Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03157 ATGGCATTCCTTCCACAACCACGTGAATCAGCAGAACCCGAAGATTGCGAAGAAACCATTGTCACAACCGCAACAGCGGCAACTACAGCAAGAGCAATAGCAGCAGCAGAAGAAGATAACGGAACCATCGACGTTCATACAACAAGAGGCGCAACCATAAGGTACCTTCCATTGGATCATCTCTACTCTGCCACGTCACCCTGCAGTGGCTCCTCCAACGTCATGTCCAAGAAAGTTAAGGCTCGCAAGCTCACACCGCATTTTCACCAAAACGACGACGTTAGCGCCAAAACGACGAACTGCAACAACAACGGTGGTGATGATGCTGACAATGTTTCTACTGATAGTTCTGTTGTTGTTGTTCCGCCGAATGATGTTGACAGCAATGATGATAAGCCACCGCTAATTTTTGTTTACTCTCGGCGGCGAAAGAGGGGTGGTTCTGGTTCTACTACTGCGTCGTTTTACAATTCATTATCGGGTCGGGCTGGGAAGGACCCGGCGGAAAGGGTGACTTCGAAGAAGAGGAAGATTGGGACCACCGAGCTGGAGAAATTGGGAGTGGATTTGGGCGCGTTGGGAGTGCTTGACGACGGGCCTAGATTGAGAGAATGCCGCATTAGTAATAACGATGGTGGTGGTGGTGGTGGTGGCGGCGTTTCAGTGGAGAAGTTGGTATCTGAATCTCGTACAGTGAAGAGATGGGTTGGGTTGAGTTTTGATAATGCTGACCCTGAGGCGTTCATTGGATTGCGATGCAAGGCAATATTCTGTGATTGTTTTATGCAGGTGTTTTGGCCAATGGATATAAAATGGTACGCTGGCCATGTCAAAGGTTATGATATCGAAACTAAGATACACCATGTAAAATATGATGATGGCGAGGAAGAAAATTTAATTCTTTCAAATGAAAATGTGAAATTTCATATCTCCCGCGAGGAGATGAAGCGCTTGAATTTGAATTATGGCAAAGTTCGTGACAGTAATGTCTCTGATTGTGATGTTGAAGAGATGCTTGCGATGGCTGCAAGTTTGAATGATTGTCAACAATTTGAACCTGGAGACATCGTATGGGCTAAGCTAACAGGCCATGCAATGTGGCCAGCTGTTGTTCTGGATGAATCACTTGCACGCAAGTGCAAGGGTTTGAATACATTGGGAGGAAACTCGGTTCCTGTCCAGTTTTTTGGCACCCATGACTTTGCAAGGGTTAGACTGCAGCAGGTGAAATCGTTCCTAAGTGGACTTCTTACTGAGCTATACACAAAGTGCAACAAAACCAGTTTCTTTGACAGTATGGAAGAGGCAAAGAGGTATTTAAATGAACAGAAACTTCCCTCAGAGATGCTAGCGTTGCAAAAAGGATGTACAGCTGATGACTGTAAAAATGTAACTGGAGAGGATGGACAGTGTACAGGTTCAGGAGAAGATTCTTTGAGTGACAAAGAGCCTTCCATAGCACTGGAAAACATTAAATTTCCCTTGGAAGTAGGAGACCTACAAATTATAAGCCTTGGGAAAGTAGTTGAAGATTCTTCATCTTTCTGTGATGGAAAATCCATCTGGCCTGAAGGGTACACTGCAGTGAGGAAGTTTACTTCAGTCACTGATGCTAAAGTATCTGCTGCTTATAAAATGGAGGTCCTGAGAGATCCAGAGTCCAAAGAACGACCTCTATTTAGAGTGACAGTTGATGGTGGTGAGCAGTTCAACAATCATACACCATCAGCTTGCTGGAACCAAATATACCAAAGGATAAATAAATTAGAAAAGGATGGTTCTGAAGCTTCTGTTGCGGAAGATAGGGTAGAAAGCGGATATGAATCTGGGACTGGTATGTTTGGTTTCTCCAATCCTGAAGTAGCTAAACTAATACAGGGATTATCCAAATCCAAAGTTTCTTCAAAGAAATCAAGTTTGAAGTTAGGTTCCAGAAGATATAATGACCTACCTGTTGGTTATAGGCCGGTTCATATTAATTGGTTTGATCTTGATAAGTGCAATGTCTGCCACATGGATGAGGAATACGAGACCAATCTGTTTCTGCAGTGTGACAAATGCAGGATGATGGTACATGCTAGATGCTATGGAGAACTGGAATCTGTTAATGGAGTGCTATGGTTGTGCAACTTATGTCGATCGGGTGATCCTCCACCACCTTGTTGCTTATGTCCACTAATAGGAGGGGCAATGAAGCCTACAACAGATGGCCGATGGGCACATTTGGCTTGTGCTATGTGGATACCTGAGACTTGCTTAGCTGATGTAAAAAAGATGGAACCTATTGATGGTTTGAACAGAATCAGTAAGGACCGCTGGAAGTTGTTATGTAGCATATGTGGTGTATCTTATGGTGCTTGCATCCAATGTTCAAACAATTCTTGCCGAGTAGCATATCATCCACTTTGTGCTCGTGCTGCTGGTCTTTGTGTTGAGCTTGAGAATGAGGACAGGCTCTATCTACTTTCTGTTGATGATGATGAAGAGCAGTGCATTCGACTGCTTTCTTTTTGCAAGAAACATAGGCAGCCATCTAATGAGCATTCTGTTGCCAATGAACGTATTGTTCGAGCTGCGGGTCCATGTTCTGACTATGAACCACCACCCAACCCATCTGGTTGTGCTCGAAGTGAACCATATGATTATTTTGGCCGGAGAGGACGGAAAGAACCTGAAGTTCTTGCAGCTGCATCGTCAAAACGTTTGTTTGTTGAGAACCAACCATACCTAATAGGTGGGTACTGCCAGCATGGGTTGTCTAATGAACTAGAACCTTCTGGCAGAGGAGTCTGCGCCCAAGTACATAGGCTGAGGACCTCTTTGGGTGATGATTCGGGCGACATACTTTCTATTTCAGAGAAGTACAAGTACATGAGGAAAACTTTTCGCAAACGGCTAGCATTTGGGAAATCAAGAATTCATGGATTTGGCATATTTGCAAAGCATCCATATAAAGGTGGAGACATGGTGATTGAATACACTGGTGAACTTGTTAGGCCTCCCATAGCTGACCGGAGAGAGCGCTTCATATACAATTCTTTGGTGGTAAAACAAAAGAGTCAGATCTTCAATTTATTGCTCACCTATATAGTTTCTGTTTCTGTGCAGCCGAATTGCTATTCGCGAGTTATTAATGCTAATGGGGATGAGCATATTATAATATTTGCAAAGAGGGACATTAAACAATGGGAAGAGCTTACATATGATTATAGATTTTTCTCAATTGATGAGCGGCTTTCTTGTTACTGTGGTTTCCCAAAATGCCGAGAGGAGAATGAGATTTTTAAAGCTTTATGCACAGAAGTTGTAAGATCCATCTGGATCCTTTTTTGTCCAACAACTTCTGCCATGGATTCTACGAGTTTCCTGGACGACATTGTTGTACATATCCCATTGCTTCATCGTAACTCTAACTGA 3417 0.4346 MAFLPQPRESAEPEDCEETIVTTATAATTARAIAAAEEDNGTIDVHTTRGATIRYLPLDHLYSATSPCSGSSNVMSKKVKARKLTPHFHQNDDVSAKTTNCNNNGGDDADNVSTDSSVVVVPPNDVDSNDDKPPLIFVYSRRRKRGGSGSTTASFYNSLSGRAGKDPAERVTSKKRKIGTTELEKLGVDLGALGVLDDGPRLRECRISNNDGGGGGGGGVSVEKLVSESRTVKRWVGLSFDNADPEAFIGLRCKAIFCDCFMQVFWPMDIKWYAGHVKGYDIETKIHHVKYDDGEEENLILSNENVKFHISREEMKRLNLNYGKVRDSNVSDCDVEEMLAMAASLNDCQQFEPGDIVWAKLTGHAMWPAVVLDESLARKCKGLNTLGGNSVPVQFFGTHDFARVRLQQVKSFLSGLLTELYTKCNKTSFFDSMEEAKRYLNEQKLPSEMLALQKGCTADDCKNVTGEDGQCTGSGEDSLSDKEPSIALENIKFPLEVGDLQIISLGKVVEDSSSFCDGKSIWPEGYTAVRKFTSVTDAKVSAAYKMEVLRDPESKERPLFRVTVDGGEQFNNHTPSACWNQIYQRINKLEKDGSEASVAEDRVESGYESGTGMFGFSNPEVAKLIQGLSKSKVSSKKSSLKLGSRRYNDLPVGYRPVHINWFDLDKCNVCHMDEEYETNLFLQCDKCRMMVHARCYGELESVNGVLWLCNLCRSGDPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKKMEPIDGLNRISKDRWKLLCSICGVSYGACIQCSNNSCRVAYHPLCARAAGLCVELENEDRLYLLSVDDDEEQCIRLLSFCKKHRQPSNEHSVANERIVRAAGPCSDYEPPPNPSGCARSEPYDYFGRRGRKEPEVLAAASSKRLFVENQPYLIGGYCQHGLSNELEPSGRGVCAQVHRLRTSLGDDSGDILSISEKYKYMRKTFRKRLAFGKSRIHGFGIFAKHPYKGGDMVIEYTGELVRPPIADRRERFIYNSLVVKQKSQIFNLLLTYIVSVSVQPNCYSRVINANGDEHIIIFAKRDIKQWEELTYDYRFFSIDERLSCYCGFPKCREENEIFKALCTEVVRSIWILFCPTTSAMDSTSFLDDIVVHIPLLHRNSN 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03157 1138 ProSiteProfiles PWWP domain profile. 353 415 IPR000313 -
Adu04g03157 1138 SUPERFAMILY FYVE/PHD zinc finger 658 728 IPR011011 -
Adu04g03157 1138 SMART set_7 964 1077 IPR001214 GO:0005515
Adu04g03157 1138 ProSiteProfiles FYR domain FYRN motif profile. 492 551 IPR003888 GO:0005634
Adu04g03157 1138 Pfam F/Y-rich N-terminus 498 548 IPR003888 GO:0005634
Adu04g03157 1138 SMART fyrc_3 559 653 IPR003889 GO:0005634
Adu04g03157 1138 Pfam PHD-zinc-finger like domain 720 841 - -
Adu04g03157 1138 CDD ePHD_ATX1_2_like 727 841 IPR041956 -
Adu04g03157 1138 ProSiteProfiles Zinc finger PHD-type profile. 664 715 IPR019787 -
Adu04g03157 1138 SUPERFAMILY SET domain 960 1089 IPR046341 -
Adu04g03157 1138 SMART fyrn_3 507 551 IPR003888 GO:0005634
Adu04g03157 1138 Gene3D - 493 630 - -
Adu04g03157 1138 Pfam PWWP domain 354 440 IPR000313 -
Adu04g03157 1138 ProSiteProfiles FYR domain FYRC motif profile. 555 641 IPR003889 GO:0005634
Adu04g03157 1138 MobiDBLite consensus disorder prediction 91 123 - -
Adu04g03157 1138 CDD PHD_ATX1_2_like 666 712 IPR042010 -
Adu04g03157 1138 PANTHER PHD FINGER PROTEINS 37 1090 - -
Adu04g03157 1138 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX2 37 1090 - -
Adu04g03157 1138 Gene3D - 262 307 - -
Adu04g03157 1138 Pfam F/Y rich C-terminus 557 632 IPR003889 GO:0005634
Adu04g03157 1138 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 712 844 IPR013083 -
Adu04g03157 1138 Pfam SET domain 1034 1070 IPR001214 GO:0005515
Adu04g03157 1138 ProSitePatterns Zinc finger PHD-type signature. 667 712 IPR019786 -
Adu04g03157 1138 Gene3D SET domain 948 1091 IPR046341 -
Adu04g03157 1138 ProSiteProfiles Extended PHD (ePHD) domain profile. 718 842 IPR034732 -
Adu04g03157 1138 MobiDBLite consensus disorder prediction 86 134 - -
Adu04g03157 1138 SMART PWWP_4 351 413 IPR000313 -
Adu04g03157 1138 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 631 711 IPR013083 -
Adu04g03157 1138 Pfam PHD-finger 678 713 - -
Adu04g03157 1138 Gene3D - 340 450 - -
Adu04g03157 1138 ProSiteProfiles SET domain profile. 964 1071 IPR001214 GO:0005515
Adu04g03157 1138 SMART PHD_3 666 713 IPR001965 -
Adu04g03157 1138 SMART PHD_3 776 842 IPR001965 -
Adu04g03157 1138 SUPERFAMILY Tudor/PWWP/MBT 347 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03157 Adu-Chr4 119543477 119551834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03157 667 812 C2H2 Transcription Factor Family AT3G14740 40.397 2.01e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu04g03157 zf-HC5HC2H_2 7.4e-33 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03157 - - gmx:100808923 1531.54