Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03031 ATGCAGATGAGTTCACATCTCACTCCAATGGACAGAGAAGCCAGAGTCCTAAGGTATAGAGAGAAGAAGAAGACAAGAAAATTCGAGAAGACCATAAGGTATGCATCAAGAAAGGCCTATGCAGAGACTCGGCCGCGAATCAAAGGCCGATTCGCCAAGAGAACAGATGTTGAAGCTGAAGTTGATCAGATGTTCTCCACACCATTGATTACAGAAGTTGGTTATGGCATTGTTCCTTCATTCTGA 246 0.439 MQMSSHLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTPLITEVGYGIVPSF 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03031 81 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 1 81 - -
Adu04g03031 81 Pfam CCT motif 12 54 IPR010402 GO:0005515
Adu04g03031 81 ProSiteProfiles CCT domain profile. 12 54 IPR010402 GO:0005515
Adu04g03031 81 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 1 81 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03031 Adu-Chr4 118476488 118476733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03031 2 81 C2C2-CO-like Transcription Factor Family AT3G02380 77.500 8.44e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu04g03031 CCT 6.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03031 - - ahf:112744683 152.91