLVHDNNTMVVMDILKLSYDSLPQKLKSCFLYFAIYPEDYEIPARNLIQLWVAEGFIQIPETGTSDTLALEDIAEYYLEELVDRSLVQVASKRSGGGVKTCRIHDLLRDLCVSESKASKFIEIHRELDINKSNSRKMSFHHSTQFSSSPNKNNHFHTHSLFLFGEELTWDDESKGCKQFTKSFKLARVLHLNKVLLDLPPSGLKLMIHLRYLKIKTDSRSAENILDSISNLRNLETLHLSCDWVVSIPIKIWKLKRLRHFNLRIKEISQMSRVTNNERMSNLQTLCEVPLYSETISMLNNNGSFPNLKKLGLCFYPNFQQSSTGAANLSSLSMNHLSKLCTIKIRGDLFNPFSANGFKSTFFPSILEKITLVDFKELDFKALGKLRNLRILKLRRGSTGDGIHCVAGEFPALQMLQMKEVKVERWIQDEGAMPSLSRLIIKGGAVEDLPLHLQSLASIK 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03161 843 PRINTS Disease resistance protein signature 184 199 - -
Adu04g03161 843 PRINTS Disease resistance protein signature 257 271 - -
Adu04g03161 843 PRINTS Disease resistance protein signature 351 365 - -
Adu04g03161 843 PRINTS Disease resistance protein signature 613 629 - -
Adu04g03161 843 Pfam Rx N-terminal domain 5 88 IPR041118 -
Adu04g03161 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 417 IPR027417 -
Adu04g03161 843 Gene3D Ribonuclease Inhibitor 536 843 IPR032675 -
Adu04g03161 843 SUPERFAMILY L domain-like 487 841 - -
Adu04g03161 843 PANTHER DISEASE RESISTANCE PROTEIN RP 44 825 IPR044974 GO:0006952
Adu04g03161 843 Gene3D - 140 308 IPR027417 -
Adu04g03161 843 Gene3D - 408 497 IPR036388 -
Adu04g03161 843 CDD RX-CC_like 2 121 IPR038005 -
Adu04g03161 843 Gene3D - 315 407 IPR042197 -
Adu04g03161 843 Gene3D - 5 109 - -
Adu04g03161 843 PANTHER - 44 825 - -
Adu04g03161 843 Pfam NB-ARC domain 169 404 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03161 Adu-Chr4 119601820 119604351 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03161 182 494 WRKY Transcription Factor Family AT5G45050 24.308 4.74e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03161 - - adu:107486455 1630.92