Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03096 ATGCGCAATCTGCACCATCGAAATCTCATGAAGATCATAGGTTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGACGACTTTGGCATTGCCAAATTGCTTGGCGAGAGACAATCCAAAGAATATACCAAGATCATGGCTACAGTTGGCTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTGTCACGTGCAATTGATCGAGTTGTGGATTCCAACTTGTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACTGGCCTTGAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGGATGATATTACTGCATCACTGAACAAAGTTAAGGCCAAGTTTCTTAAAGCTAATGACAAGGATGTCGTTCGGTTTTGTAGAAAATGA 651 0.3932 MRNLHHRNLMKIIGCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALDDFGIAKLLGERQSKEYTKIMATVGYIAPEFGSKGIISTKGDVYSFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLSRAIDRVVDSNLLQDEGHHHVDDIIASTSSILKLALNCCEDLPEERMNMDDITASLNKVKAKFLKANDKDVVRFCRK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03096 216 Gene3D Transferase(Phosphotransferase) domain 1 62 200 - -
Adu04g03096 216 Pfam Protein kinase domain 52 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03096 216 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 62 - -
Adu04g03096 216 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g03096 216 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 62 206 - -
Adu04g03096 216 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 1 62 - -
Adu04g03096 216 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 62 206 - -
Adu04g03096 216 Gene3D Transferase(Phosphotransferase) domain 1 1 61 - -
Adu04g03096 216 SUPERFAMILY Protein kinase-like (PK-like) 1 198 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03096 Adu-Chr4 119124140 119125203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03096 1 206 Receptor kinase-like Gene Family AT3G47570 32.031 2.16e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Adu04g03096 Pkinase 5.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03096 - K13420 ahf:112754658 387.111