Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03131 ATGATCAAGAGTATTGTTGAAGAGGTCTCGGCAAAGCTTCCTCCTGAACCACTATATATTAAGCATCCAATTGGTTTTGATTCTCACTTTGAAGCGGTGGAATCACTTTGGAATATCAAATCTCATAATACCATTTGCATGTTGGTCATTTATGGAGATGGTAACAAGACCACATTTGTTGGAGAGTTGTTTAACAAGTTCCGGCATCAATTTCAAGCTGCGATTTTTCTTGATAAAGTCTCTGAAAAATCAAGAAGTGTTGATGGCCTAGAAAACCTCCAAGTAGCACTTTTGTATGAGATGGGTGTGCATAAAAAACCTAAGCTGGGAAGCACATTAAAAGGATCTTCTGATATAAAACAAAGTCTCCGCAATaaaagagtccttctggttcttgacgatgttgatgataccgaacagttggattctttggcaggaggaggtgattggttttgtcctggtagtagaattgttataacaacaagagaTGCCAATTTTCTAAATAATCAAGTGTTAGATGGATTCAAGATTGAGAAATATTGCATTAATGAAGGTGAATTTGATAGAATGGAAGCTCTCGGGTCAAATCAAAAGCAAGATAAGGTAGTCGAGGAAGACATGGTGGGCTTTGAGAATATCTTCAACGATGTAACTAAGCAGTTGAAGGAAAATGACTCACGTGTTGATGTTATCTCCATAATAGGCATGGGTGGATTGGGTAAGACTACTCTCGCTAAAAAAATTTACAATAATGAGGTGAAGAAGTTGTTCTCTTGTTGTGTGTGGGTTACTGTTTCTAAGGACTACAAAGCCAAGGAGCTTCTTCAAAGCCTTCTGAAAGGTTGTGGGTTATGGGAGTCCATTAAAGGCAAAGACATAAGCGAGGATGATCAAAAGAGCAAGGTCCAAAAGTTCTTAGAGAAGAAGAAGTATTTGATAGTGCTTGATGACGTATGGGAGCCTGAAGTTTGGGATGAGGTAAAATGCGTATTTCCGAAGAACAATAATGGTAGTGCAATATTGATAACTAGCCGTAATGATGGTGTGGCAAACTATACAGGATCAAGGTCTTACTACCCTCCATTGCTAGAAAAAGATGAAAGTTGGAAACTTTTCTGCAAGAAGGTCTTTAAGGGAGGAGAGTGCCCATCTGTTCTAGAATCTATTGGTAGATTAATGACTGAAAAATGTAGAGGCTTACCACTTGCTATTATCACCTTGGCGGGGGTTGTCGGGAAGAAGAAGAGACTAACAGTTGAGTGGATGAGAATCATGCGCAGTGTCATTTGGTATCTTGCTAAAGATAACAGTAAAGTCACCGAGGTACTGAAGCTTAGTTATGACAGCTTGCCACAACGATTGAAAACATGTTTTCTATACTTTGGGATATATCCCGAAGACTATGCAATTCCTGTGAAACGATTGGTACAATTATGGATTGCTGAAGGGTTCATACAACCGCCAGAAATAGGAATATCAGATGGTCTAGAAGTAGAAGATATTGGTGAAGAGTACTTGAATGAGTTGGTGGATCGCAGCTTGGTGATGGTGGCAAAAAGAAGGAGTGATGGAGGAATCAAAAGCTGCCGGATTCATGACCTTCTCCTTGATCTTTGCATATCAGAGAATAGAGCTGAAAAAGATATAGTGTTCTGCACGGAGAAAGACATTAGATCCCTTGGCAACTTCAAATCCTGTAGGTTGTCCCTCCGAGGGAACGACTTGGATTCATTTAATCAGTGTGATCACTCCCGCATCCATTCTTTAATGTGCTTTTGGAAATATTATGATATAAAAAACGCGTTGATCAATGTAACGAGTTTCGATTCAGCTCGCATTCTGGACTTTGGAGATCCCGCTTTTGGTTTATCATCACAAGCGGCCCAGAACTTGGGTACATTCATCCATTTAAGATACTTGAGACTACATCAGGATCCATACCTCGAGAATCATTGTGATTTCATTTGCTTCCTTGCGAATCTAGAAACTCTAATTGTTGAAGAGAATTATGATTTTTCTTTTGAGCTCCCGCATGGAATATGGAGGCTCAAGAAACTGAGACATCTTGAAGGGTGGCTAAGGATGACGAGTAAGACTGCTCCACCAGACATGTCAAAAGAAGAATGTTTGCCGAATCTCCAAACTCTCCAATTTGTCTTTTTTGAAGAAAAATTGACAATGTCCTCCGTTGTTAATGGAAGATTCCCCAAGCTGAGAAAATTGGGTTTGGCGCGGGATTTTGGAAGTGAATGCACAGAGCATGAACAATTACAAGGCTTGCATCACCTAAAAAATCTGGAAAAACTAAAACTAGTGGACTTTGGTGAATTGCCACAAGCACATGAATTTCCCTCCAACATTACCAAGATAACGATAACGACATCAGCATTTTCGTATGACTGTGGCATCAGGTACAGTTACTTGAATACTCTAGGAGACCTTACCAGCCTCCATGTTCTTAAAGTAACCTCACCAGCGGCACACCGTGGGGACTCTCTTCGCTTTGCTGCTGGAAGCTTCCCAAATCTTGAAGTGCTTCATTTGACAAGTATGCAGGTCAGAGAATGGATATTAGAGGAAGGTGCAATGCCATCTCTCCAACACCTAATCATCGGCGACTATGACTTGGATGAGCTTCCAGAGCAACTGTGGTCCTTGACTAACTTGCAAGATGTGCTTGTTTTTGCCCCAAACCCAGCATTGAGAAATAGCCTCCAACGTGTTAAGCCCAAGAATGGTTGTAAGCTCATCTTAAAACGACGGGCGGTTTATTATGCTTTACTTCTATTCATTTCTGTTTTGAGTTTGCATTATGCATATTCTGAAATGTTGCTAGTTACTCTAGTCTGA 2850 0.3884 MIKSIVEEVSAKLPPEPLYIKHPIGFDSHFEAVESLWNIKSHNTICMLVIYGDGNKTTFVGELFNKFRHQFQAAIFLDKVSEKSRSVDGLENLQVALLYEMGVHKKPKLGSTLKGSSDIKQSLRNKRVLLVLDDVDDTEQLDSLAGGGDWFCPGSRIVITTRDANFLNNQVLDGFKIEKYCINEGEFDRMEALGSNQKQDKVVEEDMVGFENIFNDVTKQLKENDSRVDVISIIGMGGLGKTTLAKKIYNNEVKKLFSCCVWVTVSKDYKAKELLQSLLKGCGLWESIKGKDISEDDQKSKVQKFLEKKKYLIVLDDVWEPEVWDEVKCVFPKNNNGSAILITSRNDGVANYTGSRSYYPPLLEKDESWKLFCKKVFKGGECPSVLESIGRLMTEKCRGLPLAIITLAGVVGKKKRLTVEWMRIMRSVIWYLAKDNSKVTEVLKLSYDSLPQRLKTCFLYFGIYPEDYAIPVKRLVQLWIAEGFIQPPEIGISDGLEVEDIGEEYLNELVDRSLVMVAKRRSDGGIKSCRIHDLLLDLCISENRAEKDIVFCTEKDIRSLGNFKSCRLSLRGNDLDSFNQCDHSRIHSLMCFWKYYDIKNALINVTSFDSARILDFGDPAFGLSSQAAQNLGTFIHLRYLRLHQDPYLENHCDFICFLANLETLIVEENYDFSFELPHGIWRLKKLRHLEGWLRMTSKTAPPDMSKEECLPNLQTLQFVFFEEKLTMSSVVNGRFPKLRKLGLARDFGSECTEHEQLQGLHHLKNLEKLKLVDFGELPQAHEFPSNITKITITTSAFSYDCGIRYSYLNTLGDLTSLHVLKVTSPAAHRGDSLRFAAGSFPNLEVLHLTSMQVREWILEEGAMPSLQHLIIGDYDLDELPEQLWSLTNLQDVLVFAPNPALRNSLQRVKPKNGCKLILKRRAVYYALLLFISVLSLHYAYSEMLLVTLV 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03131 949 Gene3D - 362 451 IPR042197 -
Adu04g03131 949 PRINTS Disease resistance protein signature 230 245 - -
Adu04g03131 949 PRINTS Disease resistance protein signature 761 777 - -
Adu04g03131 949 PRINTS Disease resistance protein signature 305 319 - -
Adu04g03131 949 PRINTS Disease resistance protein signature 397 411 - -
Adu04g03131 949 Gene3D - 7 172 IPR027417 -
Adu04g03131 949 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 192 873 - -
Adu04g03131 949 Pfam NB-ARC domain 47 179 IPR002182 GO:0043531
Adu04g03131 949 Pfam NB-ARC domain 213 448 IPR002182 GO:0043531
Adu04g03131 949 Gene3D Ribonuclease Inhibitor 594 905 IPR032675 -
Adu04g03131 949 PANTHER DISEASE RESISTANCE PROTEIN RP 192 873 IPR044974 GO:0006952
Adu04g03131 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 461 IPR027417 -
Adu04g03131 949 Gene3D - 452 541 IPR036388 -
Adu04g03131 949 Gene3D - 193 357 IPR027417 -
Adu04g03131 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 182 IPR027417 -
Adu04g03131 949 SUPERFAMILY L domain-like 531 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03131 Adu-Chr4 119323356 119326858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03131 24 163 WRKY Transcription Factor Family AT4G12020 33.333 1.10e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03131 - - adu:107486187 1850.87