LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu04g03151	ATGTTTATGTCTTCTCTCCTTTGGAGCTGCATTGCTATGTGTGTTTCACTTGCACTTGCACTTCCACACCCTTCTTCTTCTGCTTCTTCTTCTTCACACCAACCTCTTAAGATTACTCGCTTACCAGGTCAACCCCATGTTGAGTTTCAACAGTTTTCAGGTTATGTTACTGTTGATAACAGCAACAACAAAGCACTTTTCTTCTACTTTGTTGAAGCTCAAAAGGATGCACCTTCCAAACCCCTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCTTCTATTGGAGTTGGTGCATTTTCTGAAAATGGACCATTTAGGCCAAAAGGAGAGGCCTTGGTGAGGAACCAATTCAGCTGGAACAGAGAAGCAAATGTTTTGTACTTGGAAACACCAATTGGAGTTGGATTCTCTTATTCAAAAGATACTTCCTCTTATGTGGGTGTAAATGACAAGATCACAGCCAGGGATAACTTAATATTCTTGCAAAACTGGTTTGTAAAGTTCCCACACTACAGAAACAGAAGTTTGTTCATAGTAGGAGAAAGCTATGCTGGCCACTATGTTCCTCAACTTGCTGAGCTTATGCTAGAATTCAACAGAAAAGAGAAGTTGTTCAATTTAAAAGGCATTGCTCTTGGCAACCCAGTTCTTGAATTCGAAACAGATTTCAATTCAAGAGCTGAGTTCTTCTGGTCACATGGACTAATCTCAGATGTAACATTTCAAATGTTCACATCTGTGTGTAACTATTCAAGATATGTGAGGGAATATTATAGTGGTGCTGTTTCTCCTATGTGTTCAAGGGTTATGAGCCAAGTTAGCACAGAAACCAGTAGATTCGTCGACAAGTATGATGTTACACTTGATGTTTGTATATCTTCAGTGTTTTCACAAACCAAGGTCCTCAATCCTCAGCAAGTTACCGAAACCATAGACGTGTGCGTTGAAGATGAAACGGTGAATTATCTGAACAGGAAGGATGTTCAGTCGGCTTTGCATGCGCGACTGGTCGGAGTAACAAGATGGTCTGCTTGCAGCAATGTACTAGATTATGAGCTGCGCGATTTGGAGATACCAACAATCACAGTTGTTGGTAAATTAGTCAAGGCAGGAATACCAGTCTTGGTCTACAGTGGTGATCAGGATTCAGTTATACCATTGACTGGAAGTAGAAAATTAGTGCACCAATTGGCAAGAAAACTGAGGCTGAGAACCACTGTGCCATACAGGGTCTGGTTTGAGGGGGAGCAGGTGGGTGGCTGGACTCAAGTTTATGGTAATATCCTTTCATTTGCCACCATTAGAGGAGCATCACATGAAGCTCCATTTTCACAGCCTAAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAGGGTCGACCTCTACCTGAAGAATTTTAA	1404	0.4174	MFMSSLLWSCIAMCVSLALALPHPSSSASSSSHQPLKITRLPGQPHVEFQQFSGYVTVDNSNNKALFFYFVEAQKDAPSKPLVLWLNGGPGCSSIGVGAFSENGPFRPKGEALVRNQFSWNREANVLYLETPIGVGFSYSKDTSSYVGVNDKITARDNLIFLQNWFVKFPHYRNRSLFIVGESYAGHYVPQLAELMLEFNRKEKLFNLKGIALGNPVLEFETDFNSRAEFFWSHGLISDVTFQMFTSVCNYSRYVREYYSGAVSPMCSRVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHARLVGVTRWSACSNVLDYELRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRKLVHQLARKLRLRTTVPYRVWFEGEQVGGWTQVYGNILSFATIRGASHEAPFSQPKRSLVLFKSFLEGRPLPEEF	467

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu04g03151	467	SUPERFAMILY	alpha/beta-Hydrolases	39	464	IPR029058	-
	Adu04g03151	467	Gene3D	-	362	460	-	-
	Adu04g03151	467	PRINTS	Carboxypeptidase C serine protease (S10) family signature	116	128	IPR001563	GO:0004185\|GO:0006508
	Adu04g03151	467	PRINTS	Carboxypeptidase C serine protease (S10) family signature	129	139	IPR001563	GO:0004185\|GO:0006508
	Adu04g03151	467	PRINTS	Carboxypeptidase C serine protease (S10) family signature	165	190	IPR001563	GO:0004185\|GO:0006508
	Adu04g03151	467	PRINTS	Carboxypeptidase C serine protease (S10) family signature	430	443	IPR001563	GO:0004185\|GO:0006508
	Adu04g03151	467	ProSitePatterns	Serine carboxypeptidases, serine active site.	179	186	IPR018202	GO:0004185
	Adu04g03151	467	Pfam	Serine carboxypeptidase	43	460	IPR001563	GO:0004185\|GO:0006508
	Adu04g03151	467	PANTHER	CARBOXYPEPTIDASE	8	465	-	-
	Adu04g03151	467	Gene3D	alpha/beta hydrolase	34	294	IPR029058	-
	Adu04g03151	467	ProSitePatterns	Serine carboxypeptidases, histidine active site.	430	447	IPR033124	GO:0004185
	Adu04g03151	467	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	8	465	IPR001563	GO:0004185\|GO:0006508
	Adu04g03151	467	Gene3D	-	315	351	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu04g03151	Adu-Chr4	119485313	119488548	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu04g03151	323	463	Calmodulin-binding Proteins	AT2G22960	28.369	4.13e-15	71.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu04g03151	K16297		-	gmx:100805130	807.364