Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03117 ATGACAGGTGTTAAAGTGATTTCAACGAGCACAATCCATGTAGCAAACAAGGATTCAACGGTGGAGGAGGAGATTCGGTTAACTCCATGGGATCTCCAATTCCTCCTATTTGTTCCCATTCAAAAAGGTCTTCTCTTCCGTAACAACCCCATCACTACTCCACCAACCATAATAATCCAACACCTCAAACATTCCCTTTCGTCCACCCTTTCTTTCTTCCCACCCCTCGCGGGCCGCCTTTCCGTTACGGAACACGATGACAACACTTCCTCCGTTTCCGTTATTTGCAACAACTCCGGAGCACTGTTTGTCCATGCCGTTGCAGATGAATACTCCGTTAATGATATCGTTAGTTCGGTTTACACTCCACGCTTTGTGTACTCTTTGTTCCCGCTCAACAGGGTTAGGAACCACGAAGGAATAACCAAGCCGTTGTTGGCGGTTCAAGTCACCGAGCTCAATGACGGTTTCTTCGTTGGGTGCACCATGAACCACGTTGTTGGAGACGGAACTTCCTTTTGGCATTTCATGAACTCTTGGGCCGAGATCTCACGTGGTTCGGAAGAATTGTCCAAGCCTCCCGTGCTTGAACGCTGGTTCGTTGACAGCTCCGCCTCTGCCATACGCGTTCCTTTGACGAAGGAGAAGATGATACAAAGTGGTTACGACGGTTTCGTCCCAGAACCTCAATGCGAGAGGGTTTTCCATTTCAGTAAAGACAAGATCGCTGAACTCAAGGCAAAAGCCAACGCAGAAATTGAAGGCAAAAGCAAAAACAAAATATCTTCGCTGCAAGCGCTTTTGACTCACCTGTGGAGATCCGTGGTTCGGAGCCAGGGTCTTGAGCCCGAAGAAGAAGTGAATTACGGCTTGACGATGGGTGGCAGGGGGAGAATAAAGAGTCCGGCAGTGGCGGAAAACTATTTTGGAAATGCAGTGCAGGTTGGAATAGTGCGCATGAAGGTTAAAGAGCTTCTAGGAGGAGGGCTTGGAAAGGGTGCGTTGGAGATGAACAAGATAGTTGGTTTGCACACGGAGGAGAAGATGAAGAGCTACTATAAGGGTTGGGCGGAGAACCCTAGGTTTCTGACGATGCGAGGTTTGGAGGGCAACAATGCTGTAGTGACAAGCAGTTCGCCAAGGTTTGATGTTTATGGGAATGATTTCGGGTGGGGGAAACCGGTGGCGGTGAGAAGCGGAGCCGTGAACAAGAGCCATGGTAAGATAACGGTTTATGCTGGAGCGGAAGATGGTGTTGACATTGAGGTTTGTCTTTCCTATGAGATATTGGAAGCTATGGGTAATGACCCTGGATTCATGGATGCCGTCTCTCGCTCCGCCACCTAA 1347 0.49 MTGVKVISTSTIHVANKDSTVEEEIRLTPWDLQFLLFVPIQKGLLFRNNPITTPPTIIIQHLKHSLSSTLSFFPPLAGRLSVTEHDDNTSSVSVICNNSGALFVHAVADEYSVNDIVSSVYTPRFVYSLFPLNRVRNHEGITKPLLAVQVTELNDGFFVGCTMNHVVGDGTSFWHFMNSWAEISRGSEELSKPPVLERWFVDSSASAIRVPLTKEKMIQSGYDGFVPEPQCERVFHFSKDKIAELKAKANAEIEGKSKNKISSLQALLTHLWRSVVRSQGLEPEEEVNYGLTMGGRGRIKSPAVAENYFGNAVQVGIVRMKVKELLGGGLGKGALEMNKIVGLHTEEKMKSYYKGWAENPRFLTMRGLEGNNAVVTSSSPRFDVYGNDFGWGKPVAVRSGAVNKSHGKITVYAGAEDGVDIEVCLSYEILEAMGNDPGFMDAVSRSAT 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03117 448 Gene3D - 1 219 IPR023213 -
Adu04g03117 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 442 - -
Adu04g03117 448 Gene3D - 220 434 IPR023213 -
Adu04g03117 448 Pfam Transferase family 4 436 - -
Adu04g03117 448 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03117 Adu-Chr4 119233779 119235302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03117 60 428 Monolignol Biosynthesis Gene Families AT5G48930 27.949 7.53e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03117 - - pvy:116114536 480.715