Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03081 ATGTTTCCTTCTAGTTTCGGTAGTTATAGCTCTTACCCTTGTTACCCTTCATCTTCTTCTTCTTCACCATACCCTCCTTTCCCTTTCTTTAACCCTGAAAACAATAATAATGGTGCTAATAATTCAAACAACAACAACAGCAACAACAACAACACTTTCCTTCATGATCCAATTTCTAATAATGCTACTACTACTACTACTGTTATTCCTTACCATCATCATGCTCCAACAATCCCAGAAAGTGCACTGATGACGAATTTGGCAGTGGCTGATGCAATGTTCAAGCAAGAGTACTTCACTGCTGCTGCTGCTGGTGGTTCTTCACACCATCATCATCACCATTATGGCATGTCAAGTTTGATAACAAAGAGGCCAGCACCAAAGAAAGATAGGCACAGCAAGATTCACACTTCTCAGGGCTTGAGGGACAGAAGGGTGAGGCTTTCTATTGAGATTGCACGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGATAAGGCCAGTAACACTCTTGAGTGGCTCCTAACAAAGTCAAAGAGAGCAATTAAGGAGTTAGCTAGAAGCAAGAACAGTAGCAGTGGTAATAACAATGGTGGGGTTGCCAATAACAGCTTCTCTTCTTCCTCTTCTGATGGGGCTGATGATGATGAAGTTGATTCAGTCATCAACCAACAACAACTCACTGATAATATTGATGGGGGTGTGGATTCATTGGAGAGGAGGCTGAGAAGGGATCAACAGAAGGAGGAAGAATCAAGGGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTAGCAAGATGTGCAACAGTGAGAAGGTGCAAGACTTGAAGAAGAAAAGCCCTGCAATGGTAATGGAAGAAGATCCTCAGATTCTAATGCAGCATCAACAATTGAGGGCACCAATGATTCAACCTCTTGAGGAATCTTCAATGAGATCATCACCAAAGCTGTTTCAGCCTCATCATCTTGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAAGTAGTGAAGTCCCCAGAGATGATTTCAATGTTATTGAGGAATCCATTGTGATAAGGAGAAAGTTGAAGCAATCTTTGATGTCTTCTTCTTCTTCTTCTTCCAATAATAATCACCATCAAAATCATAATGTTATCCCTAAAGAAGCAACAAACTTCAACAACAACAACAGTGACTACCACTGCTTTCCCAATTTATCATCACCAAATTGGGAAGCTAATGCTTCTGCTGCCACTAATAATGGCCGCTCCAATGTTTGCACAATATCAAGCATGAATCTGTCTACAAGGCTTCAGATCTTTGGAAAGTCTTGGGAAGAGTGCACCAATCCCCACCTATGA 1368 0.4203 MFPSSFGSYSSYPCYPSSSSSSPYPPFPFFNPENNNNGANNSNNNNSNNNNTFLHDPISNNATTTTTVIPYHHHAPTIPESALMTNLAVADAMFKQEYFTAAAAGGSSHHHHHHYGMSSLITKRPAPKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLLTKSKRAIKELARSKNSSSGNNNGGVANNSFSSSSSDGADDDEVDSVINQQQLTDNIDGGVDSLERRLRRDQQKEEESRAKMKESREKARARARERTSSKMCNSEKVQDLKKKSPAMVMEEDPQILMQHQQLRAPMIQPLEESSMRSSPKLFQPHHLAAAAGGGGGGGSSEVPRDDFNVIEESIVIRRKLKQSLMSSSSSSSNNNHHQNHNVIPKEATNFNNNNSDYHCFPNLSSPNWEANASAATNNGRSNVCTISSMNLSTRLQIFGKSWEECTNPHL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03081 455 Coils Coil 236 267 - -
Adu04g03081 455 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 306 IPR005333 GO:0003700
Adu04g03081 455 MobiDBLite consensus disorder prediction 235 277 - -
Adu04g03081 455 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 23 306 - -
Adu04g03081 455 Pfam TCP family transcription factor 127 278 IPR017887 -
Adu04g03081 455 MobiDBLite consensus disorder prediction 187 277 - -
Adu04g03081 455 MobiDBLite consensus disorder prediction 31 55 - -
Adu04g03081 455 MobiDBLite consensus disorder prediction 188 212 - -
Adu04g03081 455 MobiDBLite consensus disorder prediction 110 141 - -
Adu04g03081 455 MobiDBLite consensus disorder prediction 28 55 - -
Adu04g03081 455 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 344 454 IPR005333 GO:0003700
Adu04g03081 455 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 344 454 - -
Adu04g03081 455 ProSiteProfiles TCP domain profile. 128 186 IPR017887 -
Adu04g03081 455 ProSiteProfiles R domain profile. 258 275 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03081 Adu-Chr4 119008471 119010431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03081 124 311 TCP Transcription Factor Family AT1G67260 39.320 7.95e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu04g03081 TCP 3.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03081 - - aip:107637396 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03081 04 119008471 119010431 Adu01g03112 01 102686666 102688342 ECH
Adu04g03081 04 119008471 119010431 Adu04g03081 04 119008471 119010431 ECH