Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03139 ATGGCAGATCATGATGCAGAATCTTCCTCCTCACATTTCATATATGATGTTTTTTTGAGCTTTAGAGGCTTCACCCGATACGGATTCACGGATCACCTCTATCATGCTCTGTGTGAGAGAGGAATCACCACCTTCAGAGATGATGAGAACCTCAGAGTTGGTGATAGAATCAGAGATACTCTTCTTGAAGCCATTGAAAGATCCAGGATGTCTATTGCTGTGCTGTGTAAGGACTATGCTTCTTCCACATGGTGTTTGGATGAACTAGTACAGATCATGAAGTGTTGGAATACTGGAAAACATCAACCAGTTTTGCCAATCTTTTATCAAGTGGAACCATCAGATGTGAGGCGCCAGAGGAACCAATATGAAAAAGACATGATGAAGCATGAAGACAGATATGGCAAAGACTCCCATCATATAAAAGCATGGAGGTCGGCTTTGTGTGAAGTGGCCGATCTAAGTGGAGTGACTTGTACAGTGAAGAGCTATGAAGGTGAGATTATCAAGAAAATTGTTCAAGAGGTCTCGGAAAAGCTTCCTCCTGAACCACTATACATTAAGCATCCAATTGGCTTTGATTCTCACTTTGAAGCGGTGGAATCACTTTGGAATATTGAATCTGACAATACCATTTGCCTGCTGGTCATTTATGGAGATGGTAACAAGACCACATTTGTTGGAGAGTTGTTTAACAAGTTCAGGCATCAATTTGAAGCTGCAAGTTTTCTTGACAAAGTATCTGAAAAATCCGCAAGAAGCGGCCTCGAAAATCTCCAAAAGATACTTATGTATGAGATGGGTGTGCATAAAAGACCTACGCGGGGAAGCACATTAACAGGATCTTCTGATATAAAACAAAGTCTCCGCGGTaaaagagtccttctggttcttgatgatgttgctactacagaacagttgaactcattggtaggaagaagtgattggtttcatcctggaagcagaattgttataacaacaagagaTGTCAATTTCCTAAATAATCAAGTGTTAGATGGATTCAAGATTGAGAAATATTGCATTAATGAAGGTGAATTTGAAGGAATGGAAGGTGCTAGATCCAATCAGAAGCATGATAAGGTCGTTGAGGAAGATATGGTGGGCTTTGTGAAGATCTTTAATTGTATAATTGAGCAGTTGAAGGAAAATAAGTCATATCTTAATGTTATCTCCGTGATAGGCATGGGAGGTTTGGGTAAGACTACCCTTGTTAAAAATATTTACAACAACAATGAGGTGAAGAAGTTGTTCCCTTATTGTGCGTGGGTTACTGTTTCTAAGGACTACAAAGCCAAGGAGCTTGTTCAAAGCCTTCTACAAGGTTTTGGGTTTTCCAAGTCAAATAATGACGAAGACTATCAAAAGAGAAAGCTCCAAAAGTTCTTAGAGGAGAAGAAGTATTTGATAGTACTTGACGACATATGGGAGCCTGAAGTTTGGGATGAAATAGAATGCTTATTTCCGGATAACAAAAATGGTAGTGCAATAGTGATAACTAGCCGGAATGATGGCGTGGCAAACTATACAGGATCAAAGTCCTACTACCCTCCATTGCTAGATAAAGATGAAAGTTGGAAATTATTCTGCAAGAAGGTGTTTAAGGAAAAGGAGTGTCCTTCTGTTTTAGAACATATGGGTAGATTAATGGTTGAAAAGTGTCGAGGTTTACCGCTTGCTATTGTAACCTTAGCAGGAGTTGTTGCTAAGAAGAGGAGAGAAACAGTTGAGTGGATAAGAATCATGCGCAACGTTCTTTGGTATGTTGACAAAGATGATGGCAGAGTAATAAATGTGTTAAAGCTCAGTTATGACAGTTTACCTCAAAGATTGAAGTCTTGTTTTCTTTTTTTGGGGGTGTATCCCGAAGATTATAAAATTAATGTGAAACGATTGAAACTATTATGGATTGCTGAAGGATTAATACAACTGCCAGAAATAGGAATATCAGATGGTCCAGAAGTAGAAGATATTGCTGAAGAGTACTTGAATGAGTTGGTGGATCGTAGCTTGGTGATGGTGGTAGAAAGAAGGAGTGATGGAGGGGTCAAAAGCTGCTGGATTCATGACCTTCTCCTTGATCTTTGCATATCAGAGAGTAGAGCTGATAAAGAAATAGAGATCTGCACGGAGAAGAACATTAGTTCCTTGGGCAATGCTAAATCTTGTAGATTGTCCCTTCGAAAAAATTATATGGTTTCACTTCAGCAGTCCGATCACTTCAGAATCCATTCTTTAATCTGCATCTGGGACGACATCAACTTTGGATGGATACGTCTATCGAGTTTCCCTTTAGCTCGCATTGTGGACCTTGGATATGGTACTCTTCATTCATCAATGGCCCGGGATTTGGAGATGTTTATCTATTTAAGATACTTGAGACTAAGGAAGAGTTACTACCAATCAGACGAGGTTGTTCCAATCTGCTCCCTTCCAAATCTAGAAACTCTAATTATTGAAAATATTGCTCTATATGGTCATAAAGATGACTATAGTTATACTTATACTCTTCCACATGAAATATGGAGGCTCAAGAAACTGAGACATCTTGAAGGGAGGCTATGCATGACGAGTAACACGATTCCAACGGACACCCCCGGAGAAGACTGTTTGCCGAATCTCCAAACCCTCCAAGTTGTCACTCTTGAAGAAGGATTGACAGTATCCTCCATTGTTAATGGGAGATTCCCCAAGCTTAGAAAATTGGGTTTGCGGTGGAATATCAAAAGTAAATATACAGAGCATCAATTATTACAAGGCTTGCATCACCTGGAAAATCTAGAAAAACTAAAACTGGTGGACTTTGAGGAATTACCATTAAAATCCCGTGAATTTCCTTCCAGTATTGCCAAGATAAACATAACGTTCTCAGATGAGGAGCTTCCATGGTTTGGGGAATTCAACTACAGTTGCTTGAATACTCTGGGAGACCTCATCAGCCTCCGTGTTCTGAAAGTAACCATGCAAGGTTTGAGCAGTGGTGACTCTCTTCGCCTTGCTGCTGGAAGCTTCCGAAATCTTGAAGTGCTTCATTTGGCAGAGAAGAATTTCAAAGAATGGATATTAGAGAAAGGTGCAATGCCATCTCTCCAGCATCTGATCATCGAATTCTGCAACTTGGATGAGCTTCCAGAGCAACTGTGGTCCTTGACTAACTTGCAAGTTGTGCATATTGTTGCCCCAAAGCCAGCATTGAGAAATAGCCTCGAACGTGTTAAGCCGGAGAATGGTTGTAAGCTCATCATAGAAACACTCGACCAGTATCTTGGGCAAGTCATTTTTCCTTTCTTAACCCACAGCTGTCTTATTAGCATTTCTAGGAGAAATTTCTATCTTTCCTATGTTTATTAA 3369 0.3871 MADHDAESSSSHFIYDVFLSFRGFTRYGFTDHLYHALCERGITTFRDDENLRVGDRIRDTLLEAIERSRMSIAVLCKDYASSTWCLDELVQIMKCWNTGKHQPVLPIFYQVEPSDVRRQRNQYEKDMMKHEDRYGKDSHHIKAWRSALCEVADLSGVTCTVKSYEGEIIKKIVQEVSEKLPPEPLYIKHPIGFDSHFEAVESLWNIESDNTICLLVIYGDGNKTTFVGELFNKFRHQFEAASFLDKVSEKSARSGLENLQKILMYEMGVHKRPTRGSTLTGSSDIKQSLRGKRVLLVLDDVATTEQLNSLVGRSDWFHPGSRIVITTRDVNFLNNQVLDGFKIEKYCINEGEFEGMEGARSNQKHDKVVEEDMVGFVKIFNCIIEQLKENKSYLNVISVIGMGGLGKTTLVKNIYNNNEVKKLFPYCAWVTVSKDYKAKELVQSLLQGFGFSKSNNDEDYQKRKLQKFLEEKKYLIVLDDIWEPEVWDEIECLFPDNKNGSAIVITSRNDGVANYTGSKSYYPPLLDKDESWKLFCKKVFKEKECPSVLEHMGRLMVEKCRGLPLAIVTLAGVVAKKRRETVEWIRIMRNVLWYVDKDDGRVINVLKLSYDSLPQRLKSCFLFLGVYPEDYKINVKRLKLLWIAEGLIQLPEIGISDGPEVEDIAEEYLNELVDRSLVMVVERRSDGGVKSCWIHDLLLDLCISESRADKEIEICTEKNISSLGNAKSCRLSLRKNYMVSLQQSDHFRIHSLICIWDDINFGWIRLSSFPLARIVDLGYGTLHSSMARDLEMFIYLRYLRLRKSYYQSDEVVPICSLPNLETLIIENIALYGHKDDYSYTYTLPHEIWRLKKLRHLEGRLCMTSNTIPTDTPGEDCLPNLQTLQVVTLEEGLTVSSIVNGRFPKLRKLGLRWNIKSKYTEHQLLQGLHHLENLEKLKLVDFEELPLKSREFPSSIAKINITFSDEELPWFGEFNYSCLNTLGDLISLRVLKVTMQGLSSGDSLRLAAGSFRNLEVLHLAEKNFKEWILEKGAMPSLQHLIIEFCNLDELPEQLWSLTNLQVVHIVAPKPALRNSLERVKPENGCKLIIETLDQYLGQVIFPFLTHSCLISISRRNFYLSYVY 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03139 1122 Pfam TIR domain 15 183 IPR000157 GO:0007165
Adu04g03139 1122 Gene3D Ribonuclease Inhibitor 716 969 IPR032675 -
Adu04g03139 1122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 624 IPR027417 -
Adu04g03139 1122 SUPERFAMILY L domain-like 694 1064 - -
Adu04g03139 1122 PRINTS Disease resistance protein signature 396 411 - -
Adu04g03139 1122 PRINTS Disease resistance protein signature 560 574 - -
Adu04g03139 1122 PRINTS Disease resistance protein signature 928 944 - -
Adu04g03139 1122 PRINTS Disease resistance protein signature 468 482 - -
Adu04g03139 1122 Gene3D - 615 704 IPR036388 -
Adu04g03139 1122 PANTHER - 367 1089 - -
Adu04g03139 1122 Gene3D - 525 614 IPR042197 -
Adu04g03139 1122 Gene3D - 178 338 IPR027417 -
Adu04g03139 1122 Gene3D - 361 521 IPR027417 -
Adu04g03139 1122 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 156 IPR035897 -
Adu04g03139 1122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 340 IPR027417 -
Adu04g03139 1122 ProSiteProfiles TIR domain profile. 13 180 IPR000157 GO:0007165
Adu04g03139 1122 Pfam NB-ARC domain 210 337 IPR002182 GO:0043531
Adu04g03139 1122 Pfam NB-ARC domain 381 611 IPR002182 GO:0043531
Adu04g03139 1122 Gene3D - 14 177 IPR035897 -
Adu04g03139 1122 SMART till_3 14 154 IPR000157 GO:0007165
Adu04g03139 1122 Gene3D Ribonuclease Inhibitor 970 1092 IPR032675 -
Adu04g03139 1122 PANTHER DISEASE RESISTANCE PROTEIN RP 367 1089 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03139 Adu-Chr4 119361156 119364804 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03139 10 329 WRKY Transcription Factor Family AT4G12020 28.615 6.21e-21 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03139 - - adu:107486187 1523.06